Os09g0439400
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os09g0439400 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001069809.1 GI:115479360 GeneID:4347165 |
| Length |
4347 bp |
| Definition |
Oryza sativa Japonica Group Os09g0439400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:16936554..16940900 |
| Sequence Coding Region |
16936706..16937236,16937851..16937971,16939025..16939273,16939553..16939706,16940081..16940606 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:16936554..16940900 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:16936554..16940900 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggggagaccggggtggccgtcgcctcctccccgcgcgccgcggcctcctccccgcgcgccgccgcctcctcggcgtcggtcgcgtcgtcgccgcgggcgggcggggtgggcgggcggcaccaccacaggcggtggggtggcgcggcggcgatctcgccgtcgtacagggcggtgctgctcgcgctgtggctggtcgggttcgcgctcgtgttcctgtggcagagcacctcggtgggccgcgcgcggctctacacccgcccgccgctgctgccgaagcgcgcgccgtccgcccaggggatggggcagtgggtggccgcgccgccggtctacgatctgagggagttcgggggcgtcggggacgggcggacgctcaacaccgaggcgttcgtggcggcggtggcgtccatcgcggagagaggcggcgggaggctcgtcgtgcccgccgggaggtggctgaccgcgccgttcaacctcaccagtaggatgacgctattcctcgccgccggcgctgagatcctcggggtccaggatgaaagatattggccgttgatgtctccgttaccatcatatgggtacggaagagagcacagggggcctaggtatgggagccttatacatggtcaagacctcaaggatgtgactataactggacaaaatggaaccataaatgggcaaggtcaaagttggtggagcaaatttcggaagaaagtcctcaatcacacaaggggtcctcttgtgcaactcatgcggtcaagtaacattaccatttctaacatcactctacgggattctcccttctggacacttcatatatatgactgcaaggatgttactatatcagataccaccatcctggctccaattgttggagctccaaacactgatgggatagatccagattcttgtgagaatgtagtgattaaaaactgctatatttctgttggtgatgatgggattgctataaagagtggttgggaccaatatggaattgcttatgggcgtccatctactaacattattattcacaacgtcacaatccgctccatggtcagtgctggtgtatctataggaagtgagatgtctggcggtgtttcaaatgtcttggtagagaatgtccatatctgggattcacggcgaggtgtgaggataaagactgcccctggaagaggggcctatgtaagcaacatcacgtaccggaacataaccctagaacacatccgagttggcattgtgatcaagaccgactacaatgagcacccggacgaaggcttcgaccccaaggcagttcccatcatagagaacatctcgtacagttcaatccatggacatggggtgcgtgtaccagtcaggatacaggggagcgcagagatccccgtgaagaatgttactttccatgatatgtcagtcggtttggtggacaggaagaaccacgttttccagtgctccttcgtccaggggcaggtcattggctatgttttccctgtaccgtgcaagaacctggatctgtacaacgagcggcgtgagctggttaaacaatcagcactgcagaatatctctgatatcgactacagtttttga</cdnaseq> |
| Protein Sequence |
<aaseq>MGETGVAVASSPRAAASSPRAAASSASVASSPRAGGVGGRHHHR RWGGAAAISPSYRAVLLALWLVGFALVFLWQSTSVGRARLYTRPPLLPKRAPSAQGMG QWVAAPPVYDLREFGGVGDGRTLNTEAFVAAVASIAERGGGRLVVPAGRWLTAPFNLT SRMTLFLAAGAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITG QNGTINGQGQSWWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCK DVTISDTTILAPIVGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYG RPSTNIIIHNVTIRSMVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGA YVSNITYRNITLEHIRVGIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPV RIQGSAEIPVKNVTFHDMSVGLVDRKNHVFQCSFVQGQVIGYVFPVPCKNLDLYNERR ELVKQSALQNISDIDYSF</aaseq> |
| Gene Sequence |
<dnaseqindica>153..683#1298..1418#2472..2720#3000..3153#3528..4053#gctccttttaaacccgtgctgctcctccgacgagcgccgccgccgccgccgccctcgccatcgcctccgcgagcgcgcgtctccctgctccatgggccgcggggcccagacgaccagccggtgcgcgccgtagatcccgcgcgccagatccgatgggggagaccggggtggccgtcgcctcctccccgcgcgccgcggcctcctccccgcgcgccgccgcctcctcggcgtcggtcgcgtcgtcgccgcgggcgggcggggtgggcgggcggcaccaccacaggcggtggggtggcgcggcggcgatctcgccgtcgtacagggcggtgctgctcgcgctgtggctggtcgggttcgcgctcgtgttcctgtggcagagcacctcggtgggccgcgcgcggctctacacccgcccgccgctgctgccgaagcgcgcgccgtccgcccaggggatggggcagtgggtggccgcgccgccggtctacgatctgagggagttcgggggcgtcggggacgggcggacgctcaacaccgaggcgttcgtggcggcggtggcgtccatcgcggagagaggcggcgggaggctcgtcgtgcccgccgggaggtggctgaccgcgccgttcaacctcaccagtaggatgacgctattcctcgccgccggcgctgagatcctcggggtccaggtgaggcatttcaagctgcaatccccatctctttgctgaattttaaggttttttttaacaagtttatgcacatagggctacgcttcacgaagtgtcacgtaattagaccgtagcgtcatatatcatactacaatggcaaacttttaactttctgtggtgcaacgtggttcatttacattcaggtttaaatgcttaatactttaattttctgtttatcgtggcccctttttacaacactaaataggtgtgcatatggtggaagagctgcaatatttttactcatggtttctgcagtgaacaaacattttaaaacggtgtacctaattaaattgactaacattgttaaacagagggagtaacagtattttgtaatttatctggtatgtcttggatgaagcttgaatggatatgttagtcaaaaatggttgtttcccactgagagatatacctgtgtatgctgtcaaatgaaggcatactgatctttagtttatctgaagttagctcaaccttccgctgcaatgcgggtctagttttttcttacttaaaattttctgttactttttacagtttggtgcatttcttaccaactgagtcaacttttacttatatgtaaggatgaaagatattggccgttgatgtctccgttaccatcatatgggtacggaagagagcacagggggcctaggtatgggagccttatacatggtcaagacctcaaggatgtgactataactggtaagttgtagttttggttttttttaatgcattctaatactcagttgatatcgtgaatgctgtgcttataaaatcaaactaagtagagaagtaaaagattctcaggtaatattgcaagaatgtagcttgactttaacagggaatttcgaaagataagccgtatggctttatcatttgaacttgtcaacatggccatcacctttaagaccctcattgctgcagttagggtcgaggcaacaaatgtgaggatcaagccacaaaattcagtctccaaaaatgacaaatctcagctatagtggtcggaaaagaaaacattatatgatagaagtgtgtggtcatatgctggagcctggagcttatgttgtcatctatcttttcaaggacttttgagtttaactccaatcacttggttcttgatcatatggagacatgctcgtcagttgatctcatcctgcacatgttctctaaaatataacagtaaatacaatcaccaatttcttgaaactttaaatagcggtactggatatcttttccaccagcaagcatgtggcaaattgagaataacttgacaaagatacgatcttgtttaatagcatatttttctctacattgtaggaggtatgaatatttggtgcagtgtatttgttgttaaagcaattctagagccaagttccatcagatcttgaaaccactatatctgaaatcatgcaaatggttggaaaagttatttctcagtcactaaattttaatatgaatcgtatttggttgtcgacatgtcctatttcagcatataagactaaaagagaggtcctggattattttttcagaaacagttgcaattaagctaactgacatttatttataagctatcattctgttaggagtaggctaaatgttggcactggtcatataatttgttccttttgtgtattatttattggcagcctgttccttgtactcttatccttgctagcagctctttgtcctgaagctgaaattggcttgtattttcatcagctgagaggttttctcctttttccctaccttatacaggacaaaatggaaccataaatgggcaaggtcaaagttggtggagcaaatttcggaagaaagtcctcaatcacacaaggggtcctcttgtgcaactcatgcggtcaagtaacattaccatttctaacatcactctacgggattctcccttctggacacttcatatatatgactgcaaggatgttactatatcagataccaccatcctggctccaattgttggagctccaaacactgatgggatagatccaggtcatttcccaattttatctctttcattttttttgtgattctgagcttttcttcatttctgttagcttataatttttttagaaccacagggcaatgccacagctgcaattttcttatatcttacaatctcctatgactgtataatgacaatatgtacatgtagatgacaatatgtaccagacaaccctgtattcctacatcatgttggagtcatttgtattatttagtaaactttatgcttcactagtaagattctcaattattttactatatatgcagattcttgtgagaatgtagtgattaaaaactgctatatttctgttggtgatgatgggattgctataaagagtggttgggaccaatatggaattgcttatgggcgtccatctactaacattattattcacaacgtcacaatccgctccatggtcaggtgagtcatttcctcatgtttcattatgttctcagtttggtttggttcactattagaagttttagatgttcagaatatgaattggtataagttatccggtagataattctgtgaatatgttaactaatacacagcatattggttgtgaacttgtgatgttttctttggtctaatgattgcatttccttaccgtacaagttaatttatctactaggatcacagatatcaatattatttgtaatacatctcttcattattaagtaggctagcttgttcgcttaatttatttgttaagtgccagtagtcgagacttttctaaagccatgtgattgtgccattgtgtgtgacctttttttttctattttattggacagtgctggtgtatctataggaagtgagatgtctggcggtgtttcaaatgtcttggtagagaatgtccatatctgggattcacggcgaggtgtgaggataaagactgcccctggaagaggggcctatgtaagcaacatcacgtaccggaacataaccctagaacacatccgagttggcattgtgatcaagaccgactacaatgagcacccggacgaaggcttcgaccccaaggcagttcccatcatagagaacatctcgtacagttcaatccatggacatggggtgcgtgtaccagtcaggatacaggggagcgcagagatccccgtgaagaatgttactttccatgatatgtcagtcggtttggtggacaggaagaaccacgttttccagtgctccttcgtccaggggcaggtcattggctatgttttccctgtaccgtgcaagaacctggatctgtacaacgagcggcgtgagctggttaaacaatcagcactgcagaatatctctgatatcgactacagtttttgacaaggcggcaccctctttttttcggttcactgtaccattgctgtaggagtattcactgctcagttaacagttacagagaattttttgggtagctttttacagctttcactctcagagtctcaggaatgtatttaaggatgttccacctgtctatactgcctcacaaaaggacactgatgtttccacttcagtcatgtatttgtacacactaaatcaggcccatagctcaattgtacacctttttagcaacaaatttctctgttgagagcaataaagttcttcgtttacacatcc</dnaseqindica> |
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