Os05g0480200

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Revision as of 10:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0480200| Description = Thioredoxin domain 2 containing protein| Version = NM_001062387.1 GI:115464504 GeneID:4339117| Length = 4087 bp| De...")
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Gene Name

Os05g0480200

Description

Thioredoxin domain 2 containing protein

Version

NM_001062387.1 GI:115464504 GeneID:4339117

Length

4087 bp

Definition

Oryza sativa Japonica Group Os05g0480200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23648120..23652206

Sequence Coding Region

23648394..23648546,23648662..23648784,23648869..23648982,23649145..23649162

Expression

GEO Profiles:Os05g0480200

Genome Context

<gbrowseImage1> name=NC_008398:23648120..23652206 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23648120..23652206 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttgctgtggcagcagcactgtagacgccgaggagcacctggactacagtggcggaaatgtgactttggtaactgatcaaaagaattgggacaatacaatggaagaagtagctgagcatggcaaaacagttgtgctaaaattcagtgcaatttggtgcactccgtgtaggaatgctgcccctctattcgctgaactttcactgaagtatcctgacattgttttcgtgtccgtggatgtagacgaaatgccggagctggtgacgcaatacgatgtgcgtgcaaccccaacgttcatcttcatgaaaaacaatgaggagattgataagcttgttggaggcaaccatgaagatcttcaggaaaagttcgaacagcttaaccggccaaagttatatgatgatgtataa</cdnaseq>

Protein Sequence

<aaseq>MGCCGSSTVDAEEHLDYSGGNVTLVTDQKNWDNTMEEVAEHGKT VVLKFSAIWCTPCRNAAPLFAELSLKYPDIVFVSVDVDEMPELVTQYDVRATPTFIFM KNNEEIDKLVGGNHEDLQEKFEQLNRPKLYDDV</aaseq>

