Os05g0481400

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Revision as of 10:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0481400| Description = Transcriptional factor B3 family protein| Version = NM_001062395.1 GI:115464520 GeneID:4339125| Length = 4333 bp| D...")
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Gene Name

Os05g0481400

Description

Transcriptional factor B3 family protein

Version

NM_001062395.1 GI:115464520 GeneID:4339125

Length

4333 bp

Definition

Oryza sativa Japonica Group Os05g0481400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23709508..23713840

Sequence Coding Region

23709914..23710084,23712087..23712293,23712389..23712566,23712652..23712686,23713127..23713228
,23713310..23713366,23713638..23713727

Expression

GEO Profiles:Os05g0481400

Genome Context

<gbrowseImage1> name=NC_008398:23709508..23713840 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23709508..23713840 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggaggccggcagcgcggccgccggcgccgcctacgaggaggagcgccggaagcgggtcctcgagaacctcaagcacctcgaggatctgggcataaagaagatgtccaagagcttgctggaggcggcgagattgcagaagagcactcgtgccagccccaagccgcggaagaagtttgaggttggggccactgaagtgaggcgttcatcgagggcgcgcaactcggtttcgtacaaagagaattttgatgaactcaacagttttctatgccgtagaaggggcagtaggattaggagcacagagcaggggagggattacaccggaagagttgcctcttatgaacagcaacaacgtgctttcaaaaaagctgagagacttcaaaatagtctagaccctgagaacccgtcgtttgttaagaccatggttcgatcacatgtgtccagctgcttttggcttggtcttccaactagattctgcaaattgcatctgcctcccaaagagtataagatggtcttggaggatgaagagggtggtgaatttgattctgtctacattgggaaccgtacaggcctaagtggtggatggagaggttttgcgatgcaccacaacttggaagatggtgattcattggtctttgaattggctgaaccagacagatttaagatctacatcataaaagctgttgatgaggatgcaaatgagtctgagcctgctgatgaggaagctattggggacaaggacaccagtacagaggatgcagctgagcaggatgactcacctaatgctgaacctttaaaaggaactaagaggagaaaactccgtggacgccggtag</cdnaseq>

Protein Sequence

<aaseq>MAAEAGSAAAGAAYEEERRKRVLENLKHLEDLGIKKMSKSLLEA ARLQKSTRASPKPRKKFEVGATEVRRSSRARNSVSYKENFDELNSFLCRRRGSRIRST EQGRDYTGRVASYEQQQRAFKKAERLQNSLDPENPSFVKTMVRSHVSSCFWLGLPTRF CKLHLPPKEYKMVLEDEEGGEFDSVYIGNRTGLSGGWRGFAMHHNLEDGDSLVFELAE PDRFKIYIIKAVDEDANESEPADEEAIGDKDTSTEDAAEQDDSPNAEPLKGTKRRKLR GRR</aaseq>

