Os09g0500600
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os09g0500600 |
|---|---|
| Description |
Similar to DNA topoisomerase III beta-1 (EC 5.99.1.2). Splice isoform 2 |
| Version |
NM_001070113.2 GI:297609740 GeneID:4347482 |
| Length |
13764 bp |
| Definition |
Oryza sativa Japonica Group Os09g0500600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:20022898..20036661 |
| Sequence Coding Region |
20023039..20023059,20023199..20023255,20024186..20024289,20030447..20030540,20030972..20031071 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:20022898..20036661 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:20022898..20036661 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgcccacggttctgatggtcgcggagaagcccagcatcgcgctctccatcgcctccgccctctccggcggccgcatgtctacaaggaagggaagtacagatgtccatgagtttgatgggatgtttcagggttctcatgcatttttcaaagtgacatcagtcattggacatgtcttgagtgtagattttccacctgcatatcagaattgggaagggactgatccaatggatctatttgtggctccagttctgcgatctgaatgcaaccctaaggctcatatccgcaggcatctagctcaggaagctcgaggctgcacctacttggtactctggcttgattgtgaccgagaaggagaaaacatatgctatgaagtaattgattgcactggaattcctaaaagtgaggttggcagaagaattttccgagccaaattttcgtccgttactgagaaagatataatggatgctatgaataatcttgttttgccaagtaaagatgaggcactagcagttgatgctcgccaagaaattgacttgaaggtaggagtagcatttactcgatttcaaaccagatattttcaaggaaaatatggaaatctcgactcaagagtaatttcgtatggtccatgccaaacacctacacttggattctgtgtacaacgctatcagcagattaccacattcaaaccagagaaattttggtccttgaaaacttatgttatcaaggatggtaatgaaattcagcttgaatgggataggaagaaactttttgattttgatgttactgtaatgttccaaaagatggtggccagtgatggtattttaaaagtaaccgacatatcagtgaaggaagagtgcaaagcccgcccgcctggccttaatacagttaatttgcttaaggttgcatcaagtgcactaggtattggacctcagacagcaatgcacttggcagaaaggctttatacccaaggattcatcagttatccacgtacagagagcactgcctatccttcatcatttgattttagaagtgcactcgctgcacttgcacataatcctttgtggtccaatgatgttcggacgttactggacactgggtttgttaagcccaaacagggtcatgatgctggggaccatcccccaataactccaatgagattggcaacagaagaagctttgggaactgatgcttggaggctgtaccagtacatttgtcagcattttattggcactgtcagtcctgattgtagatatacgaggacttccattgagttcacttcaggtggagagactttccactgtgttggcaaccgggtcacttctaaaggatttacttctattatgccatggctggctgtgagtgagaataatatccctgcatataaaaagggcgatgctgttagcatccataaggttgacatatatgagggtagcaccacacctcctgactaccttagtgagagtgaattgatctctctcatggagaagaatggcataggtacagatgcatcaattcctgtgcatgtaaacaacatctgcgagcgtaattatgttcaggtgaattccggaagaagattagtaccaacacccctgggaactacattgataagagggtatcagtgcattgatgctgatctgtgcttaccagatatccgaaggtttattgagcagcagattactctaattgcaaaaggtgaagctgaccatcttcaagttgtgcagcatgttcttcagcagtttatgaaaaagtactcgtactttgtgaaaaagattgaaaacatggatgctttgttcgaagcacagttttcacctttggctgactctggacgtttactgagcaagtgtggaaaatgtgctcggtatatgaagtacatttccactcagccaatgaggctgtactgtgtaacttgtgaagaggtctactatcttccccagaacggttccattaagctttacaaggaaatcatttgcccccttgatgggtttgagttgctactgttttcaatggttggccctgatgcaaaatccttcccactgtgtcctttttgctacaacagtcctccatttgaaggcatcgacaaactcttcggtgcactcaagcttgatgacactggcaaggttgggaaaggggctggcatgccatgcttcctctgcctgcaccccacatgtaaacaatctatgatcactcaaggagtttgtgcttgtcctgagtgtactggtaccctaattcttgatccagtcagcgcacccaaatggcggctttactgcaatagatgtaactgcattgtcctgctcccacatgccgctcataagatcagtactacagataagaagtgcccaacatgtgagtctactatcatcgaagttgattttaacaagaaaactaccccacttaaggatggagctactttgcatgagggttgcatcttgtgcgatgagctgttgcattcgctcattgagatgaagcatgggaagtcattttttatgaggagaggtagaggaagaggcaggggtagaggtcgagggagaggaagcagtaggggaagacgggggagctcaagacacgatgatcctaagatgagcttcagagatttctga</cdnaseq> |
