Os05g0490000

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Revision as of 10:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0490000| Description = Krr1 family protein| Version = NM_001062431.1 GI:115464592 GeneID:4339161| Length = 2260 bp| Definition = Oryza sat...")
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Gene Name

Os05g0490000

Description

Krr1 family protein

Version

NM_001062431.1 GI:115464592 GeneID:4339161

Length

2260 bp

Definition

Oryza sativa Japonica Group Os05g0490000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24122775..24125034

Sequence Coding Region

24123007..24124977

Expression

GEO Profiles:Os05g0490000

Genome Context

<gbrowseImage1> name=NC_008398:24122775..24125034 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24122775..24125034 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagcagaggagggaggaggagaagaagaagaaggacatcctcgcgggctccgacaatgagtccgatggaggcggcggcgaggaggatctctccaagatccagatcaacgaggagtacgcccgccgcttcgagcacaacaagcggcgggaggcgctgcagcgcctggaggagcgcaagaagaagggcctcgtcccgccggaggaggaggaggaggaggacgacgacgacgacgagtccttgtcggacgacgatgacgccgccatcgcgtcccgccgcgtcgaccgccagatgttcgaggtcatccgccgcatccggcgcggcgacgccgccatcctcgacgcgaaggccaagatgtattcctcctcgtcggagagtgaacccggcgacgaggagggggagaagcccaagaagacgaagaaggagcggcccctgtacctcaaggacgtgaacgctcgccacctgctcgaggagggccccgagttcgcggcgcaggctagccatggcggccacagcagcagcaagtacgacaagatcgcctacgacgagcagcagaggaaggggctggaggctttccttgcggcggagaaggcggcattaggcaatggcgatggcgatggcggcgaggatgatgacgatttgttccaagtgaagccgaagggtggagatggtggtaacaaggaggatgatgacgaggagaagaaggagactgagcagatactgattgatattttcggcaaagacgaggagctggacgagaacagcaagttcctgaagaaattcttcctcgagaggccgtatctcgagacgggcagcgagaagaaatactctccggatgatatccaggaggtatcggacgaagaggagcatctcatagagcaggaggattatgagaccaggtataacttccggcatgaggaagcagccgcgactggtgcggatgtaatggacagggtgatggggcattcgcggtttgtcgaggggtctgtgaggaagaaggagagcagcaggaagcagcagcgcaagaacaaggaggagcggatagcacgggccaagcaggagcaggcagaggagttgaagcatttgaagaacttgaagaagaaagagatcgccgagaagcttgagaggatccggatgattgccggaattgatagcgatgcagcttgcaagctcggagccgatgacttggaggaggattttgatcctgaggagtatgacaggaaaatgaaggagacattcaatgacaattactatgaagcagatgatgttgatcctgaatttgggagtggtgaggaaattgatttggaaaaaccagactttgacaaagaagatgaactgcttgggctacccaaggactgggctcttgatgggcaagatggatcgtctgcagcagctgagggggcttctcagaaaaagaaaggtggaaaagatattgcaaatggtgaggggacaaatcagaaaatgaaaggaaaaatttctttgaaggacaaggtggagcttgagaaggagatggaagagtactacaagttagactatgaggacactattggagatctgaagactaggttcaagtataagcaagttaagccgaacagtttcggcctgagcacctatgagatattggcatcagatgacaaggatttgaaccagtatgtatccatgaagaagatagctccttacagggaggcagaatggaaggtgacgcatcataagaaactgatcaaggattcgatccttggaggacaggataaagaaggcaagaaggtcaaaaagaagaagtctaagtctgaggaaggccctgcttcatcagaaccagagaaggagctgccgaatgaacagggggatgcagatggcaaggcaaaatcaaccagaagtgaacgaaggaagcgtaggaggagggagttgaagatgaccaccgaaaggcaagcagcctatggaaagataaaccctaagcgtcacaagagccattga</cdnaseq>