Gene Sequence

<dnaseqindica>3757..3927#1548..1754#1275..1452#1155..1189#613..714#475..531#114..203#cctttctcttagtatttttttttctctcggagaggagaagagagagacccatttcctcctcgcgtagtcgcgtgcaggggagaagaagggtttcggcggagggaggaggagccatggcggcggaggccggcagcgcggccgccggcgccgcctacgaggaggagcgccggaagcgggtcctcgagaacctcaagcacctcgaggtgagcccgcccgcccgtgcacacaagcgtttcagattttttttttttttggctctcatctctttctccgttcctcgttgtggatcgtggatagatttgaggtgctttttttccaccggtagaacctgattcgtttagaggatggatgttcgtgcgggattccacgcattcccctttgccgattccgtgtggattggatgcactgtcgcagcatcaatttatctttctttttttctttttggttgaaatttcggtgcttgattctgcgcaggatctgggcataaagaagatgtccaagagcttgctggaggcggcgagattgcagaaggtgattacggcaacctatgctacacgcgggggatttgggttgctggtatcgtggattgatttactctgggtcttcttgcagagcactcgtgccagccccaagccgcggaagaagtttgaggttggggccactgaagtgaggcgttcatcgagggcgcgcaactcggtttcgtacaaagagaatgtgagttggtccacttcaaagctagtgctatttgattggtagtgttgcttttgttggggatttaggaagaaattttgcgatgtctattcagatactgtagtcatgttctagaacaagtttgtgagtccagttttttatatgggttacaatcccaaatgaatccttaatgacatgatcctagtttcatttaaactaacattccatatattttgttaatatgttcattttatgtacaaaatattgctaaatttttcctataaatttggtcaaacttaaagaagtttgactaggaaaaaaagtcaaaacgacttataatatgaaacggagggaataattacttagagttaaagcgcaaggaagctttgttttgttcgtgaagtgatgaaagattattttcatgcaaatgttggtactaagttgtgctctttttattgtgccagtttgatgaactcaacagttttctatgccgtagaaggtaatacttccatatggtttacagatttgtgatagttgtggctgtggccaggcaatataattggctacttgcttgtgttgaacaggggcagtaggattaggagcacagagcaggggagggattacaccggaagagttgcctcttatgaacagcaacaacgtgctttcaaaaaagctgagagacttcaaaatagtctagaccctgagaacccgtcgtttgttaagaccatggttcgatcacatgtgtccagctgcttttggcttgtaaggtttcgttgtatggaattcattaactaattttgttaaaaatattatgatcaatgagtactcatagctatgtttcttttccatcctacaagggtcttccaactagattctgcaaattgcatctgcctcccaaagagtataagatggtcttggaggatgaagagggtggtgaatttgattctgtctacattgggaaccgtacaggcctaagtggtggatggagaggttttgcgatgcaccacaacttggaagatggtgattcattggtctttgaattggctgaaccagacagatttaaggtactatactttatattggattcaatgacatgtttcatggtaatttggacctcacaaatttcctagcatgaaaaatttaagcatgcaaacactaaccatattattgatttctttttggctagtttgtattgataattgatttgattagtacccattgatatgtgttagtatttggtgttagaaagacaagtggattcaaacaaaatcagtgttatactgagaaccagacaaaggcagcgattctgggtggtaactggctgaaaaccagacaaactaggcagtaattggccaaattcaatttccacgttcagtattttgatgttttctgtttagccgatttttgatccttgatagtttcttgcaaaggtatcctagaagggatcatttaacacaagagtgctaatgcatcaacacaaacatgacaagtaagatagatgccccattgcccttatctgtagtctgtcagtaaatgccagccttgatgtttataaactagtgtggatatcatgttgataaatgtcatgacctgaggccatgacaggataagatgccccattgcccttatctgtagtctgtcagtaaatgccagccttgatgtttataaactagtgtggatatcatgttgataaatgtcatgacctgaggccatgacaggataatcactgcgatgaggggatgaggacttaggttagaaagaagaacattgcttaccggaacagttatgtagctggtgagacttacccttaattaactaacccaatctaatattatctactcctaacctgctgctacagtacccattgaactatccacttgccagaagctggccccacgggcctctagcccaatgtccatgacaataattctgtcattttttattctgaaacttaagagtaatagggaattttttattctagagccactacgcgtcgggcgtgcgatttttacccaaaaaaatcggacaccccatgcctctggctggttggctcccagcaaaggttgcatgtatcatgccaattaattaaagcgtatcatagaacatacatgctgcattaatacatgttgtagcagccaaaccctttacctccatctaaaactgagtagccaaaccctttacctccatctaaaattgatttatttagtggatctttaaatcaccttttcttttacattacttatctgattcataatctatttgcaccgttatatttgttataattaaatatttataatgagatctcacatgattatatttttatgacaaaaaatatattataatatttctaattgaaacattttttatatcacgcatgaaacattgatttgtaatttttgaaacatcccaaactacttactggaacacccaaaaacaccacactgaagtgcaacatttgcaaatgaactagtgaaatactagaaaatacttattgaaacacccaaatagcatcgtacgcaacataaagaacaactctttccaacacaaaaaacttaaaatgtggaacaaatttaaattccaattgaaacgttggcatctgacacgtgaaacataaaaaaacaatggtctaaaccttcttttttaattgtaatataatcatatgacatcttgttgtaaagatttaattgcaccaaatatagcagtgatcggatcgttgatcgaataaataattttagagaaaatatttagaacatgctaatagatttaatgcatgcacgcattttgttagcaaaacaacatgcattttgttagcccgcatgcgtttatgcatgcatgcatggaactgggatagagcaagagaagagagaaaaaggtaattgctcatcttgagaaaaaatcttgtggtcaacacaaccctggtccaccatttggagcgaccgatatttccctggcccgtcgagtgcccgggggaaagcattctcctctttattctggtgtatgttcagttgcattttgttttgtttgaaacatacttgtccttgacatgtaattcatcatcttttacagatctacatcataaaagctgttgatgaggatgcaaatgagtctgagcctgctgatgaggaagctattggggacaaggacaccagtacagaggatgcagctgagcaggatgactcacctaatgctgaacctttaaaaggaactaagaggagaaaactccgtggacgccggtagtaattagttctatcagactttaaatattggtactctgtacaagtatgctgcgtattatcaatttgctctcctgtcaggtcatccttattgatcttttttgttggcctttccatttggtagattatgggtgttccacaagaccataaccaccctttttgttgcagctacggacagagtgttcaccatcataggtaggtttagataacttgtaaagaaatgttgacaattgaacacttgtgtcctggagtccatctgtattgtgctgattcactgtgttcagcttacatgatggatgagaacagcattggcttatgtggcaatgctttttacctgtgtccatggcttcttaaaactgatctacagaccagaaagggaagacatcgacgaacatttacatttttcttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0481400, RefSeq:Os05g0481400