Os05g0482600

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Revision as of 10:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0482600| Description = WD40-like domain containing protein| Version = NM_001062402.1 GI:115464534 GeneID:4339132| Length = 4118 bp| Defini...")
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Gene Name

Os05g0482600

Description

WD40-like domain containing protein

Version

NM_001062402.1 GI:115464534 GeneID:4339132

Length

4118 bp

Definition

Oryza sativa Japonica Group Os05g0482600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23790631..23794748

Sequence Coding Region

23790863..23791054,23792002..23792146,23792218..23792368,23792451..23792576,23792655..23792735
,23793108..23793300,23793392..23793662,23794209..23794417

Expression

GEO Profiles:Os05g0482600

Genome Context

<gbrowseImage1> name=NC_008398:23790631..23794748 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23790631..23794748 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcgcggcggatctcggcgagcccgcggccgtgcagcgggaggagggtggtggcgaggaagaggccgaggcacgaggcggcggtgaacagcgtgcggaagctgcagcggcgggagatcagctcctgccgcgaccgggccttctccatgagcgccgcgcaggagcgcttccgcaacatacagctccaggaggagtttgacacccatgatcctaaggaaaacagcttgctactaccttacttgaggaaaaggtcaaaaattattgagatagttgcagcacgcgacatagtttttgctttatcacagtccggagtgtgcgctgcttttagtagagagacaaataggagaatatgctttctgaatggaagtccagatgaagttatccgcagtttattctacaacaagaataatgagtcactcattacagtatcagtgtatggttctgaaaatttcagtgccttgcgatgcaggacaactcggatagagtatatacgccgagcaaaaccagatgctggtttccctctttttgagagtgagtccttgaaatggcctggattcgtggaatttgatgatgtcaatgggaaggttttaacttattctgctcaagacagtacttacaaggtgtttgacttgaaaaactacactctgctgtattctatatcagataagaatgttcaagaaataaagataagtcctggtataatgctattgatttacacaagaacaagcagctctgttcctctgaagattctttccattgaggatggtaccgttttgaagtccttcaaccacctcctccatcggaataagaaggttgatttcattgaacagttcaatgaaaagctcctggtcaagcaggaaggagagaatcttcaaatacttgatgtacggaacttccaattaacagaagtgagcaggaccgagttcatgactccatcggcctttatctttctctatgagttgcaactgttcctgactttccggaatcgatctgtagcagtttggaatttccgaggtgaactagttacatcatttgaggaccacctgttgtggcacccagactgcaataccaataacatatacataacaagtgaccaagatctaattatttcttactgcaaagctgattccaacgattcatcttcagaagaaaatgctggctcaataaacatcagcaacatactgactgggaaatgcttggccaaaattaaggccagcgatttgtgcaagcagaagaaagcctggaagttccagagtacagccttggaggccctcgaggacatcacagcgctgtactatgacgaagagcgtgacgagatctacactggaaaccggcaaggcctcgttcatgtgtggtcgaattga</cdnaseq>

Protein Sequence

<aaseq>MEARRISASPRPCSGRRVVARKRPRHEAAVNSVRKLQRREISSC RDRAFSMSAAQERFRNIQLQEEFDTHDPKENSLLLPYLRKRSKIIEIVAARDIVFALS QSGVCAAFSRETNRRICFLNGSPDEVIRSLFYNKNNESLITVSVYGSENFSALRCRTT RIEYIRRAKPDAGFPLFESESLKWPGFVEFDDVNGKVLTYSAQDSTYKVFDLKNYTLL YSISDKNVQEIKISPGIMLLIYTRTSSSVPLKILSIEDGTVLKSFNHLLHRNKKVDFI EQFNEKLLVKQEGENLQILDVRNFQLTEVSRTEFMTPSAFIFLYELQLFLTFRNRSVA VWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSNDSSSEENAGSINI SNILTGKCLAKIKASDLCKQKKAWKFQSTALEALEDITALYYDEERDEIYTGNRQGLV HVWSN</aaseq>

