Os09g0550500

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Revision as of 07:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0550500| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001189044.1 GI:297727218 GeneID:926845...")
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Gene Name

Os09g0550500

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001189044.1 GI:297727218 GeneID:9268457

Length

5273 bp

Definition

Oryza sativa Japonica Group Os09g0550500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22604390..22609662

Sequence Coding Region

22604416..22604543,22604657..22605827

Expression

GEO Profiles:Os09g0550500

Genome Context

<gbrowseImage1> name=NC_008402:22604390..22609662 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22604390..22609662 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcttcttctcgccgtccaactcatctggactgtaccttggcatatggtacaacaatgtccccaagctcaccgtggtgtgggtcgccgaccagctcgcccccatcaccgaccacccttcttcttccaagctcgccatggccgacgacagcagcaacctggtcttgtccgacgcggccggccgtgttctttggaggactaatgtcaccgccggcggcgtgaactcgtcgggtgccgtggcggtgctcgtgaactccggcaacctcgtgctacggttgcccgacgacaccgccctgtggcagacgttcgagcaccccagcgacgtgttcatggccggcatgaagctcggcatcgactaccggtcgcactccggcatgcggatcgtctcctggaagggcgccggcgacccgtcgccggggagcttctcgttcggcgtcgacccggagaggccgctgcaggcgaagatctggaatgggtcgcgcgtgcactggcgcagctcgatgtggacgggttacatggtggacagcaactaccagaagggcggctcgtcggcgatctacaccgccgtcgtctacaccgacgacgagatctacgcctccttcaccctctccgccggagcgccgccgatgcactacctcatgtcctactccggcgacctccacctgcagagctggagcaacgtgtcgtcggcgtgggtcaccaacgccaggttccctcgccgcgactgcagcctcttcggctactgcggcgcgttcggctactgcggcaacagcaccggcggcggcggcggcgccggcggcggcgtctcgacgtgccactgcctcgaagggttcgagccggcgagcggcgccgactggagccgcggcgacttctcgctggggtgtcgccggaaggaggcggcgcgctgcggcgacgggttcgcggagttcccggacatgaagctgcccgacgggtacgcgctcgtcgggaacatgaacgccggcgagtgcgcggcggcgtgccgccgcaactgctcctgcgtggcgtacgcctacgccgacctgagcaggagcacgaggagagatccgaccaggtgtttgatgtggggcggcgagctgctcgacatggagaaggtgaacgagagctggggtgacttaggcgagacgctgtacctccgaatggcaggtgcaggtagggggtcaaaaagaagtgcagtgaaatttgcacttccaatagtgttggcaagtattcttatacccacatgcatcctcatatgtgttcccaagttcaaaggtacatatatatgttcatataagtaa</cdnaseq>

Protein Sequence

<aaseq>MGFFSPSNSSGLYLGIWYNNVPKLTVVWVADQLAPITDHPSSSK LAMADDSSNLVLSDAAGRVLWRTNVTAGGVNSSGAVAVLVNSGNLVLRLPDDTALWQT FEHPSDVFMAGMKLGIDYRSHSGMRIVSWKGAGDPSPGSFSFGVDPERPLQAKIWNGS RVHWRSSMWTGYMVDSNYQKGGSSAIYTAVVYTDDEIYASFTLSAGAPPMHYLMSYSG DLHLQSWSNVSSAWVTNARFPRRDCSLFGYCGAFGYCGNSTGGGGGAGGGVSTCHCLE GFEPASGADWSRGDFSLGCRRKEAARCGDGFAEFPDMKLPDGYALVGNMNAGECAAAC RRNCSCVAYAYADLSRSTRRDPTRCLMWGGELLDMEKVNESWGDLGETLYLRMAGAGR GSKRSAVKFALPIVLASILIPTCILICVPKFKGTYICSYK</aaseq>

