Os09g0518700

From RiceWiki
Revision as of 21:02, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0518700

Description

Inositol 1, 3, 4-trisphosphate 56-kinase family protein

Version

NM_001070224.1 GI:115480190 GeneID:4347597

Length

4875 bp

Definition

Oryza sativa Japonica Group Os09g0518700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20897296..20902170

Sequence Coding Region

20897650..20897796,20897957..20898104,20898220..20898356,20898641..20898703,20898883..20898996
,20899453..20899606,20899869..20900071,20900151..20900222,20900314..20900402
,20900502..20900697,20901312..20901347,20901884..20902168

Expression

GEO Profiles:Os09g0518700

Genome Context

<gbrowseImage1> name=NC_008402:20897296..20902170 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20897296..20902170 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccaagcatgcgagtcaccactgacacctggccccgccgcgccgcccaagaacctctccttcttctcctcctccggtcctccctgatgaaaagcgcgtcactgcaagcactgaacccaaaccgagccatggcggccatggggcgatctgtgcgggtggtgctggactcctccgtcctcctcgacccatccggtgttacagcggaggaggaggaggtggtggtggcgctgcggcctggggcggaggcgctgctgcggcgcctgcgatactccaatctccgggtggcaatttgccatccggagggcttgccaactaatgagtcaggttttcttgagaagactgcaaaattgtactcctttggatatatgccacttacatctccaagtgggagcaatttactaaatgagttgatgttagaatggagtggaacgaatttttgcttctatgtgacttcaggagttcatgaaggtctactatctgaacttcagaatcacaactgggaagttattgccatgggtaatgaagatgtcataaagaactctggagttatacatattagcatgcttcaagagttacttatcactttggcaacttcaataaaaaaggaaataggaaactcatctgctttcgtggttggctatgttatgaaacaatcccgtgaggaagactttgccaagagaggagcattccccatttatcctagtaaaaacgatcttatctttgttccactctcttttgaacttcccttagcttctcaattgcaagaagttgatctagtgctacacaaaataactgatgagatcatcaacattgatccaaactcttccatcagttttccgaaggggatttcattttctccgggaatgtctgaaattataaggtttgtagaagagcactgtgatttttgtgtaattgatccattcaaaaatatttatccattgctggatcgcatccaaattcaagaaattctaatccgactggaaggacttagcgccgaaggaaggccaaaactccgagcaccatgctttttaaagattgaaagcttttgtggcagtgaattacagaaacaactagcagaagctaagttatcctttccgctcattgtgaagccacaagtagcatgtggagttgctgatgcccacaatatggcattgattttcaaaatcgaagaatttagcaaccttagtgtgcctcttccagctattctacaggaatatattgaccatggatccaaaatattcaaattttatgcaattggagacaagatttttcatgctattaagaactcaatgcccaatgcaagtcatcttaaatcatcatcaggaggcaaacctcttacattcaacagtttgaagactcttccagtggctacaaaggagcagctgctgcaaaacgaggtgcaagatagcaaattgttggacattaatctagtagaagaggctgcaaaattgctgaaggaattgctagggcttacaatatttgggtttgatgtcgttgttcaagagtccagtggagaccatgtcatagtggacctaaactatcttccgtctttcaaagaagttcctgacaatgtggcgatgcctgcattctgggatgcaatcaagcagtcatatgagtcaaggaagcagatgacacaaacttag</cdnaseq>

Protein Sequence

<aaseq>MPSMRVTTDTWPRRAAQEPLLLLLLRSSLMKSASLQALNPNRAM AAMGRSVRVVLDSSVLLDPSGVTAEEEEVVVALRPGAEALLRRLRYSNLRVAICHPEG LPTNESGFLEKTAKLYSFGYMPLTSPSGSNLLNELMLEWSGTNFCFYVTSGVHEGLLS ELQNHNWEVIAMGNEDVIKNSGVIHISMLQELLITLATSIKKEIGNSSAFVVGYVMKQ SREEDFAKRGAFPIYPSKNDLIFVPLSFELPLASQLQEVDLVLHKITDEIINIDPNSS ISFPKGISFSPGMSEIIRFVEEHCDFCVIDPFKNIYPLLDRIQIQEILIRLEGLSAEG RPKLRAPCFLKIESFCGSELQKQLAEAKLSFPLIVKPQVACGVADAHNMALIFKIEEF SNLSVPLPAILQEYIDHGSKIFKFYAIGDKIFHAIKNSMPNASHLKSSSGGKPLTFNS LKTLPVATKEQLLQNEVQDSKLLDINLVEEAAKLLKELLGLTIFGFDVVVQESSGDHV IVDLNYLPSFKEVPDNVAMPAFWDAIKQSYESRKQMTQT</aaseq>

