Os09g0416200

From RiceWiki
Revision as of 20:59, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0416200

Description

Similar to Glucose transporter (Fragment)

Version

NM_001069711.1 GI:115479164 GeneID:4347061

Length

6087 bp

Definition

Oryza sativa Japonica Group Os09g0416200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15540851..15546937

Sequence Coding Region

15540948..15541092,15544992..15545311,15545400..15546026,15546278..15546721

Expression

GEO Profiles:Os09g0416200

Genome Context

<gbrowseImage1> name=NC_008402:15540851..15546937 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15540851..15546937 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggaggcggcgtggcggcgctgggggtgaagaaggagcgggcggcggagtacaagggccgcatgacgctcgccgtcggcatggcctgcctcgtcgccgccgtcggcggcgccatcttcggctacgacatcggcatctccgggggagtgacgtccatggatccgttcctcaagaagttcttcccggtggtgttccggaagaagaacgacgacggccagaacaactactgcaagtacgacaaccagggcctctcggcgttcacctcctccctctacctcgccggcctcgtctcctcccttgccgcctcgccggtgacgaggaactacggccgccgcgccagcatcgtctgcggcggcctcagcttcctcgccggcgccacgctcaacgccgccgccgttaacctcgtcatgctcatcctcggccgcatcctgctcggcgtcggcatcggcttcggcaaccaggccgtgccgctgtacctgtcggaaatggcgccggcgcacctccgcggcgcgctgaacatgatgttccagctggcgacgacgctgggcatcttcacggcgaacatgatcaactacgggacgcagcacatcaggccgtgggggtggcggctctcgctggggctcgcggcggcgccggcgctgctgatgaccgtcggcgggctgctcctgccggagacgcccaacagcctgatcgagcgcgggcgcgtcgaggagggccgccgcgtgctggagcgcatccggggcaccgccgacgtggacgccgagttcacggacatggcggaggcgagcgagctcgccaactccatcgagcacccgttccgcaacatcctggagccgcgcaaccggccgcagctggtgatggcggtgtgcatgccggcgttccagatcctgacgggcatcaactccatcctcttctacgcgcccgtgctgttccagagcatgggcttcggcggcagcgcgtcgctctactcctcagtcctcaccggcgccgtcctcttctcctccaccatcatctccatctccaccgtcgaccgcctcggccgccgcaagctcctcatcagcggcggcatccaaatgatcatctgccaggtgatagtggcggtgatcttgggggtgaagttcgggacggacaaggagctgacgaggagctactcgatcgcggtggtggtggtgatctgcctgttcgtgctggcgttcgggtggtcgtgggggccgctggggtggacggtgccgagcgagatcttcccgctggagacgaggtcggcggggcagagcatcacggtggcggtgaacctcttcttcaccttcgtcatcgcgcaggcgttcctgtccctgctctgcgcgctcaagttcggcatcttcctcttcttcgccgggtggatcaccgtcatgaccgtcttcgtccacgtcttcctgccggagaccaagggcgtgcccatcgaggagatggtgctcctatggaggaagcactggttctggaagaaggtcatgcccgacctgccgctcgaggacggcgacagtcatcacaagtga</cdnaseq>

Protein Sequence

<aaseq>MAGGGVAALGVKKERAAEYKGRMTLAVGMACLVAAVGGAIFGYD IGISGGVTSMDPFLKKFFPVVFRKKNDDGQNNYCKYDNQGLSAFTSSLYLAGLVSSLA ASPVTRNYGRRASIVCGGLSFLAGATLNAAAVNLVMLILGRILLGVGIGFGNQAVPLY LSEMAPAHLRGALNMMFQLATTLGIFTANMINYGTQHIRPWGWRLSLGLAAAPALLMT VGGLLLPETPNSLIERGRVEEGRRVLERIRGTADVDAEFTDMAEASELANSIEHPFRN ILEPRNRPQLVMAVCMPAFQILTGINSILFYAPVLFQSMGFGGSASLYSSVLTGAVLF SSTIISISTVDRLGRRKLLISGGIQMIICQVIVAVILGVKFGTDKELTRSYSIAVVVV ICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQAFLSLLCAL KFGIFLFFAGWITVMTVFVHVFLPETKGVPIEEMVLLWRKHWFWKKVMPDLPLEDGDS HHK</aaseq>