Gene Sequence

<dnaseqindica>5120..5247#3836..5006#gcttcactctccacctccaccgtgccatcgttgccttcccgctgttctcgccgtcgccgtccgtcgccgagcaccgggggagccggtgcgtgcgtgggcgcgtgacgcgggactccgggcgccgtcttcttcccttgcccgacccgaggtcgccgtgatcgcgtctcgtgccaccggccgtcccccgccgcctctccccgtcgcggtgactccctccgcccctctctctgtttttcctcctccttaggctgctagagtgctcgacgccgcgtagtcgctctgtgccgcgcacgaactcgccgtcgccggcctctctcggcgccgcccgtgccctctcgaccggtggaatgagttcgcgacctcgcgtagatgctccagcaccggcgaattgacccctcgtcgctccggcgagaaacccctctttgctcgccggcgatagccgccgtcgccatccgccgtcgcgctcggccatgcgccgccgtcagctcgaaacccagcgattactctcaccgccgcagtccgcaggaccccttgaacctccccggcgcgccgccgcggccgcccgcctcgccggccgcgcccgcgccgtgccacccatcccgccgccgcacggctgccgtcgccagccgccgccgcgccgcctctccctcatctgcaccgttgaattagctccccttgatccccgcttgcttccggtgcacgccgcccctcccggttcgccgccgctcgccggtatgagccgctcgccgccagccgtcggatcggccgcccggcctcacctccctttcctccatccaacgtggctgtccacgtgggcttgaccgggtcaagctgacgccccgccagccagcccccccccccccctctcggcctcgccagccgttgggctgcgctgctccccggtccaatggactaaagtccacttatactccctcgtgccgagcccagtaccccccacccaaaagctaaagtccatctttgctcccttcccaaacacagtgaccaaaagtccatatctgttccctcccaattcacctctctctcaccatatgttggccccacatgtcaatgagtgataaaagaatattcttgagaatattcttttccataaaattcataaatcattgcctgcattccaaaaaaaaaagattcgacaaatcatttccttgtccagaaattccaattaaactcccaaaattcatatctcccgatccgtaattccgattaaccccgttccacttccagtattcccgtaaaatcgagatctatttaatggcaccattatctagtctaaataggatttttcttttggtcttttgtttaggtttttgattgtttgcgtatagttgcggttaccggattttcgtcgatcgcgggttttctcgaagattcgtgaagctccgtgaagaccttgagcaaggcaagtcaccctttgatcaattgctcctataattggaaaatcattattattttgtttgcaacttgcattagtagaatcacacacttaatttgcttggcctcggtttgcatgtcaaatcgacggacctacccagtagtcgcactaattcctgtaggttgtactaccctgattccttgtcgctccacccttgtggtacttcggtatttgtactctctgagtgcgtataccaaatatcccacatacaccgttgattgtcgaaaatttgggaaatgggtttgagaagccttgaaaacccgacatgtggtgtcggtgtgtttaaaaataaaatgaattatgaaaactcgcgatgcgggggttgtgcctatgtggcactgtcccgtattcgcatataaggaccgattcctgtgggaaactcatcgagcataatcaaagtgcaaccacaaggtggaatgggacaccctggctaagtaactagtcggttcagggaaacctcgcatgccaatagttgggaacgccggagcggggtctgttggagccaaaccgggttcctggtaagcaaggaagagaagcttgctgaattaccgatcgaggtggttggagtttgatttgtgaaaactaaaatggcctatatttatgtgaggattcgatccttctatgtggcatgaggtaaccctgggtcggcttgggaaaggctttgttgcgaacctccgataccgacgggtgttcggaataagttcgtatcttgtgggtaaagtgtacccctctgcagaggttaactaactgttcgaacagccgtgcccacggtcatgggtggatgtgaggtggttcccgttgcgtagatttgtttgcctgtgctttgtgaaaagttgttgtggtgttggaatcgtaaccagaatcagcctacgtggcagatggatgacctgagtggtcagaaacgaatctgtgtgattcgggatgtctgcgggcatcatagactaggcttcccgagtggaagcggattgctttgctgctgggcagctggactctgggagtccgagaaaatgaaaaaggctctgggagccgcttaatcaagtgaaatggctctgggagccgataagtaatgatatgacccgggaggtcggtacattaccatttgacttgttgaaaagcatctcttaagtcgaatcgagacacaagtctcttttcgatccaaactcaaaaagaaataaatcacttagtgttttcaaaatgatttcaaacaaaggatttgcaaaacaaccttgcctctcttccaagcttgcattaaacacctaaattcccgtgacttgctgagtacgaaagtactcacccttgctctatataaatatatatagttcccccgccttgaagtgaagtgaagattagggtttcgtcctggttcccagccatcgcctgtggtgttgggtgttagtccgttggttccgctgctgctgctgttgttggtgtttcctcgtccatgtcgtcggttgcattctcgggctgttctgagctgcaacctaagttaaggtaaataagtcatctatttattttaaggattttcaatgattcatatttgtcaccatggataccagcactatggtcctgggactggtaccgagatcgcggtttcgtaggaagcggttcgcgccgttattcctacgacacgctcctatcaggtgacgttgtacggcggtgccggattggggtgtgacagttcccctccaagtcaacacatgttggcatcagctgcgttgtgttttagtacttgaaacgatcgcccccccccccccccccccccaaaacgaaattacagctgaagtttgctgtgacctgaaaaaaaaatgtagaagttggcttaagagttgatctcaggactgacaggacaactaaaatggaaaaagtcttatcttaatggcacatgttagttgagtaattgaccctagtaacataaataaggaagactactaatccaggtctcctcagattagattacagcacttaatatactaaaatacctgtgaagtttacagctactgccaaccaatttcatcttacctgccacatatttgcctgcaatgcaggattagcctgcattctgaaacatatattgcctgatggctgcaatgtagcctgaattctgaaactagtcaactgcaaccaccaaattcctgcatctttgtgcatgcacactatataagctggagctaagcagcttcatctcccagctagttgcaaagctaatcctgattattactggctaacacaatggaatatgcaggttgcacttgcactcaagctgccactgccatctttctcttcttgctttctttgccgttggctgcttccgatgaccggcttgccgtcggcaagacgctctcccctggcgccaccctcgtctccgatggcggcgccttcgccatgggcttcttctcgccgtccaactcatctggactgtaccttggcatatggtacaacaatgtccccaagctcaccgtggtgtgggtcgccgaccagctcgcccccatcaccgaccacccttcttcttccaagctcgccatggccgacgacagcagcaacctggtcttgtccgacgcggccggccgtgttctttggaggactaatgtcaccgccggcggcgtgaactcgtcgggtgccgtggcggtgctcgtgaactccggcaacctcgtgctacggttgcccgacgacaccgccctgtggcagacgttcgagcaccccagcgacgtgttcatggccggcatgaagctcggcatcgactaccggtcgcactccggcatgcggatcgtctcctggaagggcgccggcgacccgtcgccggggagcttctcgttcggcgtcgacccggagaggccgctgcaggcgaagatctggaatgggtcgcgcgtgcactggcgcagctcgatgtggacgggttacatggtggacagcaactaccagaagggcggctcgtcggcgatctacaccgccgtcgtctacaccgacgacgagatctacgcctccttcaccctctccgccggagcgccgccgatgcactacctcatgtcctactccggcgacctccacctgcagagctggagcaacgtgtcgtcggcgtgggtcaccaacgccaggttccctcgccgcgactgcagcctcttcggctactgcggcgcgttcggctactgcggcaacagcaccggcggcggcggcggcgccggcggcggcgtctcgacgtgccactgcctcgaagggttcgagccggcgagcggcgccgactggagccgcggcgacttctcgctggggtgtcgccggaaggaggcggcgcgctgcggcgacgggttcgcggagttcccggacatgaagctgcccgacgggtacgcgctcgtcgggaacatgaacgccggcgagtgcgcggcggcgtgccgccgcaactgctcctgcgtggcgtacgcctacgccgacctgagcaggagcacgaggagagatccgaccaggtgtttgatgtggggcggcgagctgctcgacatggagaaggtgaacgagagctggggtgacttaggcgagacgctgtacctccgaatggcaggtgcaggtaaataaatctattcagatatatggcattatcaattttttttagactggtgctttctcaatttctcactgcaaaatatgtcagattaaattagcttgataaaaatttggcaggtagggggtcaaaaagaagtgcagtgaaatttgcacttccaatagtgttggcaagtattcttatacccacatgcatcctcatatgtgttcccaagttcaaaggtacatatatatgttcatataagtaataaataatctgtgtgtatatggtgat</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0550500, RefSeq:Os09g0550500