Gene Sequence

<dnaseqindica>3661..3813#3423..3545#3225..3338#3045..3062#gccatccccgtgccacccacccctccgccgggggccgccgccgccgccgtcgacgcacggccgacgtgctcggcgcagaaccaagcagacggcgagccaaacttttcttgcccttttgctcttgcagaggtacgccccctctctgaacaatgtgttcatcgttgtatagcgaattgctgctgcatgatttgagagattggggaaaccggccggaaatgctatcttccttccgttcgtctctctcttttttttttaaaggatacgcaaaatgtgtatcttttgtattaagattaaaaaaaagttattacagagagaaaggaaagaataaaatgggggcggggaaacaatacattgatagctcgcggaacaatttgacgaccaaatgctccacctagatgggcgggtgctcctgtctcccttgagagcgtggccccccgatgccgctagcttcgctatttcctgtatggtcttgcattggccattaagggcccctttgatttggaggaaaaatataggaattttaggaaaatttcctatgaagccctttgaaacaaatgattgtatcctatccaatcctttgaaattcctatgtaatggacaatcctatagagattttggaggaaatttagcaagagcttcaacctcttgctaactttcctttgagtatatctctctcatccaattcctgtgtttttcctatgattcaatcaaacggtcattcctgtgtttttcctgcgttttgcaatcctctgttttacacttacattcctatcaaaatcctacgtttttcctattcctatgttttctcaatcctgcgattcaaaggggccctaaaaaccttattgtttcgctccttccatatcgtctatgtcaccaatcattatctttgctcatgtgagagatttgggaaaccagaaaagccatcttctcttttcccctctaatcttaataacattttagccgacccagtaaaaaatattgctctataaatttcgtaggttatttgtgattgggtgattggaccgtgatcctggcaaaattaatttacattcatggtgtgaattatttttatgggacatgatgtgaaatatggtctcttgatttacgtcacaaaacagtttgacggtttatttctactttttttagttcaaattatcaaatgagtattgaacatgtatttaaaattttaaatgctattgaaggtttacataaacattaaacgtctatacaaagttaaaagtgactgcatacatcgtttgctctatggctgataagctgtggggatgtgaatgaagcaactaaagataatttatgggtaaaaacttttgcatttgtgttcttcgcaattaaaagctagcgttcaaaaataaactacgatgaaaaaagcttcaaaatcaactctaaaattaagttttaaaacttaaattttggctacgactaataagtcaacaaacaaacaatggagctgacgtcaatagtattttaaccaaagggataatttcattcttacccctattttgatatccaatatcaattttgcccctattttttaatgtttttatttttgcccctgatttttggaaatgaagtagacgtttaccactatttttaacagaagttagtcaacctgggattatggagctgaagaagtagagaaaaaaaagaagtaatgatttttaattcgttgatggacctttatacccctggtgagccataaccaaacaatgccggtccttgccttccccaatcccacctatggtgacgagcagaaggccgcgcgtgtcgaggcaggccaggcgactgcggctcgacaaggggacgagaggacgatgggctcttgtccaggcggtggcggcttatcgtgaggagcttgcggcggcggcgtctcagctaggcatcggcggcttcatgcgggaaggcgacgacggcagtggcccggccaagcggtggcggctagcacgccaagcaacaggccgcgcgcagcgagcaggtctcaggggcgctgcaagctgatggcgagcaggccgggcgcggcggacggccggaggtgcacgctgcggcaagcagcaccaacctggcaataggaagaagcaacatgctactagattggatttttttgacctcatgatttggatttgcttgattttgtgatgattgctattacatgtcttttgttagctgtgtaaaaaccatgcccaaattctgtctttttttttcttttgcaaaatatacaaattttatcaaatttgtcgcaaaattatattatgtcaaaaattttaatcttctataaaaaattgtcatatttgcaaaagtttgtgaaaaatgcaatgtaaaaatgggggcaaatacacaattattgaataaacattcagacaaatattcaatatcaaataggggtatgattgtcttttcgccagagatgtaacaccgtcaatatgtccatccaaagtaggggtaaaatttgctttaatttcaaaaaagtaggggtaaaaacgaaaaccctaaaaaaacaggggtaaaatcaatattgaagatgaaagtaggggcaagaacgaaattgccccttaaccagatcactaccatgaacaggatcttgtcccatctagaaaaaaaaactctctccatctcataatataaagcatggtcaaacttggcacagtctttaaaactaatatttgacctataatttctcatatactataagttttttacaacaaaattataaccatcttaaagtgaatttaaatgccaatctaatgatattaattttagcaaataaaatttaatttatattatagtcaaatatttttaaagttgaatcttgaaatgtatgtataccttatattatgggatagaggaagtaggagcttatttacatgaatgtgactttctttttccatcaaaacatccaggttaatgttttgtgtgacctcttctttttcttggcttagcggcattgacaccagtactgaatattgttcccgattttttttttcatcagtggagcagaggacacttgcatcttgacgaattttctcaagtcgatgggttgctgtggcagcgtaaataatctccttctccagtacaattcatattgtggttattgaactagacattacaatatactgcactgccccaatccacagacaagtagtgctgcttattatttgcatcttcaagctcataattaggggacctgcattatgcttctatttttttttcagagcactgtagacgccgaggagcacctggactacagtggcggaaatgtgactttggtaactgatcaaaagaattgggacaatacaatggaagaagtagctgagcatggcaaaacagtaagatgttgatcaattgtctgactatatatgatgaaagcatagctgtttatgttaaccatggtggtatgtccctctgaacaggttgtgctaaaattcagtgcaatttggtgcactccgtgtaggaatgctgcccctctattcgctgaactttcactgaagtatcctgacattgttttcgtgtccgtggatgtagacgaaatgccggtacatccaatattctgaattttttccagttgccgcccattttgctctctgtacacttttttttttgtggcaacagataacaaagatgaatggcatttttactttgattcgtcaggagctggtgacgcaatacgatgtgcgtgcaaccccaacgttcatcttcatgaaaaacaatgaggagattgataagcttgttggaggcaaccatgaagatcttcaggaaaagttcgaacagcttaaccggccaaagttatatgatgatgtataagcatttttttttggtttgctgtctaattaagaaattggtgagccaaatcagtagaatgagctctctgtcgaatcaaagtactggattggctgaagaaacagttcagaaatctacataggttgcaagaagctgaccaacagaagtagggatttctcagtagagttcagtccgaatacgggcagtaattaagttaagttagctagtgtctgcaaactctgcaccgcactgttcaaagtgattaacctcatacaaaacaatgtaattatatattacc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0480200, RefSeq:Os05g0480200