Os09g0516300
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os09g0516300 |
|---|---|
| Description |
RNA-binding region RNP-1 (RNA recognition motif) domain containing protein |
| Version |
NM_001070206.1 GI:115480154 GeneID:4347579 |
| Length |
4802 bp |
| Definition |
Oryza sativa Japonica Group Os09g0516300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:20763410..20768211 |
| Sequence Coding Region |
20764135..20764350,20764490..20765576,20765664..20766415,20766516..20766563,20766667..20766909 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:20763410..20768211 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:20763410..20768211 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcgtcggagccgccgccgccgcagccgcagccgcaggaggcggcgggccgggaggcgtcgtcctccctctcccccgcgaaggaatctgccgccggtggaggcggggtcggggggtcgggggcaccggagacgaacacgctgtgggtgggcaacctgcccgcgcaggcggcggaggacgacgtgatggcgtccttctccccgcacggcgcgctcgactgcgtcatggcccgcgcgggcccgcggagctacgcgttcgtgctgttccgctccgtcccggaggcccgcgccgccctcgacgcgctccagggctccaaggtcaagggcagcgtcgtccggctcgagttcgcccggccggctagagctgttaagaacttatgggttggtggcattagctcctcaatttcaaaggaggagctggaggaggagtttaagaaatttggaaaggttgatggtattgcattctctcgtgatcagacttccgcgtacattgattttgacaagctggaagatgcaatttcggcacatagagccttgaatggaagagttttaggtggacaagaactgtgtgttgatttccaaaggtccaggggcagagcggaatggttggagacaggcagcttcaatggtagaactggacctgcaaagggttatggagtacgaaatcgagaatccaatcccaccaatgttctttgggtaggtttccctaatacagctaaaatcaatgaggaggcacttcggcaagcgatggctgtacatggtgctgttacaaatacaaaagttttcccaacaaggcaatatgcttttgtggagtttgcaacagttggggaagcttctaatgctaagaaaaatctagatggtcgtcttttcaatgatcagagaattcaaattcttttctcgaacagtgagcttgcgccaaataaattagataatccaacagcagtttctggatttccaaaatcagagatgtattatgatgatggtcagtatggcgcttctgattattttgatcctcgacggggaagatcaagatactttgagtacagtggtgtccctgtttctggtggtattcttccatcaccggaatctggaaatcctctcttaactggacgatctgctcagagtacattcgatccaagagaagccaagaggttgcggttggatgctgcagctgacccttatgatacaagggcaggtagtgagggtctttattctgctgggtactctcagcgcgagagtgcacgttctgagaggagctcaagtcctgctattcgaatccatggcacagtgcaccgaacatcataccttgagcacttctggcgtggtagcattgccaaaggtggatctcctgtatgtcgtgctcgctgtttgcctataaggaagggtgttgagatacctttaccggatgttgttaattgttccgctagaactggactagatatgctggcaaagcattatagagacgcttcagggtttgatatcgtcttcttcttgccagatagtgaagatgactttgtttcttacactgaatttttgcgctacttaggctcaaaaagtcgggcaggggttgtaaaggttgatggggggactactttatttttggtcccaccttccgattttttacgaaatgttttgcaagttgatggtccagaacgtctttacggtgtagtattacacattccgcaaatgtctgctgctgctcctgcttctgctcccactcctgctgtacaaaggccacaactaactgcaccagaatcacaaccttactacgatgaaagggaaattcctttgcagagaaggtatagtatgattacgcctagcaacaatcaccatcgagatgctgatcaccgtggatctttacgtgaggattcattgcatcaattggggcaaattcttgcacgacctcgggtggatgaaggacaagtagttcagccaaaccttgccggtatccctacaaacgcaggactacaggtacagccttcactccagcctgatatgatagccactttagctaaacttttgccaagtgggcagtcatcagctctggtcactggccagcttcccctgagctcaacagaccaacctgcattaacccaaatgaatgatgcatctactcttgcaaaagtatggagacctgaaaatcaagcaatggcttctacttcatccttagagcagatcggtaatttccagcattcaggacaacagttcagcaaacaagctggagcagttcatctgccaaactatgggaacttggcaggtgcacaggagcacccaacacaacatagtgcttacaatcctgaaatgactctaaacttgccaccaccaccaccacctcctacgctgccacccagttctgctatattatcatcgcaagttggacacagtttgcctacgcagatgagtcagcaacagtatcaaccagagcagtattatatgactcaaagcaattatggtcaattggccacagttagcagttctaatcttcaggcgcaccatcaacaaattgttgcgactcctgctgcacaagctcctgttgctgcgcaattccctcctgctatgcaagctcctgctgccgcacaagctcctgttgctgcacaagcttctgctgacgaggcagaacggaacaggaagtatcaggcgactcttcagttggctcagcgcctgttgggtcagctacaacagaagcctggaaatcaaccttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MSSEPPPPQPQPQEAAGREASSSLSPAKESAAGGGGVGGSGAPE