Os09g0408800

From RiceWiki
Revision as of 20:59, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0408800

Description

Protein kinase-like domain containing protein

Version

NM_001188902.1 GI:297726934 GeneID:9271360

Length

5567 bp

Definition

Oryza sativa Japonica Group Os09g0408800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15117324..15122890

Sequence Coding Region

15117324..15117798,15121718..15122142,15122429..15122890

Expression

GEO Profiles:Os09g0408800

Genome Context

<gbrowseImage1> name=NC_008402:15117324..15122890 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15117324..15122890 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagccccgcgagctcctggagcgcatcgcacggccgttcagctcgtcgtcctcccgccgcggcgggggcgcggagcggcggcggcgggaggaggaggaggcggacctggaggcgatcgcggcgagggagcagcgcgcgttccggtacgaggccctgagcgccgcgacgcgggggttctccgagcggcagaagctcgggcagggcgggttcggccccgtctaccgcggccgcctcgccgacggccgggaggtcgccgtcaagcgcctcggcgccgggtcccgccagggcgcccgcgagttccgcaacgaggccaccctcctctcccgcgtccagcaccgcaacgtcgtcaacctcatcggctactgcgcccacggccccgacgacaagctcctcgtctacgagtacgtccccaacgagagcctcgacaagatcctcttctcctcccctccgccgccgccccgaaacttccactcgggcagcagcagcgacggcgagaggcggcggcggcgggaggagctgacgtgggcgcggcggcacgaggtggtggtgggcgtggcgcgcgggctgctgtacctgcacgaggacgcgcacacgcccatcatccaccgcgacatcaaggccagcaacatcctcctcgacgaccgctgggtccccaagatcgccgacttcggcatggcccgcctcttcccggaggccggcgacggccgctcccacgtccagacccgcgtcgccggcaccaacggctacatggcccccgagtacctcatgcacggcgccctctccgccaaggccgacgtcttcagcttcggcgtcgtcgtcctcgagatcgtctccggccacaagaactcctccttcgtccctccccccgactccgacgccgacaacctcctcgatcacgcgtggaggctgtacaagaaggggaggagcatcgagctgctcgacccggcggtgaagtcggcggcggcgacggagcaggtggagctgctggtgcggatcgggctgctgtgcgtgcaggccgacccgcggatgaggccggacatgaagcgggtggtgatcatcctgtccaagaagcagagcacgctggaggagccgacgcggccgggcgtccccgggtcgcggtaccggcggaggtcgtacggcacgcgcggcggcggcggcggctcccacttctccgtcgggtccacgtccgggaccagctcgccgtcgacgtccaccaccgcgtcgcacgccaccacgtcggccgcgtccaacgccatgacgacgacgacgtcgagcacccacaccatgcggagccaggggctccccttgcaccgggaagagagaggagtggaattgaagaaagatgatgaaagcggctga</cdnaseq>

Protein Sequence

<aaseq>MKPRELLERIARPFSSSSSRRGGGAERRRREEEEADLEAIAARE QRAFRYEALSAATRGFSERQKLGQGGFGPVYRGRLADGREVAVKRLGAGSRQGAREFR NEATLLSRVQHRNVVNLIGYCAHGPDDKLLVYEYVPNESLDKILFSSPPPPPRNFHSG SSSDGERRRRREELTWARRHEVVVGVARGLLYLHEDAHTPIIHRDIKASNILLDDRWV PKIADFGMARLFPEAGDGRSHVQTRVAGTNGYMAPEYLMHGALSAKADVFSFGVVVLE IVSGHKNSSFVPPPDSDADNLLDHAWRLYKKGRSIELLDPAVKSAAATEQVELLVRIG LLCVQADPRMRPDMKRVVIILSKKQSTLEEPTRPGVPGSRYRRRSYGTRGGGGGSHFS VGSTSGTSSPSTSTTASHATTSAASNAMTTTTSSTHTMRSQGLPLHREERGVELKKDD ESG</aaseq>

