Os05g0478300

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Revision as of 10:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0478300| Description = Protein kinase domain containing protein| Version = NM_001062382.2 GI:297604662 GeneID:4339111| Length = 3169 bp| D...")
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Gene Name

Os05g0478300

Description

Protein kinase domain containing protein

Version

NM_001062382.2 GI:297604662 GeneID:4339111

Length

3169 bp

Definition

Oryza sativa Japonica Group Os05g0478300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23571246..23574414

Sequence Coding Region

23571246..23572537,23572953..23574414

Expression

GEO Profiles:Os05g0478300

Genome Context

<gbrowseImage1> name=NC_008398:23571246..23574414 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23571246..23574414 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaccgccaccgccgccctcctcctcctcacgctcgccgccatcctcgccgcggcgggcgccgtgaacgacgacgtgctcgcgctggtggtcttcaagtccggggtgtccgacccggggggcgtcctggcggcgtggtcggaggacgccgaccgcgcctgcgcctggcccggggtgtcgtgcgacgcgcgggcggggcgcgtcgacgccgtcgcgctcccgtccgcggggctctccggccgcctcccgcggtccgcgctgctccgcctcgacgcgctcctctccctcgcgctccccgggaacaacctctccggcccgctccccgacgcgctgcccccgcgcgcccgcgcgctcgacctctccgccaactcgctctcaggctacctccccgccgcgctcgcctcctgcggctccctcgtgtcgctcaacctctccgggaacctcctctcgggccccgtccccgatggcatctggtctctcccgtcgctccggtcgctggacctctccggcaaccagctcgccggaagcgtgcccgggggattcccacggagcagctcgttgcgcgtgctggatttgagtcgcaaccttctcgaaggggagattccggcggacgtcggagaggccgggctgctcaaatcgttggatgtcgggcacaacttgttcaccggcgagctgccggagtcgctgcgtgggctcaccgggctgagctctcttggagcgggcgggaatgcgctcgccggcgagctcccggggtggattggtgagatggcggcgctggagacgctagatttgtccggcaaccgcttcgtcggcgccatcccagacggcatttcgggctgcaagaacctggtcgaggtcgacctcagcggcaacgcgctcaccggggagctcccgtggtgggtgttcggcctggcagcgctgcagcgcgtctccctcgccggcaacgcgctttccggctggatcaaagctcccggtgacaatgcctcagcgctgcaagaactggacctgtcgggcaatgccttctccggcgtgatcccgcgcgagatcgcgagcctttcaaggttgcagcatctgaacctgtcctcaaacaccatgtcggggaagcttccggtgagcattggacggatggcattgttggaggtgatggatgttagcagaaaccagctgagcgggggcgtcccaccggagatcggcggtgcggcggcgctccggaagttgctgatggggagtaattcactcaccggaatcattccgccgcagattgggaattgcagaaacctgattgcattggatctatcacataacaagcttacagggcctattcctgcgaccataggcaacctcaccggtctccaaatggtcgatttctcggagaacaagctgaatggaaccctgccagtggagctctctaaactcgcaaaccttcgagtcttcaatgtctcccacaatctactatcaggaaacctccccatcagtcacttttttgatactatccctgattctttcatcttggacaatgctggactttgcagctcacagagagataattcctgcagcggcgtcatgccaaagccaattgtatttaaccctaatgcctcatcagatcccctctcagaggcttccccaggtgcccccagcagccagcaccacaagaagatcatattgagcatctcaacactgattgccattgtgggtggagcgttgattattgttggcgtggtaactatcacagtgctcaaccgtcgtgtccgctctgcggcctcccactctgcagttcccactgcactatcagatgattatgatagccaatccccagagaatgaagccaaccctggcaagcttgtcatgtttggcaggggcagcccagatttcagtgcaggtgggcatgctttgctgaataaggattgcgaacttgggcgaggaggctttggcacagtctacaaggcagttttaagagatggccagcctgtggccatcaagaagctgacagtgtcaagcttggtcaagtcagaggacgagttcaaacggcaggttaagcttcttggaaaggtgcggcaccataatgttgttaccctcagaggcttctactggacttcatcactgcagctcctcatctatgactttgtgcctggcggtaacttatatcagcacctgcatgagtcctcagcagagagatcggtttcatggatggaaaggtttgacataataatcggcgtagcccgagcccttgcgcacttgcaccgccatgggataatccactataatctgaagtcaagcaatgtcttgctagatagcaacggcgagccaagggttggtgactatggccttgtgaagctgctgcctatgctggatcgctacgtgctgagcagcaagattcagagcgcgctagggtacatggcgccggagttcacatgcaggacagtcaatgtcacagagaagtgcgacgtctatggtttcggggtgatagttcttgagatcttgacaggcaggagaccagtcgagtacctagaagacgatgtcgtcgtgctctgcgatgtggtgagagctgcactcgacgatggcagggtggaggactgcatggatccacggctatcaggtgagttctccatggaagaggctatgctgatcatcaagctgggccttgtttgcacgtctcaggtgccctcccaccggccggacatgggtgaggtagtcagcatgcttgagatggtgaggagttctcagggtaccccagaggatgatctggtttga</cdnaseq>