TNTLWVGNLPAQAAEDDVMASFSPHGALDCVMARAGPRSYAFVLFRSVPEARAALDAL QGSKVKGSVVRLEFARPARAVKNLWVGGISSSISKEELEEEFKKFGKVDGIAFSRDQT SAYIDFDKLEDAISAHRALNGRVLGGQELCVDFQRSRGRAEWLETGSFNGRTGPAKGY GVRNRESNPTNVLWVGFPNTAKINEEALRQAMAVHGAVTNTKVFPTRQYAFVEFATVG EASNAKKNLDGRLFNDQRIQILFSNSELAPNKLDNPTAVSGFPKSEMYYDDGQYGASD YFDPRRGRSRYFEYSGVPVSGGILPSPESGNPLLTGRSAQSTFDPREAKRLRLDAAAD PYDTRAGSEGLYSAGYSQRESARSERSSSPAIRIHGTVHRTSYLEHFWRGSIAKGGSP VCRARCLPIRKGVEIPLPDVVNCSARTGLDMLAKHYRDASGFDIVFFLPDSEDDFVSY TEFLRYLGSKSRAGVVKVDGGTTLFLVPPSDFLRNVLQVDGPERLYGVVLHIPQMSAA APASAPTPAVQRPQLTAPESQPYYDEREIPLQRRYSMITPSNNHHRDADHRGSLREDS LHQLGQILARPRVDEGQVVQPNLAGIPTNAGLQVQPSLQPDMIATLAKLLPSGQSSAL VTGQLPLSSTDQPALTQMNDASTLAKVWRPENQAMASTSSLEQIGNFQHSGQQFSKQA GAVHLPNYGNLAGAQEHPTQHSAYNPEMTLNLPPPPPPPTLPPSSAILSSQVGHSLPT QMSQQQYQPEQYYMTQSNYGQLATVSSSNLQAHHQQIVATPAAQAPVAAQFPPAMQAP AAAQAPVAAQASADEAERNRKYQATLQLAQRLLGQLQQKPGNQP</aaseq> |
| Gene Sequence |
<dnaseqindica>3862..4077#2636..3722#1797..2548#1649..1696#1303..1545#113..469#accccacctcatcgcctcagaattcagaaacgaaagccaaaaaaaaaaaaaaaaaaaaatccccatctgctttagggtttccgtcgatctctctccctcgcgcgcgccgccgatgtcgtcggagccgccgccgccgcagccgcagccgcaggaggcggcgggccgggaggcgtcgtcctccctctcccccgcgaaggaatctgccgccggtggaggcggggtcggggggtcgggggcaccggagacgaacacgctgtgggtgggcaacctgcccgcgcaggcggcggaggacgacgtgatggcgtccttctccccgcacggcgcgctcgactgcgtcatggcccgcgcgggcccgcggagctacgcgttcgtgctgttccgctccgtcccggaggcccgcgccgccctcgacgcgctccagggctccaaggtcaagggcagcgtcgtccggctcgagttcgcccggccggtgagatgccttctcttcttacaccttgcctggatctactgtctccttcgatttccccccatgaggtgaggctggtgcctcggtgatgtgatttttgtggcggtaactagggtttcgatgagtgtgttttgtagcagcctcgcataggaggaaacgattttgtgtttttatctggtgccctcacggattgtggtgaggctggtgcctcggtgatgtgatttttgccgcggtaactagggttttgatgtgtgtgctttctatcctcgcataagaggaaacgattttatggcgctgctgattagctagatttaggtggtgtcgaacttgggcttatgatacacagatttgttttgtggttgcaaagttaaataaatgctgtttactgatccttagttgtttttgtgggaaacgattttgtggcatacatgctgctgccatgctgtgcaattagagatatatgcacgaaaccggctgcaatcttactttgatgttatctttaccctagctttatgtgattcagcatctactccgtgttatatggaagagatcattgtctactgaattgggacggttgcttgtttcatgactagtgacatgcttatacgggaaattgtttcagatgtcttgagttccctatgttttaacatgctataatctacagtgtcttgactgtattctgtgttttgattttagtaaacacaggcattacttttgctctcttgacagtttttattcctagttctatttagacgaggattttgcgtttcccatttctttgctgaaatacgtgccatgccttctgataaaccatgttccttgatttatcttttcaggctagagctgttaagaacttatgggttggtggcattagctcctcaatttcaaaggaggagctggaggaggagtttaagaaatttggaaaggttgatggtattgcattctctcgtgatcagacttccgcgtacattgattttgacaagctggaagatgcaatttcggcacatagagccttgaatggaagagttttaggtggacaagaactgtgtgttgatttccaaaggtccaggggcagagcggtgtgtatccattaattatatgtattgatatactgtttgcattttcttggtaacaagcttatgaatgttcttgttgcatgtaatatttctgaattttttttaggaatggttggagacaggcagcttcaatggtagaactggacctgcaaaggtattttctgtttgcatttcctttcttgtattactggttgtttttctgttatatctgctgatgttgctaactatcgtttcatattctgttggcatgtcagggttatggagtacgaaatcgagaatccaatcccaccaatgttctttgggtaggtttccctaatacagctaaaatcaatgaggaggcacttcggcaagcgatggctgtacatggtgctgttacaaatacaaaagttttcccaacaaggcaatatgcttttgtggagtttgcaacagttggggaagcttctaatgctaagaaaaatctagatggtcgtcttttcaatgatcagagaattcaaattcttttctcgaacagtgagcttgcgccaaataaattagataatccaacagcagtttctggatttccaaaatcagagatgtattatgatgatggtcagtatggcgcttctgattattttgatcctcgacggggaagatcaagatactttgagtacagtggtgtccctgtttctggtggtattcttccatcaccggaatctggaaatcctctcttaactggacgatctgctcagagtacattcgatccaagagaagccaagaggttgcggttggatgctgcagctgacccttatgatacaagggcaggtagtgagggtctttattctgctgggtactctcagcgcgagagtgcacgttctgagaggagctcaagtcctgctattcgaatccatggcacagtgcaccgaacatcataccttgagcacttctggcgtggtagcattgccaaaggtggatctcctgtatgtcgtgctcgctgtttgcctataaggaagggtgttgagatacctttgtatgtatacactcaccatcttaatcttgttctctacagttgatttctatagcctctggatcttacacatattccactgttttgcagaccggatgttgttaattgttccgctagaactggactagatatgctggcaaagcattatagagacgcttcagggtttgatatcgtcttcttcttgccagatagtgaagatgactttgtttcttacactgaatttttgcgctacttaggctcaaaaagtcgggcaggggttgtaaaggttgatggggggactactttatttttggtcccaccttccgattttttacgaaatgttttgcaagttgatggtccagaacgtctttacggtgtagtattacacattccgcaaatgtctgctgctgctcctgcttctgctcccactcctgctgtacaaaggccacaactaactgcaccagaatcacaaccttactacgatgaaagggaaattcctttgcagagaaggtatagtatgattacgcctagcaacaatcaccatcgagatgctgatcaccgtggatctttacgtgaggattcattgcatcaattggggcaaattcttgcacgacctcgggtggatgaaggacaagtagttcagccaaaccttgccggtatccctacaaacgcaggactacaggtacagccttcactccagcctgatatgatagccactttagctaaacttttgccaagtgggcagtcatcagctctggtcactggccagcttcccctgagctcaacagaccaacctgcattaacccaaatgaatgatgcatctactcttgcaaaagtatggagacctgaaaatcaagcaatggcttctacttcatccttagagcagatcggtaatttccagcattcaggacaacagttcagcaaacaagctggagcagttcatctgccaaactatgggaacttggcaggtgcacaggagcacccaacacaacatagtgcttacaatcctgaaatgactctaaacttgccaccaccaccaccacctcctacgctgccacccagttctgctatattatcatcgcaagttggacacagtttgcctacgcagatgagtcagcaacagtatcaaccagagcagtattatatgactcaaagcaattatggtcaattggccacagttagcagttctaatcttcaggtcagcaattctaacatcccatttcttccttattcccaagtaaaccttgccaacaaataatcagatagggtttttggcagtgtttcagcatgctttgactttgcctaatgatagggtaaactatggtttctctttacaggcgcaccatcaacaaattgttgcgactcctgctgcacaagctcctgttgctgcgcaattccctcctgctatgcaagctcctgctgccgcacaagctcctgttgctgcacaagcttctgctgacgaggcagaacggaacaggaagtatcaggcgactcttcagttggctcagcgcctgttgggtcagctacaacagaagcctggaaatcaaccttaaggctatcctggaaatcaaccttcaggctaagttacttattcaggtacgttttatgtgctgctctgcaattgttctttccgtgccatttacaacttctctgctatgaaattaggtatcaagtgaaatatccaaacagattcaggcattcagctaatcgtaggtgtagtatatgcacttcttaaaagttaaaaccagaaactctgctaacaagttttgtaggctttatttctgctagggcatagtccaatttaggcgaacaagggagatatgatagtttgcatcatacttgttcccttgtattttgttcaagcatatcttaacaaagttgaggtttttttccttagaaaaacaaatatatatatatgacaaactattaagatgacttttaaacttggaatttaaactattaaggttagcttatgcatatcacggattataattgtggctggttacagttttagatctttttagtgagacacgtttaccattttctgtgcatttgctattgatagtatttaatttatagttgtgtgatatgttatctgcatattcttgtgttattctagtatatacaatgcttaggttgttctacgagtgtgcataccatacacaagcattcaagttatttgatttgataaatgtatgaacttctttcatgtaataagctttgtggtaatctaaagtagcgaaccttatctgaaatgaacccaaaatcacattttgcc</dnaseqindica> |
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