Os05g0490500

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Revision as of 10:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0490500| Description = Conserved hypothetical protein| Version = NM_001062436.1 GI:115464602 GeneID:4339166| Length = 2751 bp| Definition ...")
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Gene Name

Os05g0490500

Description

Conserved hypothetical protein

Version

NM_001062436.1 GI:115464602 GeneID:4339166

Length

2751 bp

Definition

Oryza sativa Japonica Group Os05g0490500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24154551..24157301

Sequence Coding Region

24154747..24154860,24154978..24155214,24155600..24155799,24156438..24156537

Expression

GEO Profiles:Os05g0490500

Genome Context

<gbrowseImage1> name=NC_008398:24154551..24157301 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24154551..24157301 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggcagcagagtatgattggccaggttgctgcattgtaccctgtgaaggtattccatgatctgccgcatgggcgaaacctcaattccaatactaatggagcacataggtctctttcggaagaaaatggaacacttccagaagagaatggaacacatctactcaatgttatcaaactaccacaaatacatgctttgacatttttgggttggcaaattggtaagcaaagaagaaaacaaaatgatatatgtgagaaggatcttcagcggtccgcagctgttctgggatatgcagcgcatgcaattttgctcatagcctcctatcttcatgttcccctccgataccctttgcactttggaggatcgcgatcttatgtgagtgattgtttgccttcagctgaaacagcatccattgcttcagcagagcgtacatgtatcaacatgaccgacccaaaactgacagtttacccccttttcgtggaatgtcaagaagatgaccccactaaggcatcctatgcaatctacttgttgcacaaggatacagagcagcttttgaactacattggagctgagagctctggaaggcgcgtatttgataatctgcaagagcttattaggatcatacaatcggatgagtatgtatacagttga</cdnaseq>

Protein Sequence

<aaseq>MRQQSMIGQVAALYPVKVFHDLPHGRNLNSNTNGAHRSLSEENG TLPEENGTHLLNVIKLPQIHALTFLGWQIGKQRRKQNDICEKDLQRSAAVLGYAAHAI LLIASYLHVPLRYPLHFGGSRSYVSDCLPSAETASIASAERTCINMTDPKLTVYPLFV ECQEDDPTKASYAIYLLHKDTEQLLNYIGAESSGRRVFDNLQELIRIIQSDEYVYS</aaseq>

Gene Sequence

<dnaseqindica>2442..2555#2088..2324#1503..1702#765..864#gcgccgcgccacgtcatcaccccacccaccccgctctcctctttgcttccgctcccccgcaacgcatcccgcttcacgcagattcgattcgattccatttcgataccattccatggccgccgccgccgccgccgcgggtggcccgcggccgcgatgagccccgacgcggccggggcgggcccaccgtcgtcggagctcgcccgcgtcggcagcctcggggggaggctcgtggccgccgacgaggcccgcgcgtgcctcgcccgccgcctccacgccgcgctccaggtgcgccgtgcgcgcgttgcgtgcccgcgcccgattgctttgctagggcggcgtgtggattggcgtgagtggggggctgatcggtcggccatttgattcggtgtgtgtgcaggtgagggaggagtcgcggcggcagggcgcggcgctggacgagatgcgggcgcgggtggagctccggcgggcgcgggtgggggagttgctggtcgccaggagggacgcggcccggggcgtcgaccgccgcagggagcagctccaggcgcagatcgaccgcgtgctgcgcctctccggcgccgtcgccgccgcgagccggcggctgcaggtaatcgacacaaatgccgcgtgcattgagaattgagagtacctatgtgtgttcctgttcctgcgtttacagggagatttttcgatgttgattgcaggatgcgaaagaagcgttgtctggagagaaggcgcggcttggggatttgcagaggctgttaaggatgaggcagcagagtatgattggccaggttgctgcattgtaccctgtgaaggtattccatgatctgccgcatgggcgaaacctcaattccaatactaatggtgagaatccaataatctcatgtcttgaacaatgacactccaaggatatgcatggttctaatacatatgtatgtttattctgatgagaagtatggagctttaaacattgctaaccagcagagtgatgccttaggtttatgctctaggaatatatcataggttggtttgccatgcccttttattcaatggcttcttttccggtagattggtaaagactacaagagaccaagatatcttctggatgttgtatctattgttattttccaggtgtgtttatatacatgtgtgttcactgaatcactccttgagttaatgttgaatctacccatctctgtacttattgctctgccctcatcgttatggcgtgcatcgtctatgtctaagttggcgaaggtgttccacatgctattctgtttggagatattgttgtctgcaaacaaggagagtttggagtgtactgcttaaaaatgtttaaacataggcatactacattgcattattgcatacagcatatcagtgacataagaattacaccggttaacctgtcagatagtgcacatttttctaccgaggattgatgaacagtggcagaaaatttctttcctaattcgttctgttaaactacaaaacactttcaggagcacataggtctctttcggaagaaaatggaacacttccagaagagaatggaacacatctactcaatgttatcaaactaccacaaatacatgctttgacatttttgggttggcaaattggtaagcaaagaagaaaacaaaatgatatatgtgagaaggatcttcagcggtccgcagctgttctgggatatgcagcgcatgtaagtcttcacagcactcctgtcctgtactataaaacatcaatgtcagttacttgatgtagcattgcccttaaaaagattacttgatagcatggatgctccaacctagctatgctcattttcatgctcaaattaggcaattaacacaattaacattgtagatggccttaagatacatccttctattctttttgaaacacaaaattaataagccaatgcatgcttttcaaaatttgtggtcattacagtgttgaacatttgtaaggaaggaatgatggcagatgttcaaattcatcttcctgcatgcacatactggatcactgcttgtttttttctcaagggttatagagttaccagttgccaatttttttatatttttttgtaggcaattttgctcatagcctcctatcttcatgttcccctccgataccctttgcactttggaggatcgcgatcttatgtgagtgattgtttgccttcagctgaaacagcatccattgcttcagcagagcgtacatgtatcaacatgaccgacccaaaactgacagtttacccccttttcgtggaatgtcaagaagatgaccccactaaggcatcctatgcaatctacttgttgcacaaggtatgttttcccccttaatgttttattctggctgcttatttgttgtaatgtttgtttaatctattttccccataaactaagatcgttattatgatcatttccttgctgggtggttaggatacagagcagcttttgaactacattggagctgagagctctggaaggcgcgtatttgataatctgcaagagcttattaggatcatacaatcggatgagtatgtatacagttgatctattctgcggtaactgtattcttggagtctttgcgatgtagagatggtgttcatacacatgtaaaaatagggtttctttgtgttcttttattgtgattcttgccttctttcggtgtgccgagtttttgtatgcacaggaaagaggtgcattgggtgtttttttgctagatgaaaatgaatgaaatgatatttac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0490500, RefSeq:Os05g0490500