Gene Sequence

<dnaseqindica>98..242#4142..4461#4550..5176#5428..5871#actggttcggtgtgagcgagcgagcgagatagccatatcttcgctgtgcgtcgtcgtcgtcgctgcgtggtgaattcttggggaggaggaggacgagatggcgggaggcggcgtggcggcgctgggggtgaagaaggagcgggcggcggagtacaagggccgcatgacgctcgccgtcggcatggcctgcctcgtcgccgccgtcggcggcgccatcttcggctacgacatcggcatctccggtacgtcacgtacaccaccccccatcacctcctagctcctttcgcatcggctgctcgtcagccaccatgggggtcattggagaagacaacaacttctgtgtggctttgttcaacgaacatgtcccgtgtcttatcttgctagctcgctagcggcctagcgctgtacgccgtggcccccgtggattttggagccaagtgcggctcgtgttggcccctttcgctcgccaacacgcatactctcatgccttttcgcagtttgtttgcttctcccggcgattatttgttcgcacatggatggaacgggagcgtaacacctagagtttcgctttgcgagagccttttttttctcctcccgatcaaaaggtggattggttcatagagtagtagttgagattcaatggtgtggcctttctgaactgactagctaggcgaatgattgggcgattcgtgcagcgtaggcaggcattgtgcagtggttttgggtttgcatgatccgttgatgtgatcattcctgtagcagtagaatttggaacaaattcagggaagcagaaaaactgggaaccttttacacacgcaaaagctgcttttgactacactactacacacgtggccggaatccccaccgtatctgtgtcctctttcagttcagagtgatagatatcgcggtgttgtgttttcggtcaagctgtaatcatgtcggagagatttgcttcgtaccagcaagagctgcaaattggaggttagtattagggtgtgtttagtacacgttaaaattaaaagtttgattaaaatttgaacgatgtaacggaaaagttaaaagtttgtgtgtataaaaaattttgatgtgataaaataattggaaatttgaagaataagtttggaactaaactcgttcttaggcactgaattttagcagcagtttcgtcgaaggtactacgcctggtacaaccgcgagaccttagcggccgtactggcctgatgagtggtgctcttggagttcgattcttgtggacgagggcgattgcatcatcatatccaacaattaggcgatcatttcctcgtgtgagaacaaaactatttttttttaagaaaaaaaagagaacaccaggctgaatacaccatccatagaagaccattgacttcaccaataaaagttataaaacagctttgttgctttatatttgcatgactttattatatttaacaaacaatcaactagaccttaggcattgtgaatggtgattgtttattcccaagtagtaggggataccagaccagccggttttctagcgtcaacatattcagatgagacaccatatctcctccacttcacaagacatcgctttagctaggtgtataattatctttttcatgctaatcgaaggaagaatcatttgtatgatgctaatttattcaagtgttctcatttgctgaaatgggccgtctttgatattttcatttagctgtgttttttttgtcagcggtatgacttttagtttgtcttcttgtttattttaatatgttagcatatgtttttcatgtttttccattggtagggaactaccacaatacagtttttatttttttaaaaaaagatagagcagttcatttttttcccaaaaaaacacactcaaacgggcaagttagttgtagccaatcggaccaacttgtcttcctgcccacacgcctttgtgatatgatgtcatgcctgctacagttgctctggtgacgtggactgacaacgtgtcacctcgtcttgccctagccaattacatttgcatgacaagtgggtccatgatgtcagtaacgttgagagaggtaacggaattaattgtagctttgtgaattgtgataattgtactctctaacgttgtagctatataaaattgcttgctaatgttacttgataactttgataactagttgaaaccccacgcgttgcagcgggatattttgttgagattggtggttggctggttgcatttggtaaattgaagttgtataaaaatccctcactattgaattgggccacgatcaaattagatgggcctcctatcgtgaatgtggtgtgcgatggttagactgtgttttttcatctaacggttcaaagaagatcaaatctactgatccaacgactgagaattaacgatgatgtggcacattgaggtttgaactttaggatcttaattgcacttagtgggttataactttatagtaagaaaggatttggttaataaagttacaagttcatcatctatcaatcatttttaactagccaaagtcataacttaatcaaagcggaggaaggagcgaattccacatacactactcgactcttttcccttatttcttgctttgtcatcagtgacgggtcataagttacaacccgtcagagattagtcatcagtgacggtcatgtagttacgacacgtcactgatgactcatctgtgacgggtgacaagttttaacccgtcagagatgacttatataccggtcaaagatgagttatatgtgacgggtgtttcactcgtcataggtgattttgtcatcagtgaccactaatcactgaccaaagccaaacccgtcaaaggtgagggtttaggcccgtcagagatgacctggtccggcgtagtggatagtgcaaggaggcaacgaagcttctcccttccccttcctattccctatcacgccatctcactatggctgggagaagtgatgcctcctttcattaccttcccccgcaaactgagaagaggggaacaaagtcatgtagtgtgctttgacaaggttatgacctaggcgatgcccacgtgttgagttgttctatcatcttctcgcccacgtactcgtatgatgtggtatcttgctacagtagctttggtgacatggactaccaatgtgttgccctgtctcgcctagccaagttctatttgtatggcaggtgggtccatgacgtatagtgttgagagataacaagattgtagttttgtgatagttgtatttgctaacatgagatttactctggtccaacaaaaagtatctcgaggtaccggtacctcacggtattgtagtagtcgggcctcggcacggcctaggcccggccgtgactgggccaagagtagtcgggccggtacgacctgacctacacaccgggccatgccgtgccagcccacgggccgcacatgactcgggccggctcgaaggcacgacagcccatcgtgcttttccacagaataagtctagtttccctccatcttgggctgcgacatatatatagctaaaaagtctattttccctccatcttcttttggctgtgacatataaatagctaaataagtctattttaggtctctattctttggaccatgacattaatatgtctatttttagtccctatactttgtgtgccgggcccggcctgccggcccagcgtgccggtggggaggcctaagcacgtcccggcagttggggcgtgccgtgcttgggccgggccaaaataccgtgccgtgggccaagccttcgggcctcgggccttatggccatctatacgcggtattaaattgtttccaatcgttagatctaacaatgtccatcttgtccagctagatccaacgattggatacaatttagtaccgtgaaataccggtacctcaagatactttttgttaaactgaagtaaatcttccaaattttacaatacaaaatacctcgaggtaaaaaaaattatgctacctcgaggtagcaatcgttggatggtaaaattactcgagaagctatgtttgtactgtcagttctgaagctagagcatcgcattccatcaaagatgctaaaaaaaaatatcatgtttcacctggaaatcacagttgagctccggcgatctgacaaacggttgctgcagggggagtgacgtccatggatccgttcctcaagaagttcttcccggtggtgttccggaagaagaacgacgacggccagaacaactactgcaagtacgacaaccagggcctctcggcgttcacctcctccctctacctcgccggcctcgtctcctcccttgccgcctcgccggtgacgaggaactacggccgccgcgccagcatcgtctgcggcggcctcagcttcctcgccggcgccacgctcaacgccgccgccgttaacctcgtcatgctcatcctcggccgcatcctgctcggcgtcggcatcggcttcggcaaccaggtgcgatatatgcgacatcgatgaaatgaatcgagttcttgtgcttgcgttgctttgatgctaatggtgtttgtgcttggcgtcgcaggccgtgccgctgtacctgtcggaaatggcgccggcgcacctccgcggcgcgctgaacatgatgttccagctggcgacgacgctgggcatcttcacggcgaacatgatcaactacgggacgcagcacatcaggccgtgggggtggcggctctcgctggggctcgcggcggcgccggcgctgctgatgaccgtcggcgggctgctcctgccggagacgcccaacagcctgatcgagcgcgggcgcgtcgaggagggccgccgcgtgctggagcgcatccggggcaccgccgacgtggacgccgagttcacggacatggcggaggcgagcgagctcgccaactccatcgagcacccgttccgcaacatcctggagccgcgcaaccggccgcagctggtgatggcggtgtgcatgccggcgttccagatcctgacgggcatcaactccatcctcttctacgcgcccgtgctgttccagagcatgggcttcggcggcagcgcgtcgctctactcctcagtcctcaccggcgccgtcctcttctcctccaccatcatctccatctccaccgtcgaccgcctcggccgccgcaagctcctcatcagcggcggcatccaaatgatcatctgccaggtattccccgtttcagaagtcaaactactttaaatttaattaagtttatagacaaatatagtattaatttataataccaaattagttttattaaattaataaataaatatattttcttaataaatttgtcttgggttgaaaatgttactatttttttctacaaatttaatcaaatttaaaatagtttgactttaaccaaagtcaaaatgtcttgtatatcctgatgagtttattggaaaacgcaattgcaggtgatagtggcggtgatcttgggggtgaagttcgggacggacaaggagctgacgaggagctactcgatcgcggtggtggtggtgatctgcctgttcgtgctggcgttcgggtggtcgtgggggccgctggggtggacggtgccgagcgagatcttcccgctggagacgaggtcggcggggcagagcatcacggtggcggtgaacctcttcttcaccttcgtcatcgcgcaggcgttcctgtccctgctctgcgcgctcaagttcggcatcttcctcttcttcgccgggtggatcaccgtcatgaccgtcttcgtccacgtcttcctgccggagaccaagggcgtgcccatcgaggagatggtgctcctatggaggaagcactggttctggaagaaggtcatgcccgacctgccgctcgaggacggcgacagtcatcacaagtgaaagaaatgtactctgagatagtatatgggggttacagtagatgagacatgacatgtaggatgaggagattaagattgatcatgtgcggtaatgcattctgtgtgtatgttaattgaagttcatggatcatgatgtctgtttgtcgtggcagagaagagaaatattggaaacacaaaattttatactactcgattattaattgtctgaatcctcgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0416200, RefSeq:Os09g0416200