Os09g0497000

From RiceWiki
Revision as of 21:01, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0497000

Description

Mitochondrial substrate carrier family protein

Version

NM_001070092.1 GI:115479926 GeneID:4347459

Length

3839 bp

Definition

Oryza sativa Japonica Group Os09g0497000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19869590..19873428

Sequence Coding Region

19869644..19869895,19871337..19871431,19871899..19872232,19872341..19872578,19872809..19873065

Expression

GEO Profiles:Os09g0497000

Genome Context

<gbrowseImage1> name=NC_008402:19869590..19873428 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19869590..19873428 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtctccacgacgcgccgagccgcggcggcgccgggggcgggaagctgtcgctgctcgccagcgtcggcctcgccggcgccgggggcggggggagcggcggcgtgggaggaggaggcggaggaggaggaggaggagggggttacaaggagctgctcgtgatggcgctccccaaggacgacgacctcgacgccggcaaggtcgccgacgtcctcggcttccggctgcccgacgtggaaggggccgtgagggccttttttaggagtcgagaggttagagaatttgccagtggagcattagctggtgctatgtctaaagctgttcttgctcctctcgagactatcaggacaagaatggttgtaggagtaggatctaggcatatcggtggtagctttgtagaaatcatcgaacaaaatggatggcaagggctttgggcaggtaacacaatcaacatgatccgtattattccaactcaagcaattgagctcggaacattcgagtgtgtcaaaaggacaatggcggaagcgcaagagaaatggaaagaagatggatgcccaaagatacaaattggtaaagtgaaaattgaatttccacttcaatttttatctcctgttgctgtagctggtgcagctgctggaatagctggcacattggtgtgtcatcctcttgaagtcattaaggatcgcttaactattaaccgagaagtctatcctagtattagcgtcaccttcagcaagatataccgaactgatggaattcgtggtctctatgctggcctctgtccaacactaattgggatgcttccttatagcacatgctattactttatgtacgacacaatcaagacttcttactgccgcttacataagaagacgtctttgactcggcctgagcttctagttattggagctctgtcaggcctgaccgcaagcacaatcagcttcccgctggaggtggcgcggaagcggctcatggtgggtgccctgcaagggaagtgcccaccccacatgatcgcggccctggcagaagtgatccaggaggagggcctcccggggctctaccgcgggtggggggccagctgcctgaaggtgatgcccaattccggcatcacctggatgttctacgaggcctgtaaggacatccttttggcggacaaggacaagcgcaaagcttaa</cdnaseq>

Protein Sequence

<aaseq>MGLHDAPSRGGAGGGKLSLLASVGLAGAGGGGSGGVGGGGGGGG GGGGYKELLVMALPKDDDLDAGKVADVLGFRLPDVEGAVRAFFRSREVREFASGALAG AMSKAVLAPLETIRTRMVVGVGSRHIGGSFVEIIEQNGWQGLWAGNTINMIRIIPTQA IELGTFECVKRTMAEAQEKWKEDGCPKIQIGKVKIEFPLQFLSPVAVAGAAAGIAGTL VCHPLEVIKDRLTINREVYPSISVTFSKIYRTDGIRGLYAGLCPTLIGMLPYSTCYYF MYDTIKTSYCRLHKKTSLTRPELLVIGALSGLTASTISFPLEVARKRLMVGALQGKCP PHMIAALAEVIQEEGLPGLYRGWGASCLKVMPNSGITWMFYEACKDILLADKDKRKA</aaseq>

