Os09g0514500

From RiceWiki
Revision as of 21:02, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0514500

Description

Hypothetical protein

Version

NM_001070195.1 GI:115480132 GeneID:4347567

Length

5653 bp

Definition

Oryza sativa Japonica Group Os09g0514500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20685603..20691255

Sequence Coding Region

20685666..20685815,20686687..20687065,20688877..20689011,20689099..20689178,20689362..20689422
,20689505..20689590,20689697..20689766,20690121..20690293,20690361..20690433
,20690839..20690996

Expression

GEO Profiles:Os09g0514500

Genome Context

<gbrowseImage1> name=NC_008402:20685603..20691255 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20685603..20691255 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtggagcgtcgtggtggtggggaggtgaacggggtggtggagatggaggacgcggtggggatactggtggactacctggtgcggccggcgctgcggaaggggagcaggatgacgccggagaaccaggccgacgtcgcgcgccaggttcatatggcagtcattctgtataactattaccaccggaagcagttcccacagcttgcttttgctgatgcaatgaggttcttcaaatgtgcatctcttactcttggtgacagtttgctcgcgtactccaatatggtccaccaacatgagaagagttctggaagtcctggggagggtgtgaatctctctgtgactgacaaagcagtcgtggatgcgtgtggaattgctgaagccctcgacgcaaaccaagactctccagacatggccatgtggccaatttcaaaggtcgctgtgcttcttcttgattcaactaggaaaagatgtctgctggagagtggttctgtcggtaaaaatgttcgctcccttttggagaaagagattgacagtgagatacccagagttaaaaatgcactgcctcctgttgtagatgtgtcaactatgaagttcgtgagctgttcagttaatgtaaaagaaacagcagcagcaaatgcaggatttgtggatatggaagcaggtgttaaaatgaacagcaacaaaagaagagagaatcactctctagacttaaatatttctcatgatatggctatggagaaggcacttgtaataaagaatactgagttggaatggagaagtgcagaagtgtcaaaaaagtcagattttcatcaaggtggcggtgctaaggacaacaaggatctgaagtttgcttccttcaagtcatatctgaaaaaacgggatgatcttcatcgcaagcaacgcatgattgaagatgaaactgttcaatttgatatggacatccagtcagtctttgctggaggggagtggacaccagaagcgatgtcactactagaaaaatatggaattcttgtcgatagcttagatatggtggaagttaatggttcatcctattctggagatggatatgaaaccttaaccattgagaggaagaaattgacagtggaaagactcctccgcaataaatgccaggagttggatgaggtctgccgtgagaataattggattcttccgagatataaagttatgccatcactaacagatggcatgtacgtggccaatgtagatattgcatgcctggagttcagccaaatgacatttggcgatccaaagacgaaccctcgtgatgcacgggagtctgcagctgccaacctgctggctgagcttcttaagaaggccgatgccaacagggagcacacctga</cdnaseq>

Protein Sequence

<aaseq>MEVERRGGGEVNGVVEMEDAVGILVDYLVRPALRKGSRMTPENQ ADVARQVHMAVILYNYYHRKQFPQLAFADAMRFFKCASLTLGDSLLAYSNMVHQHEKS SGSPGEGVNLSVTDKAVVDACGIAEALDANQDSPDMAMWPISKVAVLLLDSTRKRCLL ESGSVGKNVRSLLEKEIDSEIPRVKNALPPVVDVSTMKFVSCSVNVKETAAANAGFVD MEAGVKMNSNKRRENHSLDLNISHDMAMEKALVIKNTELEWRSAEVSKKSDFHQGGGA KDNKDLKFASFKSYLKKRDDLHRKQRMIEDETVQFDMDIQSVFAGGEWTPEAMSLLEK YGILVDSLDMVEVNGSSYSGDGYETLTIERKKLTVERLLRNKCQELDEVCRENNWILP RYKVMPSLTDGMYVANVDIACLEFSQMTFGDPKTNPRDARESAAANLLAELLKKADAN REHT</aaseq>