Protein Sequence

<aaseq>MKQRREEEKKKKDILAGSDNESDGGGGEEDLSKIQINEEYARRF EHNKRREALQRLEERKKKGLVPPEEEEEEDDDDDESLSDDDDAAIASRRVDRQMFEVI RRIRRGDAAILDAKAKMYSSSSESEPGDEEGEKPKKTKKERPLYLKDVNARHLLEEGP EFAAQASHGGHSSSKYDKIAYDEQQRKGLEAFLAAEKAALGNGDGDGGEDDDDLFQVK PKGGDGGNKEDDDEEKKETEQILIDIFGKDEELDENSKFLKKFFLERPYLETGSEKKY SPDDIQEVSDEEEHLIEQEDYETRYNFRHEEAAATGADVMDRVMGHSRFVEGSVRKKE SSRKQQRKNKEERIARAKQEQAEELKHLKNLKKKEIAEKLERIRMIAGIDSDAACKLG ADDLEEDFDPEEYDRKMKETFNDNYYEADDVDPEFGSGEEIDLEKPDFDKEDELLGLP KDWALDGQDGSSAAAEGASQKKKGGKDIANGEGTNQKMKGKISLKDKVELEKEMEEYY KLDYEDTIGDLKTRFKYKQVKPNSFGLSTYEILASDDKDLNQYVSMKKIAPYREAEWK VTHHKKLIKDSILGGQDKEGKKVKKKKSKSEEGPASSEPEKELPNEQGDADGKAKSTR SERRKRRRRELKMTTERQAAYGKINPKRHKSH</aaseq>

Gene Sequence

<dnaseqindica>58..2028#ctaattacccccagcttcgccgccgccgtcgtcgccgtcgccactgcagcggcagccatgaagcagaggagggaggaggagaagaagaagaaggacatcctcgcgggctccgacaatgagtccgatggaggcggcggcgaggaggatctctccaagatccagatcaacgaggagtacgcccgccgcttcgagcacaacaagcggcgggaggcgctgcagcgcctggaggagcgcaagaagaagggcctcgtcccgccggaggaggaggaggaggaggacgacgacgacgacgagtccttgtcggacgacgatgacgccgccatcgcgtcccgccgcgtcgaccgccagatgttcgaggtcatccgccgcatccggcgcggcgacgccgccatcctcgacgcgaaggccaagatgtattcctcctcgtcggagagtgaacccggcgacgaggagggggagaagcccaagaagacgaagaaggagcggcccctgtacctcaaggacgtgaacgctcgccacctgctcgaggagggccccgagttcgcggcgcaggctagccatggcggccacagcagcagcaagtacgacaagatcgcctacgacgagcagcagaggaaggggctggaggctttccttgcggcggagaaggcggcattaggcaatggcgatggcgatggcggcgaggatgatgacgatttgttccaagtgaagccgaagggtggagatggtggtaacaaggaggatgatgacgaggagaagaaggagactgagcagatactgattgatattttcggcaaagacgaggagctggacgagaacagcaagttcctgaagaaattcttcctcgagaggccgtatctcgagacgggcagcgagaagaaatactctccggatgatatccaggaggtatcggacgaagaggagcatctcatagagcaggaggattatgagaccaggtataacttccggcatgaggaagcagccgcgactggtgcggatgtaatggacagggtgatggggcattcgcggtttgtcgaggggtctgtgaggaagaaggagagcagcaggaagcagcagcgcaagaacaaggaggagcggatagcacgggccaagcaggagcaggcagaggagttgaagcatttgaagaacttgaagaagaaagagatcgccgagaagcttgagaggatccggatgattgccggaattgatagcgatgcagcttgcaagctcggagccgatgacttggaggaggattttgatcctgaggagtatgacaggaaaatgaaggagacattcaatgacaattactatgaagcagatgatgttgatcctgaatttgggagtggtgaggaaattgatttggaaaaaccagactttgacaaagaagatgaactgcttgggctacccaaggactgggctcttgatgggcaagatggatcgtctgcagcagctgagggggcttctcagaaaaagaaaggtggaaaagatattgcaaatggtgaggggacaaatcagaaaatgaaaggaaaaatttctttgaaggacaaggtggagcttgagaaggagatggaagagtactacaagttagactatgaggacactattggagatctgaagactaggttcaagtataagcaagttaagccgaacagtttcggcctgagcacctatgagatattggcatcagatgacaaggatttgaaccagtatgtatccatgaagaagatagctccttacagggaggcagaatggaaggtgacgcatcataagaaactgatcaaggattcgatccttggaggacaggataaagaaggcaagaaggtcaaaaagaagaagtctaagtctgaggaaggccctgcttcatcagaaccagagaaggagctgccgaatgaacagggggatgcagatggcaaggcaaaatcaaccagaagtgaacgaaggaagcgtaggaggagggagttgaagatgaccaccgaaaggcaagcagcctatggaaagataaaccctaagcgtcacaagagccattgagctttggagattcggcatagttcatctagaaaattattatttttttgtttatgtgatgcatttttgtctgggcgttgtccttgtggaagcatctgtttagggcattcatgatatatctggagctgtgaacccgttattgtcacagtggtaacatatggttctatggaagttttgcttacatattgtaatttcatgagccatataatctttttgtttttacatttgcctctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0490000, RefSeq:Os05g0490000