Os05g0488100

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Revision as of 10:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0488100| Description = Conserved hypothetical protein| Version = NM_001062419.1 GI:115464568 GeneID:4339149| Length = 2341 bp| Definition ...")
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Gene Name

Os05g0488100

Description

Conserved hypothetical protein

Version

NM_001062419.1 GI:115464568 GeneID:4339149

Length

2341 bp

Definition

Oryza sativa Japonica Group Os05g0488100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24047426..24049766

Sequence Coding Region

24047510..24048413,24048589..24048651,24048828..24048954,24049101..24049140

Expression

GEO Profiles:Os05g0488100

Genome Context

<gbrowseImage1> name=NC_008398:24047426..24049766 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24047426..24049766 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagttgctgctttagcttctagaatcaattggacagagtatcagttagcttcaattgaagctgctgcgattggtaacataattagggatggaaaggtcattgaaattgctccaaactcgaaaggaggacctctacaggatgtgctgagaagtttgcttgaaaaaaatgaattgatgataaataaactgtgtgatgaggatgctccactggaaagtaccgcttcaaggccgctctcaggcttctttttcaacacattatgtaaggagcctgggtatctcgcatttgacaccatacgctgcggcaagcttctttaccctgagtcacgctttgctgcattaccagagcccgtatctttccttgcatccacgcgtggccttgtctgcgtctgtggaaagacaacaggcttgtactatgtaaccaacacgaccaccttcaagtgggttcagctaccacgccacagttgtgatcatggagaaccagcagttgtcatcacattcgaggaacccctgacatcctgcttcgacggtgctgttgagcattatcatgtcgtcgctgccttccacctcaagggcagcgtctggacatctgagtcatactcctccaggactgggaggtggactattgctaaagatgcccctcctgctgtggaggtgaaggcggagtctggtgttggtacactgggctgcgccttctggcgcacttcccttgggtctatcctctgctatgacccggggaaggacctccttaaagtcatccctgcccctcgagtggtaaaccaagataccgtatgggagcttgggcaaatggagggagatcttactgtgacctgcttcaaggatgttgacggtttcctcacattgggcgtgcttaaaataaacaagcgactgtttgatgataaggttgctgcactctggacagttgtcggctcattctccggggagaaggttggcaaaagggctatgttgctccgctcacaaggcgccgcagaggtcgttgtctgggaacccttggaggagcgcgtcgtcgccatggaccttgaaggcctcgttactggcaactttgggcccctaaccaatgaagggtgtactccatgttttgttccttacgttccatcgtctgtgagtatttga</cdnaseq>

Protein Sequence

<aaseq>MEVAALASRINWTEYQLASIEAAAIGNIIRDGKVIEIAPNSKGG PLQDVLRSLLEKNELMINKLCDEDAPLESTASRPLSGFFFNTLCKEPGYLAFDTIRCG KLLYPESRFAALPEPVSFLASTRGLVCVCGKTTGLYYVTNTTTFKWVQLPRHSCDHGE PAVVITFEEPLTSCFDGAVEHYHVVAAFHLKGSVWTSESYSSRTGRWTIAKDAPPAVE VKAESGVGTLGCAFWRTSLGSILCYDPGKDLLKVIPAPRVVNQDTVWELGQMEGDLTV TCFKDVDGFLTLGVLKINKRLFDDKVAALWTVVGSFSGEKVGKRAMLLRSQGAAEVVV WEPLEERVVAMDLEGLVTGNFGPLTNEGCTPCFVPYVPSSVSI</aaseq>

Gene Sequence

<dnaseqindica>1354..2257#1116..1178#813..939#627..666#agccgccagcgaccgtccgccaggctcattcccgacgatgccggagcgcttcgatcctgccggccgccggcgcaggggcattctcccgccgcccgtcggcgcaggggcatcgacgggcctccgacgccggcctcctgacgtccatatcgccggcacaggcgcatcggcggaacggtcggagcccgcgctgtcgcctcctgaccgacagatcgaggtccgaccgccggcgtccgacgtctcatcggtgtgccggcacaggcgcatcgacggaacggtcggagcccgcgccgtcgcctcctgaccgacatggtaaaataacattatggccttgtttgtgatgcaagcatgacacaatttctcattgttagttgataaagggattgaattgaggcgctataaatgttaatttcaatgttcaatgatatacgacttaattaactagttttgtggtatgaataggatagatagtcccattttgtatgttttgttaatcttatttatatatttttgtttatataggtggtcttaacactccagaaaattgtgctataattcaaggtagagctaacagaaattgtgctataattcaaagtagagctaacagaagggatgatattctagacgagatggaagttgctgctttagcttctagaatcaattggacaggtatgcattttatattgatgaaattctggatgagatggaagttgctgctttatcttgtagaattaattggacaggtatgcattttatattgatgaaatctgaactaattataaatttacatttcattattttttttgtttatttagagtatcagttagcttcaattgaagctgctgcgattggtaacataattagggatggaaaggtcattgaaattgctccaaactcgaaaggaggacctctacaggatgtgctgagaagtttgcttgaaaagtaagtgtatttactaaacttgtttcatacatatttaacagaataacaaatttgtagtgctttttagctgatttttttctgcagttatatgatcactattcgttggtcacagattgcaatgttgttgatgtgttatccactaacaattgtgcttttgctcatatttatgtcctcagaaatgaattgatgataaataaactgtgtgatgaggatgctccactggaaagtaccgcttcaaggtagttatttttagatctactgcatctcatttgatttcgtgatgttttaaacatcagcatttgatgcaattctccttagatataggagatcctttactgactattttgtgatgatttaaacatctagtgtcattttgtagctcttcctttaaatttttctctcaccgctgtgcaggccgctctcaggcttctttttcaacacattatgtaaggagcctgggtatctcgcatttgacaccatacgctgcggcaagcttctttaccctgagtcacgctttgctgcattaccagagcccgtatctttccttgcatccacgcgtggccttgtctgcgtctgtggaaagacaacaggcttgtactatgtaaccaacacgaccaccttcaagtgggttcagctaccacgccacagttgtgatcatggagaaccagcagttgtcatcacattcgaggaacccctgacatcctgcttcgacggtgctgttgagcattatcatgtcgtcgctgccttccacctcaagggcagcgtctggacatctgagtcatactcctccaggactgggaggtggactattgctaaagatgcccctcctgctgtggaggtgaaggcggagtctggtgttggtacactgggctgcgccttctggcgcacttcccttgggtctatcctctgctatgacccggggaaggacctccttaaagtcatccctgcccctcgagtggtaaaccaagataccgtatgggagcttgggcaaatggagggagatcttactgtgacctgcttcaaggatgttgacggtttcctcacattgggcgtgcttaaaataaacaagcgactgtttgatgataaggttgctgcactctggacagttgtcggctcattctccggggagaaggttggcaaaagggctatgttgctccgctcacaaggcgccgcagaggtcgttgtctgggaacccttggaggagcgcgtcgtcgccatggaccttgaaggcctcgttactggcaactttgggcccctaaccaatgaagggtgtactccatgttttgttccttacgttccatcgtctgtgagtatttgaaggactgacgatgatcaggaataaaccagatgtgattagcatacaattgtatagtataagaaatacacctccatgttacgtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0488100, RefSeq:Os05g0488100