Gene Sequence

<dnaseqindica>55..306#1748..1842#2310..2643#2752..2989#3220..3476#aaagggcaagccccgcgaggcaagcggattcacgcacgcgcgccgccatccgccatgggtctccacgacgcgccgagccgcggcggcgccgggggcgggaagctgtcgctgctcgccagcgtcggcctcgccggcgccgggggcggggggagcggcggcgtgggaggaggaggcggaggaggaggaggaggagggggttacaaggagctgctcgtgatggcgctccccaaggacgacgacctcgacgccggcaaggtcgccgacgtcctcggcttccggctgcccgacgtggaaggggccgtgagggtaaggagccctcgcccatccctgcctgcgtttcttggttgctcgtgcggcgaaaggtgggaaatcttggcagttttgctcggtttgattatttttttatctccaatccgattgagagggcgaatggcgctgttcccccccatgcgacgcgtttgcttcgtttttaggatttttgttacgacgattcgaaacattgctcgggattcacaggtttcgtggcatgaacgagctgttttgctgcagaacatgtgaaagatttcgaccaggatccatggttgattatctgttcttaccagagattactctcgaacaagcaagcatctctaatctcgtcaacggcagtggtctcatgttgcgtagttcattttctctctctattatgcttatataggcgttcatatcagtctagcttcataaagaaaagcaagttctatcctgttcttttggttgagagacccaacatcatctgccgacttaatgttgacacgtaagagatgcagatgagactttactacttgttaggaccatattgatgtgtacaaccaacacgcatgtgtcatgtactcctgtggccatattccttcccaattctttttgttaacttacgttgctggttaggtgaaaatcggatctgatttcagaattttagatagcgatgtgtcgtcgtagtgtttgctacaagcgggagtgatactgaacaattaacggcagaggaatcccgaatccccactttataccctggtttatggagacagaaaatgttaggaaagattaaggggcttcaaagagtcaaatggaaaaaaacaagcttcaatattgattttgttttattatacttgattcagtcaactaattttatacgcttagccaacatatataaagaactttgactatgtttggggttattctccacgacgacaggtttggacaaagctgttcctttcacagatggaacaatatttcttcttcggtgctaaagttctgtgtcattttcatccaaagtatcttgaatgcgtccaaacatgtggaaaatcaattgtcttttagtcctttttacaattacttattccaactacaaaattgagttgcatacttgtgttataatatatgtgactatgaatttactaaagatacctttattgtgatctagctcttgtttcagcattccattttttcattcttaaccactgaccaaccaaacctttggtagagattttgctgtaatattgatgattgatgatgggcttagataacgtagtaaatgttcttattctgaacccgcctgtctatataaaacaaatttgaccaagtacttaactgaatggctctgaatctgtccttatcacacagatatgcatggtttaataatatccatgggtgattttgatgcctatacaatatacactgttttttgagatgttccctttcattttcattgcaggccttttttaggagtcgagaggttagagaatttgccagtggagcattagctggtgctatgtctaaagctgttcttgctcctctcgagactatcaggtatctatcgaactctctctctctctctctaataaagcatttgagcatggtcttacaacttagatgtaaatcttaaaaaccaaaagatataacgtgctacaacctttgcaaacaccatcgcaatgatatgctccaaaattcatcatctgtaaattaactccttgaggcatatagtttaatgttgtaaccaactttcaccatttaatagttaaacaggaaatatttctagtctcaaagttcaatagtcacattttcacgtgtaaacatattctttgtttagtgcataacataaccagtatttgtaggattgtttgctttcctatgagcagtggagattgtagtctctgtatgcatacatcattttagatatatgattcccaactgtgttgttgaagcatgcagtttgttgcatatcaaagactaatttgtacctgtgtcgtaatatgttggtatgttattaatttcaggacaagaatggttgtaggagtaggatctaggcatatcggtggtagctttgtagaaatcatcgaacaaaatggatggcaagggctttgggcaggtaacacaatcaacatgatccgtattattccaactcaagcaattgagctcggaacattcgagtgtgtcaaaaggacaatggcggaagcgcaagagaaatggaaagaagatggatgcccaaagatacaaattggtaaagtgaaaattgaatttccacttcaatttttatctcctgttgctgtagctggtgcagctgctggaatagctggcacattggtgtgtcatcctcttgaagtcattaaggtgattgctgaactgacctgttgaaaataaaaactatttgtcattccatatattcattttctttggaacagtataacttcgcctgatatcttccatattttatgacaggatcgcttaactattaaccgagaagtctatcctagtattagcgtcaccttcagcaagatataccgaactgatggaattcgtggtctctatgctggcctctgtccaacactaattgggatgcttccttatagcacatgctattactttatgtacgacacaatcaagacttcttactgccgcttacataagaagacgtctttgactcggcctgagcttctagttattggagctctgtcaggtaaatgattctgcttcatctacatctatatcatttcaccatcttcattagccggttcagcactgtcttaaaatctgtgtaccaggttatcccctgttttgacttgtgcaattctctactatctacatacaatgaagatgcaaaactactgctccttcaaacaaaatgttagcttgaaatttgaccaaacagctggttgcattgctcatatctggctgttgaatctgcaggcctgaccgcaagcacaatcagcttcccgctggaggtggcgcggaagcggctcatggtgggtgccctgcaagggaagtgcccaccccacatgatcgcggccctggcagaagtgatccaggaggagggcctcccggggctctaccgcgggtggggggccagctgcctgaaggtgatgcccaattccggcatcacctggatgttctacgaggcctgtaaggacatccttttggcggacaaggacaagcgcaaagcttaaggggaatgtggcatcgagcaactgcaacctgacgcattgcatatttgcaacgtagaaaacaataatgagttacaagattcttgtatcggtgggattcctgatcttttcccagttttcgagtcccaccctggatgacgccgaaaaagtggctagataggagacgctgttcttttttttggctggtggctgggagagcatgtgttgtttctcgctaatttggaatgcctgattaattacatgttgtctaagtgttaaccgtggggtttacacacgagaatggctgaaaatgttggcatgtacctctacctgatcttcaggtgaatactatcaaatcctgtgaaatttctctcaaatctccgttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0497000, RefSeq:Os09g0497000