Gene Sequence

<dnaseqindica>233..424#1372..1516#1588..1738#1821..1946#2025..2105#2478..2670#2762..3032#3579..3787#cacgaggcaatctcatctccctcctccccccccccctcattttctctctcctctttctctctctctcttcctcccaatctgcgaagcgagagagagagagagagagctcgaggcgagctctccccgcccttctcccaaaccctaatccttccgccgcgcggaggagagccgcgtctcgggcgcgcgcgtggaggcgtgaagcgatctgtattggtggaggggaggggaggggatggaggcgcggcggatctcggcgagcccgcggccgtgcagcgggaggagggtggtggcgaggaagaggccgaggcacgaggcggcggtgaacagcgtgcggaagctgcagcggcgggagatcagctcctgccgcgaccgggccttctccatgagcgccgcgcaggagcgcttccgcaacatacagctccaggttcgcccgcacgcgtccttgcccttgccctaccgtttctagcttcgtttcgatttttttcttttttgttcgcgtgctcctgcggcgaggtagttttttcgttcgccgtgtgtggggaatttgtggctctgggagagcgtgcttggcttcgttttagccgatttgtggtcgggatgggttgccacgattgactaattacttcgcatggggacctgagatctgttcaggttgggccatctgttggtggtaactggaattggagtgggttcatggatgctgtgctgtgctgattttgcaattatctaaaaaaatgctgattttgccagattgtgatgagaaggctgcgtatttcgttaagtaggttagggaccactgctgattcgtggaagtcatgtgcagccgccatctgcatggcaaattcctgtatcgctccgtgcagctgcttgtctggcttaactacaacaaactttataattttagggtttcgttttcgtatggtatcatgttggcatattatttattgcattgtcagaattaacgaagtgtggattaactgtcagattgcaggattggtgtaattgtacatagagaatgactctatctgctgtctttgccctttgcagcaagtatttttttagatgttaaaatttagtacttgcctcgggtatcgttgtcttggttacttgttgttcatgacttctgtcactttgctgctcagataacgatcttagtggctttgatcctccattgaaaaaacaatgtgggaccctgcttggactaattcatgcttataatggcccacagtcaccttatgaaaactgtcaagcttgcacctttggcctgcttccattgtttatgttgtagtggttttacctcacggctgttttagtagtttctcttgactttttatctgtatttttaatcatgcactttactgtcactttcaggaggagtttgacacccatgatcctaaggaaaacagcttgctactaccttacttgaggaaaaggtcaaaaattattgagatagttgcagcacgcgacatagtttttgctttatcacagtccggagtgtgcgctgcttttagtagaggtatgtttgtgtcattgtggtgcacttctgcttcctatgatcatactaagaacagcttcatgtattatcagagacaaataggagaatatgctttctgaatggaagtccagatgaagttatccgcagtttattctacaacaagaataatgagtcactcattacagtatcagtgtatggttctgaaaatttcagtgccttgcgatgcaggacaactcggatagagtaagctttgtgttctatgagtttccgttgttgtgaattccatgctatgccatctgcttaagatactggcaactctttcaaggtatatacgccgagcaaaaccagatgctggtttccctctttttgagagtgagtccttgaaatggcctggattcgtggaatttgatgatgtcaatgggaaggttttaacttattctgctcaagacaggtacacactaacttctgtaatgattataaagtatgtttattctgaaactgtactgatgccattgcattctgcaaacagtacttacaaggtgtttgacttgaaaaactacactctgctgtattctatatcagataagaatgttcaagaaataaagataaggtaccccctctctgacccacctttttttttcttctgttcccatttcttgcagataccctaactaagaagttttttggatgcaccttattactttgaattcaacaggctgttcatcatttgaattcacctcatcttagtagaactaacaataaactcaacaagcatgctttagattgactgaacttgtaagaccagaatgcactatagtgcacatataaatggagagagtgatatcataactgtggtgttgccatgcagtttaacagaactgttcttttttctatagactcttagcttatattatatttttttaattattaatggcaacatgatgtggctttatatgtataatcctgtgttaatttgtggcagtcctggtataatgctattgatttacacaagaacaagcagctctgttcctctgaagattctttccattgaggatggtaccgttttgaagtccttcaaccacctcctccatcggaataagaaggttgatttcattgaacagttcaatgaaaagctcctggtcaagcaggaaggagagaatcttcaaatacttgatgtaatttttcccctaatgccacaattgtcatttacaatcaagagaaacaaattacttttattgtttaggtttttaacactcggtattgtaggtacggaacttccaattaacagaagtgagcaggaccgagttcatgactccatcggcctttatctttctctatgagttgcaactgttcctgactttccggaatcgatctgtagcagtttggaatttccgaggtgaactagttacatcatttgaggaccacctgttgtggcacccagactgcaataccaataacatatacataacaagtgaccaagatctaattatttcttactgcaaagctgattccaacgattcatcttcagaagaaaatggtacgatttttttggtgtttttttttggcatatttgtatatattttactcatcatacaattgaaatcactgcttgctgtattttactatttatcttatgttttcctctcagacatctttgtttgtttatgtgcccatcctcttgccacatcgaactattttaattagacctttgcatgatatcatgctttgctgtgaccaaatatacggaagtctgttgttttgctcactttggtagtgtgcttcttgttggtgctgatatttacgattagatgtactacaacttttgttttgcttcatctcgttttcttgtattttttgtcaaactgcacaatacaagagaatccttggaccttctgatctctgaatgagtttgagaaggccttaggatctttctaatgttcgaccaaataactagatagcattaacttatataagtttgttcatagcctttttccacttctgtaaagaagcaccacgtaactaaacatgcaaacattgcttccgtaatctaattgggacactttctctgtctactccaatgcagctggctcaataaacatcagcaacatactgactgggaaatgcttggccaaaattaaggccagcgatttgtgcaagcagaagaaagcctggaagttccagagtacagccttggaggccctcgaggacatcacagcgctgtactatgacgaagagcgtgacgagatctacactggaaaccggcaaggcctcgttcatgtgtggtcgaattgaccgtgaatactgctttttgccaacaaggtgttggtcatctgtaattgaattgatttaacgactgcctcaggtggtgccggccacgaagaggtctgtgttgaggtgattcatatttatttcggcgaatactggtctcctaccattctaagccccccacatttgttgtagaattaacaattgttgttagtttcacatagactgtagcattggggagatgttgatgatacctttcggcttagtttcatgtcagttcttaaacctgtacggctgtaatgtaccttcatggtagcctctatgctatctgatgaaatagtgatatctctttctgctg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0482600, RefSeq:Os05g0482600