Os05g0478000

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Revision as of 10:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0478000| Description = Zinc finger, RING-type domain containing protein| Version = NM_001062380.1 GI:115464490 GeneID:4339109| Length = 888...")
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Gene Name

Os05g0478000

Description

Zinc finger, RING-type domain containing protein

Version

NM_001062380.1 GI:115464490 GeneID:4339109

Length

888 bp

Definition

Oryza sativa Japonica Group Os05g0478000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23557342..23558229

Sequence Coding Region

23557392..23557961

Expression

GEO Profiles:Os05g0478000

Genome Context

<gbrowseImage1> name=NC_008398:23557342..23558229 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23557342..23558229 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagtggtgttgcggcgccggcgccgagcgtgttcgaggcggcgcggccggcgttggagagcggtggcggcggtggaggcgcgccgccgccggggagggcggacgcgagcttcgacaccaacatggtgatcatcctggcggcgctcttcttcgcgctgctgttcgccatcgggctcaactcgctggcgcggtgcgcgctccggtgcgggggccggggcgcggccgccgcaggcggcggcggcggcggaggaggaggaggagcggcggcggccggggtggggtgcggcggcatcaagaagcgcgcgctgaggagcatcccggtggaggtgtactgcggcggggaggagacggcggagaccgacgtgtgcgccatctgcctcggcgagttcgcggacggcgagaaggtgcgcgtgctgccgcggtgccggcacgggttccacgtccggtgcgtcgacgcctggctggtctcgcacggctcctgcccgacgtgccgccgccaggtgatcggcggcggcgggagcacgccgccgccggacagcgacaccatcgccgtggtcgtagcatga</cdnaseq>

Protein Sequence

<aaseq>MASGVAAPAPSVFEAARPALESGGGGGGAPPPGRADASFDTNMV IILAALFFALLFAIGLNSLARCALRCGGRGAAAAGGGGGGGGGGAAAAGVGCGGIKKR ALRSIPVEVYCGGEETAETDVCAICLGEFADGEKVRVLPRCRHGFHVRCVDAWLVSHG SCPTCRRQVIGGGGSTPPPDSDTIAVVVA</aaseq>

Gene Sequence

<dnaseqindica>51..620#acctccatctatctacctggagttagtgtaggtgagaggttaggtcgatcatggcgagtggtgttgcggcgccggcgccgagcgtgttcgaggcggcgcggccggcgttggagagcggtggcggcggtggaggcgcgccgccgccggggagggcggacgcgagcttcgacaccaacatggtgatcatcctggcggcgctcttcttcgcgctgctgttcgccatcgggctcaactcgctggcgcggtgcgcgctccggtgcgggggccggggcgcggccgccgcaggcggcggcggcggcggaggaggaggaggagcggcggcggccggggtggggtgcggcggcatcaagaagcgcgcgctgaggagcatcccggtggaggtgtactgcggcggggaggagacggcggagaccgacgtgtgcgccatctgcctcggcgagttcgcggacggcgagaaggtgcgcgtgctgccgcggtgccggcacgggttccacgtccggtgcgtcgacgcctggctggtctcgcacggctcctgcccgacgtgccgccgccaggtgatcggcggcggcgggagcacgccgccgccggacagcgacaccatcgccgtggtcgtagcatgatgtgagagacaaaagatatactactccagtagtcttcgtagctagctgggctcctgcctggcctctttggcgccaatcccttctaaaaaatatctcgctgatcgatctgatctctccggatattttccggcgaacggctagtgactagtgactcatcagcttgttgtggcgaatgtattgacgggtgcccaattggcccaaattggtcactgtatatacacgttcaacatcgccgtcccgaaatgtactgtaccactaacattttcgt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0478000, RefSeq:Os05g0478000