Os05g0479900

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Revision as of 10:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0479900| Description = Conserved hypothetical protein| Version = NM_001062385.1 GI:115464500 GeneID:4339114| Length = 2171 bp| Definition ...")
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Gene Name

Os05g0479900

Description

Conserved hypothetical protein

Version

NM_001062385.1 GI:115464500 GeneID:4339114

Length

2171 bp

Definition

Oryza sativa Japonica Group Os05g0479900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23640199..23642369

Sequence Coding Region

23640535..23641415,23641530..23641647

Expression

GEO Profiles:Os05g0479900

Genome Context

<gbrowseImage1> name=NC_008398:23640199..23642369 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23640199..23642369 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagtcggaggaggtgaaaatgcggttcggccggtgtccgtactgccgcgccatgatctaccagaaccccaaggccgtcatcttctactgcagcagatgccgcactccgatccgaggcaagaacccggagccgacggatgaggcggagtacgcgctgagcaggctggagatcctctccgccgacaccgcgtcggtgttctccgacgagccggaggacgccgggtcggaccggcgcgccgacgaggtccggccgttgtcgaggcggacgaggcggccgtcgagctcgtctgactggacgacgacgacggattcggagcggagcgaggaggcgttctacacgccaaggaacgcgcaggaggggcggccatggcagtcgccgtcgccggtgagctcgcaggagctcggggcgtccggtggtggtggtggcttgcctcgacctcccgatgagccaggcgccgtcgcggcggcgcgcctgatggacccggcgtttcacaaggagctcctccacgcgctggacaacctccgcagcttgatcgtcaccatcgagcagccgcgcccggcgagcggcggcggcgggagggccctgacgcggcgcgattcgcggctcttccgccggctggagtcgcagctggagcgggcgcttccgccgcaggacaccgcttccacgtcggcgtcgtcatccagctgccgcggcgacggcggcggcgggcgtccgtcggcgcccgcgcggcgggagggcaccgacccctgccgcccggtcctgggcggcgcgccattcgtgatctgcggcaagtgctcggagcttctgcggacgccgccgccgccgcggccacggaggaggaggtggaccaccaggatacggtgcggcgagtgcaacgaagtgctcgagctgtcccttcccgccggcggcgtcccggctcagcaccggccgatcaggacgtgctcggcgccgctggtctccgaccaccaccggccactgccacgacggctggagtga</cdnaseq>

Protein Sequence

<aaseq>MQSEEVKMRFGRCPYCRAMIYQNPKAVIFYCSRCRTPIRGKNPE PTDEAEYALSRLEILSADTASVFSDEPEDAGSDRRADEVRPLSRRTRRPSSSSDWTTT TDSERSEEAFYTPRNAQEGRPWQSPSPVSSQELGASGGGGGLPRPPDEPGAVAAARLM DPAFHKELLHALDNLRSLIVTIEQPRPASGGGGRALTRRDSRLFRRLESQLERALPPQ DTASTSASSSSCRGDGGGGRPSAPARREGTDPCRPVLGGAPFVICGKCSELLRTPPPP RPRRRRWTTRIRCGECNEVLELSLPAGGVPAQHRPIRTCSAPLVSDHHRPLPRRLE</aaseq>

Gene Sequence

<dnaseqindica>955..1835#723..840#attatctcgtgtctgagaagccgagctgaagaatcagaggggctctgaagattctgacagctaggtgagattcagttttttttcagggatctagtgggtttccctgttcttttctttaatttgatattttggtatattttaatttgattatagtgccatgttctcccccaatcttcttgttgctctgcaattagtctgtgcaagaaaccaatctgaactctcaatccacgagatgtttattgtcgaaaaaaaacctaacttgagttgcaacagtttactcccgtgcacgggtgtactggatgcccactgtcgccgtagccccgtactaaagttcatgtcgagacagcgtcaatctccaatttctcatcaccatttcccatcttcgctagaggtcaatgagtcctttttcccggcatgtccttgcgtagcaatgttcatcgcagcttttgttttgggggattggtaaatgattatgaagcagtcaattccactgcaattggtcaatgtcttaatgaggagtcgtaattagcagttatattcagttagcgagctgaagttgattgacttgaccttggcataaagaatgcattgatttgggggggtttcaggtttgaatcaagatgcatctcaccggccgaattgattgctgttgatcaaacgccttcttctctgacgaaatttctgatcgatgctttggtagtcggagaagttctgcggcggcgatgcagtcggaggaggtgaaaatgcggttcggccggtgtccgtactgccgcgccatgatctaccagaaccccaaggccgtcatcttctactgcagcagatgccgcactccgatccgaggtgcctcgcccgccatggaatctcagctgtgcttgattagtcgccatggatctgacgcccagaagctgtggtgtttcttggtgttttttttttttttttttgctgtctccgcaggcaagaacccggagccgacggatgaggcggagtacgcgctgagcaggctggagatcctctccgccgacaccgcgtcggtgttctccgacgagccggaggacgccgggtcggaccggcgcgccgacgaggtccggccgttgtcgaggcggacgaggcggccgtcgagctcgtctgactggacgacgacgacggattcggagcggagcgaggaggcgttctacacgccaaggaacgcgcaggaggggcggccatggcagtcgccgtcgccggtgagctcgcaggagctcggggcgtccggtggtggtggtggcttgcctcgacctcccgatgagccaggcgccgtcgcggcggcgcgcctgatggacccggcgtttcacaaggagctcctccacgcgctggacaacctccgcagcttgatcgtcaccatcgagcagccgcgcccggcgagcggcggcggcgggagggccctgacgcggcgcgattcgcggctcttccgccggctggagtcgcagctggagcgggcgcttccgccgcaggacaccgcttccacgtcggcgtcgtcatccagctgccgcggcgacggcggcggcgggcgtccgtcggcgcccgcgcggcgggagggcaccgacccctgccgcccggtcctgggcggcgcgccattcgtgatctgcggcaagtgctcggagcttctgcggacgccgccgccgccgcggccacggaggaggaggtggaccaccaggatacggtgcggcgagtgcaacgaagtgctcgagctgtcccttcccgccggcggcgtcccggctcagcaccggccgatcaggacgtgctcggcgccgctggtctccgaccaccaccggccactgccacgacggctggagtgaggcgaagagcgcgcacggtggccatgatcgatttgttgatggagggctcactgctgagctgaaagggggaaaacctcacgctaagatggatggatgggattgaggttctccgccatcgaatgcacgttgcctttgtcattaacatgtgggctcaggaatcatcgggctcacatgttagtgacaaagtcacatgacttcgacctcgaaggatgctgatctggattgttgatggaagttttgaatagttgtttttgaagaatgattttttttctttttgttattattagtcgctaacccagacgttacaaatgctacgaaattggctatttttgaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0479900, RefSeq:Os05g0479900