Gene Sequence

<dnaseqindica>64..213#1085..1463#3275..3409#3497..3576#3760..3820#3903..3988#4095..4164#4519..4691#4759..4831#5237..5394#cgacggcggcggcggcggtttggtttccctcttgtttgtattttaatccgtcgtgggtgggtgatggaggtggagcgtcgtggtggtggggaggtgaacggggtggtggagatggaggacgcggtggggatactggtggactacctggtgcggccggcgctgcggaaggggagcaggatgacgccggagaaccaggccgacgtcgcgcgccaggtgagcctgcgatgcgagaatggatggactttggtggtggggtttcgggtcccggggtctatgggaggtttgggggggtttcgggtggtggtcgccgtcggcgacgcgatcagggcgtgtggcgcgggtttgttagcttgtttttgtgggggcgccgcgccgcgggctgcgacggcgcggcgcggcgtgcggagcgagcgccatggcttgggccgcgacgcgccagcgggatggtgtggcggcggcgcgccgtgagcgtgtgatggttggcatgggcttccgagttccgacaagcccgagagtagcggagaaggcggctgcgggcgtaggtgccaacgaatagacggaggcggatttcaaaagagggaagacgtaaactaactgggacgttccagatcgggaaggctttccctcttctggcaattgtgttttttttttccattccgaggagggattgggatttttcaaatttcaagaggaaagggaattcagatgtttccattaaacctctaggaaatctcgggagttctaatatatggaaattttttggtttttttttgtggggtgggggggggtgcgctcattgattaaaaaaatttgcaggatcgtgggaggcgtgacaacatctcctatattctgtattatagttgtgtacaaagatagcattatagagtagcatgttacctaactttatctcttatattctgtaatgtagctgtgtgcaaatatggcaaaattgagtgccatgttacctgattttttatctcttacattctgtactgtatccctatgcatcatacattgcattctctttaggcaacttgtaatacacggctgaatacttcctcgttgtgccaccttgtttttgcaggttcatatggcagtcattctgtataactattaccaccggaagcagttcccacagcttgcttttgctgatgcaatgaggttcttcaaatgtgcatctcttactcttggtgacagtttgctcgcgtactccaatatggtccaccaacatgagaagagttctggaagtcctggggagggtgtgaatctctctgtgactgacaaagcagtcgtggatgcgtgtggaattgctgaagccctcgacgcaaaccaagactctccagacatggccatgtggccaatttcaaaggtcgctgtgcttcttcttgattcaactaggaaaagatgtctgctggagagtggttctgtcggtaaaaatgttcgctcccttttggagaaagagattgacacatctagcactagtgagcatggcagcaacaagccagaaggacaagatttagaaaatgaagagactggaccatatgtcctccaaaagttagcattttcagaggtggagcgtagaacaggttgttactataccattttgctctattttgttttccatgtgtggctattttcttaactaaacaaattttgccctctttttttcattatcagtgtgcttcatccgttgagacttttgcacccccagtatgttagtttcattcgatttgaactattcaattagcttcggaccatgcctatgtagcttgaaaactttggttagttgaaaattaccaaccagaaaagctattggtcccgaaacatgaatttatagcattgctgatacatcaataaataactaggaacattgtagtgtttaatttcccttgtaaatgatatgggctgatatcaaccaattctctgttcgactatattattttatctgctttatttttcatttatgaatcatataactgaaattaatgtatttcatttctgtgattttcttaatagagattaagcggtcaagcttgcgtcttcttgatgagcatttagcatactcattgactaaaaaagggacaactacaaagctgttcatcttacagtacgagcaaactgcaaaaggcaacttcgcggaaatgcctattgaagaattgatcaagaggtttgctgtttacacacttgcgaatttgctctctgatcaacaatggttttatttattaaacaaaatctgctcactgtgtattactgtattgatgtaaatttatatcctttatagtccatagtttgtttagaaacatttctattgtattgaatgctgtgcttgctaggtgctaaagctcttctttttattctcgtttgagcttttgactaaacttcattacatgcatgcttgatgttcttttgttattattatactaatcatgaaaatattggctaattgtacttcctaaggccgagttcatttgtgtgagttcccaactcactcccctcgttttccacacgcacgcatttcaaactgctaaatagtgtgttttttgcgcccccccccccaaagaaaatctaaacgaaagttgctttaaaaaatctattgatcactcactcgctattccatgcggggaggtggagttcccaactccaccttccgaatacagcctaatttatgtagctgtctttcaattgctggtagcttctactgttctcagtataacagtttctaacgttttcatttttttttcctatttcatttcctgtttaacaggatgattggtcctgtagttgaaaaacatccataccctacaacaacagttgttgctgagagctatcacatactcccatataaggatattctgtttgactgcctgcacaggtaacatatggttttgtttcagctatttatgcatgaaagaggtatgttgcaggtaatgtaaaatgaaaggagtataggaaattactacttggcctaattatggttaaaataatgcttcttgtttcaggaaatggcattttgattcttcgctgagcatgccaaaggaagaaacacgtcgaaatggaaagtcttcatcgcattctgaaatagatgaaaattcaaaagagcaagaatataatataaaagggtcaactcaaaagaaaattaaacgagatataaaagtacttggcagtagtgacaagaactacagctgtaccagtagaaacaaaagaagcagtaacgtgaacagcaaaagaaaatctgaagtcttcagggccacagctgctgacggtgcagagggtcttgacagtgagatacccagagttaaaaatgcactgcctcctgttgtagatgtgtcaactatgaagttcgtgagctgttcagttaatgtaaaagaaacagcagcagcaaatgcaggatttgtggatatggaagcaggtgagttctatcaatctaccataatttgatttctgttgacccgtcattgtttctcctccatgttttgatagaatcaattgactttaggtgttaaaatgaacagcaacaaaagaagagagaatcactctctagacttaaatatttctcatgatatggctatggagaaggtaagataaattcttgacgatgttgacatatcagaattctggaaagcagaaggatcacatgcaccttctgaacaaagacatactgtattgttgatttttttttttagtttgatgattatagtatgtaagtttgtatgtgtttcatttacccttctcaagttgaagaagtaattattgtatcaggcacttgtaataaagaatactgagttggaatggagaagtgcagaagtgtcaaaaaagtcaggttgatgtaaccttatccaagccagcttatttatcctattattatttataatttccctaattttttaatgtatgcactgcagattttcatcaaggtggcggtgctaaggacaacaaggatctgaagtttgcttccttcaagtcatatctgaaaaaacgggatgatcttgtatgttgtgtcggatctttcattcgaaaccttattgttcttggtgcatcaaattgtccttttactcaacctgatatgaactcaactggctatttttatgtttcagcatcgcaagcaacgcatgattgaagatgaaactgttcaatttgatatggacatccagtcagtctttgctggtattctatctttcttgaatctaaacatggctaaacttcgcaaccacgatttgtagttatatgattgtgaaaaacatcatatctgtccacaaggaaacaggcatacagatgtggtaagaatagttggatacttccccattccatgtggatcatataccacacggttgggcagggattccatcccacacatccaaacacaaacatgcctatgttatttattgtcttgtagacaactagtaattgccaagttctgagtttttatatttatgtcaatggttatctactctcatcattttctcttaaatcctaccagctccaaatttttcagtattcattatgtttaaacatattcaggaggggagtggacaccagaagcgatgtcactactagaaaaatatggaattcttgtcgatagcttagatatggtggaagttaatggttcatcctattctggagatggatatgaaaccttaaccattgagaggaagaaattgacagtggaaagactcctccgcaataaatgccaggtactcactcactcactctctatcatgttttcctcctatccctgcctttgacatttagttgatgcaggagttggatgaggtctgccgtgagaataattggattcttccgagatataaagttatgccatcactaacagatggtatgtggaaatattacttatctcttatattccccgcctggtcaacaggccaagtatgggtccttgcacctcataggcataagaattaacattgccatgctaataggtcttttaccacacagagtttgattgccattttaacgatttcaacccaaaaactgaactttttccttgcatttgttacgatattgcacattctgttgatgtcgtgatccgtattgtagatcagttattagccttgcaatcacttggtaataattttctagtctccagttagcgatgatcagaaatggctgtttgcccaactgtcaacctctctctccctccctatctttattgttcttaagccgttgcattgcacatcatgtcaagcacttcttttacaaggttttcctatcttgtcaggcatgtacgtggccaatgtagatattgcatgcctggagttcagccaaatgacatttggcgatccaaagacgaaccctcgtgatgcacgggagtctgcagctgccaacctgctggctgagcttcttaagaaggccgatgccaacagggagcacacctgacgcaagattactgaagtaaacacctgaaaattggtagacggcaggtagctgcaaagctgcaactcagcactgaactttctgaaagacatcaccttcatttagacattttaccttacattggttactcttgtcattcaaactgtagctgttgcttttttaataattcttcggtcgcaaattatgtgacgctgcaggtgcagtgtgaattttgtagtcattttaaacaatagatcttggtgaacatgtctgtttctgcctc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0514500, RefSeq:Os09g0514500