Os05g0477900

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Revision as of 10:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0477900| Description = Similar to Nonspecific lipid-transfer protein 1 (LTP 1) (Major allergen Pru d 3)| Version = NM_001062379.2 GI:2976046...")
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Gene Name

Os05g0477900

Description

Similar to Nonspecific lipid-transfer protein 1 (LTP 1) (Major allergen Pru d 3)

Version

NM_001062379.2 GI:297604658 GeneID:4339108

Length

762 bp

Definition

Oryza sativa Japonica Group Os05g0477900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23555237..23555998

Sequence Coding Region

23555237..23555616,23555989..23555998

Expression

GEO Profiles:Os05g0477900

Genome Context

<gbrowseImage1> name=NC_008398:23555237..23555998 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23555237..23555998 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgcccgcggcgaggagcgggtggccggcggcggcggcggtcctggtggtggtgctggtgctgtcctcgccgccggggactagcacggtggtggtggcgagggcggcgctgtcgtgctcgacggtgtacaacacgctgctgccgtgcctgccgtacgtgcagtcgggaggggcggtgccggcggcgtgctgcggggggatccggagcgtcgtggcggcggcgcgcaccacggccgaccgccgcgccgcctgcacctgcctcaagaacgtcgccgccggcgccgcgggcgggccatacatcagccgcgccgccggcctgcccggcaggtgcggcgtctcggtgcccttcaagatcagccccaacgtcaactgcaacgcggtaaactga</cdnaseq>

Protein Sequence

<aaseq>MVPAARSGWPAAAAVLVVVLVLSSPPGTSTVVVARAALSCSTVY NTLLPCLPYVQSGGAVPAACCGGIRSVVAAARTTADRRAACTCLKNVAAGAAGGPYIS RAAGLPGRCGVSVPFKISPNVNCNAVN</aaseq>

Gene Sequence

<dnaseqindica>1..380#753..762#atggtgcccgcggcgaggagcgggtggccggcggcggcggcggtcctggtggtggtgctggtgctgtcctcgccgccggggactagcacggtggtggtggcgagggcggcgctgtcgtgctcgacggtgtacaacacgctgctgccgtgcctgccgtacgtgcagtcgggaggggcggtgccggcggcgtgctgcggggggatccggagcgtcgtggcggcggcgcgcaccacggccgaccgccgcgccgcctgcacctgcctcaagaacgtcgccgccggcgccgcgggcgggccatacatcagccgcgccgccggcctgcccggcaggtgcggcgtctcggtgcccttcaagatcagccccaacgtcaactgcaacgcgtacgtgaaaaccaaaaatcaaattaacctctactagtagtactacctccgtcccaaaataagtgtagccgtggatattcgtgtccaacgtttgaccgtccgtcttatttgaaaattttgtgaaaaatttaaaaatatttagtcacacgtaaagaactattcaagttttattatctaatagcaataaaaatactaatcataaaaattttttaaatgagacgaacggtcaaacgttaaacgtgaatagtgtaaaactacacttattttaggacggagggagtacttacttttttttccccttcgttttttgcgtgaaatttgttggtgtttttggaacggttttaacgtgttggttctggacttctggtgcagggtaaactga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0477900, RefSeq:Os05g0477900