| Protein Sequence |
<aaseq>MAPTVLMVAEKPSIALSIASALSGGRMSTRKGSTDVHEFDGMFQ GSHAFFKVTSVIGHVLSVDFPPAYQNWEGTDPMDLFVAPVLRSECNPKAHIRRHLAQE ARGCTYLVLWLDCDREGENICYEVIDCTGIPKSEVGRRIFRAKFSSVTEKDIMDAMNN LVLPSKDEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGF CVQRYQQITTFKPEKFWSLKTYVIKDGNEIQLEWDRKKLFDFDVTVMFQKMVASDGIL KVTDISVKEECKARPPGLNTVNLLKVASSALGIGPQTAMHLAERLYTQGFISYPRTES TAYPSSFDFRSALAALAHNPLWSNDVRTLLDTGFVKPKQGHDAGDHPPITPMRLATEE ALGTDAWRLYQYICQHFIGTVSPDCRYTRTSIEFTSGGETFHCVGNRVTSKGFTSIMP WLAVSENNIPAYKKGDAVSIHKVDIYEGSTTPPDYLSESELISLMEKNGIGTDASIPV HVNNICERNYVQVNSGRRLVPTPLGTTLIRGYQCIDADLCLPDIRRFIEQQITLIAKG EADHLQVVQHVLQQFMKKYSYFVKKIENMDALFEAQFSPLADSGRLLSKCGKCARYMK YISTQPMRLYCVTCEEVYYLPQNGSIKLYKEIICPLDGFELLLFSMVGPDAKSFPLCP FCYNSPPFEGIDKLFGALKLDDTGKVGKGAGMPCFLCLHPTCKQSMITQGVCACPECT GTLILDPVSAPKWRLYCNRCNCIVLLPHAAHKISTTDKKCPTCESTIIEVDFNKKTTP LKDGATLHEGCILCDELLHSLIEMKHGKSFFMRRGRGRGRGRGRGRGSSRGRRGSSRH DDPKMSFRDF</aaseq> |
| Gene Sequence |
<dnaseqindica>142..162#302..358#1289..1392#7550..7643#8075..8174#8604..8847#8963..9125#9205..9324#9653..9732#10250..10528#10706..10874#10962..11090#11219..11431#12133..12312#12777..13424#gggggggggggggggggcccaaaacccagcccactaaaaccacactccgatccgaaaccgtcttcgtcttcgtctccggccgcctctccgcctccactcttcctcctcccggcggcgagcttcccctctccgcccgcgcccatggcgcccacggttctgatggtaagcagcaccagccgctccgctcccggcgtaccgcgcggcgttgcggccgccgtcggtggcggccgcagcgacccggggggactctccgctccacacagatgttctcgccctcactctcggatcgccgcttctgcaggtcgcggagaagcccagcatcgcgctctccatcgcctccgccctctccggcggccgcgtaagtcccccactcccgcccgctaaaaccatccgcaacctgtttgattttttttttcgttttcgaattcgaattcggctgtggcttgaacacccgaacgtggattgtttcatagcaggttctaacctgggaactttagctgtgagttgtttatagggcaatggctaggggtttgaggcttttggctggtcgtcgacatcattgcgcggtagggttagttccagggacttggggaattcaaagatggtagacactgagaggattagattcactgacatggtaaaatggtaaatggatttgtcctttatgatgaatatccccgttttcacccaaagacctctgcttaagctagtataaatctattgatgaatgttatgttactacctgatctatccatggcatgaaatcgctatcacccgactgtagattgtttcgccgtagattcacagcgcaagttctgccctagaaactaaagtagtgagatgttattaggacaatggctagggattttcgcttggtagaccgtgggcatcattgccactgtaggggtagcttcagggactgggaaaattcaaggatattatagagctgataggattgggtggactgacatggtaaaattgtacaatgtctttgcctttccctatgatgaatgatcaaatatcccctgcttccaccaaaagacatctgcttaagctagtaaatctatagatgaattttatgtaattatccaatatctctgcggcatgaggtggccatgcattttgggtggttgttgccgatacattatctatatcacgtgggtcagattttaaattgggttgtttgccttagctgttcagaagtatcgcactttcactgctgttgtgcattacacatttcttttctgaggtgaatgtcattgcaaaacctttttcgatgttcatgcagatgtctacaaggaagggaagtacagatgtccatgagtttgatgggatgtttcagggttctcatgcatttttcaaagtgacatcagtcattggacatgtcttgaggtttgtgcatattttctcccattcttctaagtgcctttgtcatgattatatcacgtgatgtgctacttttctgtgcaatcaagaactacatatctcaactattgtacatgcgtattctctatgtaactgtttttacatagaaacagttgaccaatgcataattgcaacttgcaaggttgatatatgatgcaaatgattgattattattccattatagctggataatcaatatagcagacactaatgttttcaatgctgacttcgaatataaaacatgcatttgtcatcatcattatcttgtttggttcatgtgacttgagttctgttccatctctagcttaccccaacttgtttgggactaaaaggctgtcgtttgttggataagtctttgtggtccttggtcgtgattcttctttttgcttttgggtagtttcacctttttcaggacagcatctaccctttagcatatttttcagttgctaggacagctgcggttagtaggacagcagcagttagcatctcctttatgcctcctttatgctttattcagtttggatgccctctaggacagcatcccattcaaatttcgaattttagactaggagggtgcagcaataggctagcagccagctatggctatatatatgtatccaacctccctcgggtaggtatggcttttgtgtttagtcaatgaagaaaaccagaaaattgccccatctcgagtgccatcctcttctcaatgagagtaaccattgaaattctaacatctggtatcagagccacactttcctgtaggctaaacatctcttgttccaccccctcccaagctcggttgagctctcagccagcagcagcaacagcaccggttgctcctccttcccctttcccttccccctctccacgcagcagccccccggaggtgcgccatgtccgacgctcggtctcggcgttcggtcgccttgagcactcggcgtcagcaggacgccgagctcgccgcagtagaagagcgcaggcgagcaacgactcagaccactgcagcagcagcgagggcggccagactggcggcagcggagttggcagcagccagggcggaggcggaggcggaggcgacggaagatgcggcacgtgcggcggaggtagaggttgagaccttgcgcagcagcatcaacggctccatcgccggcgacatcaccgccgacagggagcttgaggagctggcaagaggaagggcacgggagcgagcagagcggtgggcagcagcccacctccacggcggcggcggcggcccaagggaccgcgcgcccgccgacgggaacccagacgggcgcaggcgtgccggcggcagcccggagcccgcacgcggccctcgcaggcagcacggctctctctcccctgaccggcgccatggtcaccacggcgtccagacggtggtcagggactttggtcccggcggtgggtggcctaccctcaccaaaaccaactacatcgagtgggccgcggtgatgagggtgaggctccaggtgcggcacatgtgggaggcagttcggtacggtgacgtcgactacgacgaggatcggcgggcactggatgcccttatcgctgcagtcccgcccgagatgcagttctcgctttcccagaagcggactgccaaggaggcctaggacgccatcgctgcggcacgcatcggcagcgaccgcgcccgcaagtccacactgcaggcactccgcaaggagtgggagaacctggccttcaagccaggtgaggatgttgatgactttgctctccgtctcaacactctcttgcagaaaatggtgcagtacggcgacgacacctacgacgaggagagagctgtcgagaagctcttccgctgcgtccctgagaagtacaggcagatcgctcgctcgattgaatctctgttggacctctccacgatgtcgatcgaggaggcgttaggtcgcctcaaggtcgtcgatggtgatgagccacagcctctctcggggcccatcaccatcggcgggaagctccatctcactcgggagcagtgggaggcctctcagggtgacgggaggaagggggagtcatcttccccgataggcggccgtaagccgcgcaaggcgcggggaggtgtccagctacggtgggcgcgaagacgtgccgagggtggcgcccgcagaggcgcccagggcgttgccaccggcaaccacaagccggcacgagacgacgcctgccgcaactgtggcaagcttggccattgggccaaagactgtcgacagccacgacgtggccaggcccacgtcgcacgggtggaggaagagccggctctgctcctggctcacgcaagcatcgagctacctccagcgacaccggccgcagcggctttcctccaccttgatgagccgaaggtacttgtctccctctgcaacgactccagcaacgacaaggctgatgggtggtacctcgaaaccggcgccacccatcacatgaccggccgacgggagttcttcaccgagttcgactccagcgtccgaggctccgtcaagttcggggacgcctccggcgtggagatcaagggtgttggctccgtcaccttcaccgccaagtccggtgagcacaggctgctcaccggagtctactacatccccgcgttgaggaattctatcatcagcgtgggacagctggatgagaatggctcacgcgtgttggtcgaggacggactcatgaggatttgggatcgctgtcgttgccttcttgccaaggtaaccagaggcactaatcgactctacatcctcagcgcgcaggtcgcacaaccagtttgcctcgccgctcgtcgggacgacgaggcgtggcagtggcacgagcgcttcgggcacctccacttcgaggccctgaagcagctcagtgccaaggagatggtgcgaggcatgccgtgtcttgaccacgtggagcagctctgcgacgtctgcgtggtgacgaagcagcggcggctcccctttccccagcagacgagcttccgagccaaggagcggctcgagctcgtgcacggggacttgtgtggcccaatgacaccggccacaccaggaggacgacgttacttcctgctgctcgtcgacgacctctcccgctacatgtgggtgatggtcctcggcagcaagggagaggctgcggacgccatcaggcatgcgcaggctgctgcagaggcggagtgcggccgcaagctgcgcgtgctgcgcaccgacaacggcggcgaattcacagcggctgaattcgcgtcgtactgcgctgatgagggcattcagcgccactacaccacgccgtacagcccgcagcagaacggcgtcgtcgagcggcgcaaccagacggttgtggggatggctcgggccctcctcaagcagagggggatgccggccatcttctgggggga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