Os05g0489800

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Revision as of 10:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0489800| Description = Centromeric histone 3 (Histone H3)| Version = NM_001062429.1 GI:115464588 GeneID:4339159| Length = 2484 bp| Definit...")
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Gene Name

Os05g0489800

Description

Centromeric histone 3 (Histone H3)

Version

NM_001062429.1 GI:115464588 GeneID:4339159

Length

2484 bp

Definition

Oryza sativa Japonica Group Os05g0489800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24114869..24117352

Sequence Coding Region

24115120..24115172,24115530..24115605,24116043..24116117,24116212..24116342,24116884..24116911
,24117030..24117055,24117180..24117285

Expression

GEO Profiles:Os05g0489800

Genome Context

<gbrowseImage1> name=NC_008398:24114869..24117352 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24114869..24117352 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcgcacgaagcacccggcggtgaggaagtcgaaggcggagcccaagaagaagctccagttcgaacgctcccctcggccgtcgaaggcgcagcgcgctggtggcggcacgggtacctcggcgaccacgaggagcgcggctggaacatcggcttcagggacgcctaggcagcaaacgaagcagaggaagccacaccgcttccgtccaggcacagtggcactgcgggagatcaggaaatttcagaaaaccaccgaactgctgatcccgtttgcaccattttctcggctggtcagggagatcactgatttctattcaaaggatgtgtcacggtggacccttgaagctctccttgcattgcaagaggcagcagaataccacttagtggacatatttgaagtgtcaaatctctgcgccatccatgctaagcgtgttaccatcatgcaaaaggacatgcaacttgccaggcgtatcggtgggcggaggccatggtga</cdnaseq>

Protein Sequence

<aaseq>MARTKHPAVRKSKAEPKKKLQFERSPRPSKAQRAGGGTGTSATT RSAAGTSASGTPRQQTKQRKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREIT DFYSKDVSRWTLEALLALQEAAEYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGG RRPW</aaseq>

Gene Sequence

<dnaseqindica>2181..2233#1748..1823#1236..1310#1011..1141#442..469#298..323#68..173#acgccgcttcagtttgaaaacccaccgccacgtcgccgccgccgccgccgccgccgccgacgccgagatggctcgcacgaagcacccggcggtgaggaagtcgaaggcggagcccaagaagaagctccagttcgaacgctcccctcggccgtcgaaggcgcagcgcgctggtggtgagcgcgcgctctctccccctctgcgtttctttttttttttcctttttctttcaatggcggtggatggtgaagcttatgccccccccccccccttcccgcctcttgcttgtcccctttgcaggcggcacgggtacctcggcgaccacggtgcgtgcgggagcgggtctttcgtttggtgattttttgattttgtggggggatatgtttttgttttgtatcttggctggatggatggcttgctcaccacctgtttgatggaatgcagaggagcgcggctggaacatcggcttcaggtgcgttctcttgggggggtttctagggttattcatgggctcgttggagcttttcctttctgtctcttggattccgggggacctgaggggctcaatgtgtcccttttcttgctctgttttaccgtgtgctgtactttcctcatcgttgttttctgaatatattataagaacagtagttgcagaaagatcttcaattgctcatcagtcaaagcttttcttgttttcattctgaaataatagcaaatccagtttggtccatggaggggttatctgaaacattatgaccataaaacatggtattaagcattgctagccaagaaatgtgtggtttttagacacgatgttgataggtgatttttatgctcatccattattagtctttgcatcgtgggaactgatttagtaaactttctttagtgtcatggttcaaatagcgtctgttctacctagatgataggtatccatatggaagtcttggctttggaattgctctccttttgttctcctgtgattaaataactttaacatgtgtgtgaagcagggacgcctaggcagcaaacgaagcagaggaagccacaccgcttccgtccaggcacagtggcactgcgggagatcaggaaatttcagaaaaccaccgaactgctgatcccgtttgcaccattttctcggctggtgggtacatcctgaacctgccttctctctatatcaaatatttcgtagtgcaaacttgtgtgatggaagctttttgtgccgataaaatttgcaggtcagggagatcactgatttctattcaaaggatgtgtcacggtggacccttgaagctctccttgcattgcaagaggtcagtggtcaaacctgtttattataagtttacaactgatggcttagttagggaagggtcagactgaattatactgtttaaattccattctgcttcaagactcaagtcacggctcaagagtgtaactgaaaaatgtacaaatcttccatgatcaataaaatgaatatctctgtgtgttgatttatgagtcagattgctaaattattatcctttttcagtagaacacctatatactacaaatatgcaacctccctattttgttgtgtctgttcaagattgctatcatagagtataccaatttcagttccttctttccagccatgtctgtttctgcataaccaggaaaaggaacaaagagctgacttaattctcacaaaataaattatgttatttacttgctgtcctgcaaatttccagtggttttccctctcctgcaggcagcagaataccacttagtggacatatttgaagtgtcaaatctctgcgccatccatgctaagcgtgttaccatcagtaagttgtcattctgaatgaacttttctctttctttttctccctttatattattatgctaaatggatatcatatatgccacagcctacatgatatcatatacgcatccacttcaaaagcattctatttttttataggaataacattctaattgcaggatgattcttaatacatgtgtttatatttaatgtcatatctagttttcatactcttaaatttatcatgattattgattaaacatagggagaattagttggtttgtgagttttgaggtgtgaaatatgctgcttgctattccctgtaaagcttatcagcgttgtcattgtgtggtttaacaaataaacgtttgttctgcagtgcaaaaggacatgcaacttgccaggcgtatcggtgggcggaggccatggtgaaaatttgtttgcgagccatgcagcatgatggacaaggagcaacatgtgtcgttgattaacattttagaaagtagtgtagatgtatcttcacatagggatcaacttacccttcgttcccattctaattcagttgatgttagtatttaccttttgctccatttggattggtcgaattcaggatttcatcaaacagtcgattgtgaaatgtgaaccaggaattgttgtgttgattgcaataatgggttcctctc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0489800, RefSeq:Os05g0489800