Gene Sequence

<dnaseqindica>1..475#4395..4819#5106..5567#atgaagccccgcgagctcctggagcgcatcgcacggccgttcagctcgtcgtcctcccgccgcggcgggggcgcggagcggcggcggcgggaggaggaggaggcggacctggaggcgatcgcggcgagggagcagcgcgcgttccggtacgaggccctgagcgccgcgacgcgggggttctccgagcggcagaagctcgggcagggcgggttcggccccgtctaccgcggccgcctcgccgacggccgggaggtcgccgtcaagcgcctcggcgccgggtcccgccagggcgcccgcgagttccgcaacgaggccaccctcctctcccgcgtccagcaccgcaacgtcgtcaacctcatcggctactgcgcccacggccccgacgacaagctcctcgtctacgagtacgtccccaacgagagcctcgacaagatcctcttctcctcccctccgccgccgccccgaaacttccactgtgagtactccaatttcttcttccttcgccattgccttccgcaaaattttcaccgcgtgaacggaaccagtttaatcatccgatggacgcgtcgttttttttttttttttggggatcggattatcagttcaatgcttggaaaagtcgcgtgcactgtttcttgttgctaggacagctcattgcttgcgtcagcgggtggtcatcaccgatgcatcgatctatctatctaacaaattaaaatacggctgctactagatgctttgctgttgctgacaaagctcttctcttaacaattactactagctcactgcatttgcacactgtggcacaattatagttttgagttgcatacttgcattatctggagtcttagagataaaatcggattaatcaggcatggaaaatttgaggcagatttgttactacaagatagggcatatgttcatttgttcgttcttgaaaaaattgtgtcttgcatttcccaactgtttgttttccctgtttatgagatagtagtagcttccataggaacctggaaaaactcttccattcattcaaaactagtatgcttaactgttcttgtacgtttcaagattcctcccaaattctcttaaatgaaattcctcccaaattaaaattggaagcatctctctggatattagtggttgtttggcttaccaaaaagaaaaatagaaactcaaggaaccatcaacccatttggtttgttgaataaaacccagcattcccagcaaaccaccatttggttacaaggaatgggactgtgatagaaaaatgagtgaaggtttaggatggaatgagatgagaagaattgtatggttaggataaaaactatcctttgatgggtaatatattctttttccaagcccatttgccaaacgcctcccaaagtttttgttaggcaaagccaactaaagctcacacacttccaaaatcttaacaacaacaaaagcatagtttatgaaaatttggggataacttgcattattacattagtaataaaccaaataggccacggatagcttggtgcattagacattcaataactatggcacagtgatggttgtggatgaccagagtcgttgacaagtacagcgacgcgtcgtctccacatcgctaccctgttgggattttggaagaagacgcagcagtcacagaagccgtgtcgtactagtagcagtaccgagtccaagatcgatctatcatcagcaaccacatctatgaactttggccaaggcttctgatcaatcacacgatcaaagtctctactttgcaaaattcaatcacataatcaaaagtctattttgcaaaatcgcaaaggcaggacttcatctatgaactttggccaaggcttctgatcaatcacataatcaaagtctctagtactttgcaaaattcaatcacctaatcaaatagtctattttgcaaaattgcaaaggcagggcttctcggctgttttcctattaggcacgcgtgcgattttaggaagccagctggctgccggtgccggctctaacctcagtcctcagaatgtactgcacgtaacaaactctcctgctccaagtaattgatcttttataataaggttgcagtagcgatcttgttatgattcgcctggttttggtcgcatgcgctaatttctttctctgaccaaacctctagtattagttgagatgagaattcaggtcgcgtttatccatttcttcttgcttttgatttctcgtgcatttctagaagcggcattctgctgctgcagatgagacacacacacacacacatgattgcgtatggatgcatgagaaatcgatcctgcaaatgctgctctgctttgccttttcgctaaaagggcgattttcatcatgcgtggtggtgtgcctttctggtcagagtgagttcgttcagggaatataagattcgacggactaacaaaccgtggggccctcagaagagaaattatgttcgactgattggtcagaattcagaaaccaaatcattcttctcacgctttgttctttcttctgtctgattgcttcctctttctcaaaggcggtgtgtgttttcaccatatccccgtagtggttttgacgattttgcacactgcaaaatatattcttgtgcctcctttgaaacaaagtaattttgtataatttatacgataatttgagttaattcacatgaaaaatcataagaattctccctgtgggtcctggatgcacatacagtgtgaaccagcttctcaacacccatgcacatcatcttcagttattattattattattaaaagttcattggtttgaccaagtcaaccctcatctctgggtcaaaaaagtcttctccgttgcatgcccaacaccacacacctactctttcgttttcctttccctcctggtggttttcctattaggattagttgggtcatttggggtctccacaagctagtagtactactagtactacctacaacaacaagtaggtgtaccgggctaccagcgacctagccataggataagagcaggtataaaagcaggctataagccaactataaacatattttaaagagataaaggaagagagaagagcagtgggctacatatctgtagccagctacagcacagactccaagacgtaatgtgtatatgacatgcggaaccttatattaatagtatagtaattaactagtgtatgaattagctattacattggctatagatgatttgagctaatagtaggctatactattaaacttgctctaaattatgtatagccaatataatagtcaattcatataatacttgcttactatactattaatacatagtcccacctgttatacacatattacgtcttggagtctgtgttgcagctgactgtagatatgtagcctgctactcttctctctcttcttttatttctttaaaatatctttatagctgacttatatagtatgccactgtatcttcctttatctttttaaaatatctttatagcttgtttatagtctgctatagtatctgctctaacgtgcttgactcgtgtgcacggccggaccggggggccaactagccaaagcccaaagtactcgcaaacacgcctctgctgtctgctctcctagtggttcgtttggtcctgggtgacgcagaggcgtcgccgtctgaatatctgtgagaagccgatagcagtagagcgcgtcggtaggaaatacgagtacgtggacacgcatgtggcgccaaacttgctgccgtgcggactgggggcgagaggggaacaaacggacgctggtttttcagggctgcatacggtgggcgggctgcctggcggctggatccgtgggtcaacagctgaaaaggctgcacgtgcacacgtgtgttctcacggtgcgcaaacgacgtgagcaataatagtgtgacggaagtgtaccagaaaaaggggaaattatgtgctgcaaatctccttatgtattgaagacttagaaaaactaccattagatcgaaaaatggatagtttaagattcgtttacattattatgagtaaaaattttactccgaataaatttgagtaaatctgcgagtaaaatttttcattcgtaatggcgtgaacaaatcttagaatgtagaaagagttttggggttgatcagttgatggatgtaaataaaatttgatttatattagggacctaaagtaaacctttttcccgatctttaattgtcctgtcctgcattgggcccataacggcccatatgttttccctgttttgcttcgttgttgcgagaactgcggtttctgaatcttggcatcatgccaagaaagggttcatgatcgttgcattccatgtactactactactgcatttgtatggagtaataacgagagttttggctttggtggatgcgtggtggatcagcgggcagcagcagcgacggcgagaggcggcggcggcgggaggagctgacgtgggcgcggcggcacgaggtggtggtgggcgtggcgcgcgggctgctgtacctgcacgaggacgcgcacacgcccatcatccaccgcgacatcaaggccagcaacatcctcctcgacgaccgctgggtccccaagatcgccgacttcggcatggcccgcctcttcccggaggccggcgacggccgctcccacgtccagacccgcgtcgccggcaccaacggctacatggcccccgagtacctcatgcacggcgccctctccgccaaggccgacgtcttcagcttcggcgtcgtcgtcctcgagatcgtctccggccacaagaactcctccttcgtccctccccccgactccgacgccgacaacctcctcgatcacgtacgtcctctccatccatcatcttaatttctccatcgatcatcttaatttctctcttaaagttaatctgttttaagtctgatcaaatttatagaaaaaagtagtaatatttttaacctaagacaaatttattaagaaaatatattcaattattaatttgataaaattaatttagtattataaatattactatatttatcgttaaatttaaaacagacggagggagtactcatcaacttctcttcgatctctcattcatggcgatggatttgcttcgtgtgggcaggcgtggaggctgtacaagaaggggaggagcatcgagctgctcgacccggcggtgaagtcggcggcggcgacggagcaggtggagctgctggtgcggatcgggctgctgtgcgtgcaggccgacccgcggatgaggccggacatgaagcgggtggtgatcatcctgtccaagaagcagagcacgctggaggagccgacgcggccgggcgtccccgggtcgcggtaccggcggaggtcgtacggcacgcgcggcggcggcggcggctcccacttctccgtcgggtccacgtccgggaccagctcgccgtcgacgtccaccaccgcgtcgcacgccaccacgtcggccgcgtccaacgccatgacgacgacgacgtcgagcacccacaccatgcggagccaggggctccccttgcaccgggaagagagaggagtggaattgaagaaagatgatgaaagcggctga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0408800, RefSeq:Os09g0408800