Protein Sequence

<aaseq>MATATAALLLLTLAAILAAAGAVNDDVLALVVFKSGVSDPGGVL AAWSEDADRACAWPGVSCDARAGRVDAVALPSAGLSGRLPRSALLRLDALLSLALPGN NLSGPLPDALPPRARALDLSANSLSGYLPAALASCGSLVSLNLSGNLLSGPVPDGIWS LPSLRSLDLSGNQLAGSVPGGFPRSSSLRVLDLSRNLLEGEIPADVGEAGLLKSLDVG HNLFTGELPESLRGLTGLSSLGAGGNALAGELPGWIGEMAALETLDLSGNRFVGAIPD GISGCKNLVEVDLSGNALTGELPWWVFGLAALQRVSLAGNALSGWIKAPGDNASALQE LDLSGNAFSGVIPREIASLSRLQHLNLSSNTMSGKLPVSIGRMALLEVMDVSRNQLSG GVPPEIGGAAALRKLLMGSNSLTGIIPPQIGNCRNLIALDLSHNKLTGPIPATIGNLT GLQMVDFSENKLNGTLPVELSKLANLRVFNVSHNLLSGNLPISHFFDTIPDSFILDNA GLCSSQRDNSCSGVMPKPIVFNPNASSDPLSEASPGAPSSQHHKKIILSISTLIAIVG GALIIVGVVTITVLNRRVRSAASHSAVPTALSDDYDSQSPENEANPGKLVMFGRGSPD FSAGGHALLNKDCELGRGGFGTVYKAVLRDGQPVAIKKLTVSSLVKSEDEFKRQVKLL GKVRHHNVVTLRGFYWTSSLQLLIYDFVPGGNLYQHLHESSAERSVSWMERFDIIIGV ARALAHLHRHGIIHYNLKSSNVLLDSNGEPRVGDYGLVKLLPMLDRYVLSSKIQSALG YMAPEFTCRTVNVTEKCDVYGFGVIVLEILTGRRPVEYLEDDVVVLCDVVRAALDDGR VEDCMDPRLSGEFSMEEAMLIIKLGLVCTSQVPSHRPDMGEVVSMLEMVRSSQGTPED DLV</aaseq>

Gene Sequence

<dnaseqindica>1..1292#1708..3169#atggccaccgccaccgccgccctcctcctcctcacgctcgccgccatcctcgccgcggcgggcgccgtgaacgacgacgtgctcgcgctggtggtcttcaagtccggggtgtccgacccggggggcgtcctggcggcgtggtcggaggacgccgaccgcgcctgcgcctggcccggggtgtcgtgcgacgcgcgggcggggcgcgtcgacgccgtcgcgctcccgtccgcggggctctccggccgcctcccgcggtccgcgctgctccgcctcgacgcgctcctctccctcgcgctccccgggaacaacctctccggcccgctccccgacgcgctgcccccgcgcgcccgcgcgctcgacctctccgccaactcgctctcaggctacctccccgccgcgctcgcctcctgcggctccctcgtgtcgctcaacctctccgggaacctcctctcgggccccgtccccgatggcatctggtctctcccgtcgctccggtcgctggacctctccggcaaccagctcgccggaagcgtgcccgggggattcccacggagcagctcgttgcgcgtgctggatttgagtcgcaaccttctcgaaggggagattccggcggacgtcggagaggccgggctgctcaaatcgttggatgtcgggcacaacttgttcaccggcgagctgccggagtcgctgcgtgggctcaccgggctgagctctcttggagcgggcgggaatgcgctcgccggcgagctcccggggtggattggtgagatggcggcgctggagacgctagatttgtccggcaaccgcttcgtcggcgccatcccagacggcatttcgggctgcaagaacctggtcgaggtcgacctcagcggcaacgcgctcaccggggagctcccgtggtgggtgttcggcctggcagcgctgcagcgcgtctccctcgccggcaacgcgctttccggctggatcaaagctcccggtgacaatgcctcagcgctgcaagaactggacctgtcgggcaatgccttctccggcgtgatcccgcgcgagatcgcgagcctttcaaggttgcagcatctgaacctgtcctcaaacaccatgtcggggaagcttccggtgagcattggacggatggcattgttggaggtgatggatgttagcagaaaccagctgagcgggggcgtcccaccggagatcggcggtgcggcggcgctccggaagttgctgatggggagtaattcactcaccggaatcattccgccgcagattgggaattgcagaaacctgattgcattgtaagtgatctcttttttttttttccaacataacttggtggcttgctgttacactagcagtagcttctactttgttttttcttgtgttagcagctagcacttgcctgctctctggttcctagtttcagatgccatggagaaagtgatgtctatgtcttattttctgtttggaagcactaagccagcaatgtcggaaccatgcctgtcctgttgctttggtcgtatcctagtgtctgtgtccttgctttttcttggatacactaaaaaaacacaagtcaaattacataagaaatttgaatgcttcttaaagaacatataaattacaatgaacaaggcaaatcatgttgcatcattactatcaaaatcttggcactatttcagctgatgtgtgtatggctcttttgtggcattgcagggatctatcacataacaagcttacagggcctattcctgcgaccataggcaacctcaccggtctccaaatggtcgatttctcggagaacaagctgaatggaaccctgccagtggagctctctaaactcgcaaaccttcgagtcttcaatgtctcccacaatctactatcaggaaacctccccatcagtcacttttttgatactatccctgattctttcatcttggacaatgctggactttgcagctcacagagagataattcctgcagcggcgtcatgccaaagccaattgtatttaaccctaatgcctcatcagatcccctctcagaggcttccccaggtgcccccagcagccagcaccacaagaagatcatattgagcatctcaacactgattgccattgtgggtggagcgttgattattgttggcgtggtaactatcacagtgctcaaccgtcgtgtccgctctgcggcctcccactctgcagttcccactgcactatcagatgattatgatagccaatccccagagaatgaagccaaccctggcaagcttgtcatgtttggcaggggcagcccagatttcagtgcaggtgggcatgctttgctgaataaggattgcgaacttgggcgaggaggctttggcacagtctacaaggcagttttaagagatggccagcctgtggccatcaagaagctgacagtgtcaagcttggtcaagtcagaggacgagttcaaacggcaggttaagcttcttggaaaggtgcggcaccataatgttgttaccctcagaggcttctactggacttcatcactgcagctcctcatctatgactttgtgcctggcggtaacttatatcagcacctgcatgagtcctcagcagagagatcggtttcatggatggaaaggtttgacataataatcggcgtagcccgagcccttgcgcacttgcaccgccatgggataatccactataatctgaagtcaagcaatgtcttgctagatagcaacggcgagccaagggttggtgactatggccttgtgaagctgctgcctatgctggatcgctacgtgctgagcagcaagattcagagcgcgctagggtacatggcgccggagttcacatgcaggacagtcaatgtcacagagaagtgcgacgtctatggtttcggggtgatagttcttgagatcttgacaggcaggagaccagtcgagtacctagaagacgatgtcgtcgtgctctgcgatgtggtgagagctgcactcgacgatggcagggtggaggactgcatggatccacggctatcaggtgagttctccatggaagaggctatgctgatcatcaagctgggccttgtttgcacgtctcaggtgccctcccaccggccggacatgggtgaggtagtcagcatgcttgagatggtgaggagttctcagggtaccccagaggatgatctggtttga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0478300, RefSeq:Os05g0478300