Gene Sequence

<dnaseqindica>4375..4521#4067..4214#3815..3951#3468..3530#3175..3288#2565..2718#2100..2302#1949..2020#1769..1857#1474..1669#824..859#3..287#agatgccaagcatgcgagtcaccactgacacctggccccgccgcgccgcccaagaacctctccttcttctcctcctccggtcctccctgatgaaaagcgcgtcactgcaagcactgaacccaaaccgagccatggcggccatggggcgatctgtgcgggtggtgctggactcctccgtcctcctcgacccatccggtgttacagcggaggaggaggaggtggtggtggcgctgcggcctggggcggaggcgctgctgcggcgcctgcgatactccaatctccgggtggtatgaagcgggttcttcacccctctcgatctctcccctgcgatttgcgattagtactagtgggatgtgggcagggtgttggttactggtgattttaggatgggattgctgcaaccttaggtttttgctgagatgatctgaacatctgtttcgggctgaatgtgaatgatctcgaaaaaaattggctaaagactcaaatctttttacattttgtttcagtgtttacacatgcttttgtgtttgtttagcttcatgaagtttttccctatggagattatttaggaggagggcatgttttggctgatcagatgtgttagctcttggctcagtagaatccatggccaattgcatgccactaactttatgattaacgcatattccccccccccccaaaaaaaaaaaaactatatgattaacgcgaacacatctcattgagatttttatgatgtctccttgtagattttatcaagttctttttttgaatgaaccggcacaaaatgattcacagctaattgtatcatccttctctttttcaggcaatttgccatccggagggcttgccaactaatgaggtgctctgtttacatcctttctgaacttattttgcttgcttcgtcaataattttactactttgacaggctagcttgatgaaatgaaattatgtaagagaaaatggtcaatgtttgtacggctacaatattgtgttctactgccatttttcttatcagatttacctttaaaacaatcttgttaaacttgtggttacacgcaaatactttcgtaatatatttcttaaaggcactaggacagtaagagtggtcttgttgtctccaacatctgtcctaataataccaaaggtgcaatttcataagattgaattgaattttattttaaagtaaccagatagaattgaacttttaaatgctctagtggcaccatctcttaatcttcagaaatgtagcgttcttctggaatctgcctttaaacagttaaaatatttgcattccgtgaattcaaaacaattgttaactattgtggtgcttatctctgtgtccttcccctgacataaaaacctctatggaaatattgcctttagacagttaatgtttttttttctgatataaagtgactgcagttgaagaaaaatagtttgtgcttacacaccccctctttgctttttattagtcaggttttcttgagaagactgcaaaattgtactcctttggatatatgccacttacatctccaagtgggagcaatttactaaatgagttgatgttagaatggagtggaacgaatttttgcttctatgtgacttcaggagttcatgaaggtctactatctgaacttcagaatcacaactgggaagttattgccatgggtaagcattaacaataccgtactcatgttcttaggagttcattcatcgaataatgtccctatatatatgttgtgggccacttactctctctatattcaggtaatgaagatgtcataaagaactctggagttatacatattagcatgcttcaagagttacttatcactttggcaacttcaataaaaaaggttaacttttcttggcatcaacttatgcattttagtggtataatgcatttaattttaattatatactagcgtttgttccatttttattcaggaaataggaaactcatctgctttcgtggttggctatgttatgaaacaatcccgtgaggaagactttgccaaggcaatttttgtacactctgttactgactactatgtactggacctcttctcaaatatcattttcttcaccttgcttgcagagaggagcattccccatttatcctagtaaaaacgatcttatctttgttccactctcttttgaacttcccttagcttctcaattgcaagaagttgatctagtgctacacaaaataactgatgagatcatcaacattgatccaaactcttccatcagttttccgaaggggatttcattttctccgggaatgtctgaaattataaggtacataagaagatcgaactgagagttactggacataatgtaacaagaaatgtatttaccttttaataacttgtgatggaagtttgctatggtctttatatgcagtggctattgaagctataaatgacaaccaaatgtagtagtgtttcctttttagcatggtctatttggcaatggcttgatatttgttttgctttcaaaaactataaagctcttctgcagttccttatttagtctcactacaactctctatgttaagcaggtttgtagaagagcactgtgatttttgtgtaattgatccattcaaaaatatttatccattgctggatcgcatccaaattcaagaaattctaatccgactggaaggacttagcgccgaaggaaggccaaaactccgagcaccatgctttttaaaggtctatttaactgaacttacattcatgcagaacaatggatacattataatgtcataaagaagaaaatttggagatgcatatatctgttcccttgctgttacttgaaactgtctatttgccagttaccatctttttcttccatctatatatgttccacaattgctcatttagcaatctgtactgttgatttcgaatttatatgtcctagatgattgaccacttgtgtgatggcaaattgtgttcccttagtgacctgttgtatgcttggtcctattttgtcatttctcctctgttctgtttcttaattgttgtcctatatgtttttgatattttccacccctcggtgctcttgtggtgtggtcttgatacttctgaatagcattagtgtcctttgtgatttgtcaaagtttaactttgctagttttctttgcttgactagctatttttgtgaaacagattgaaagcttttgtggcagtgaattacagaaacaactagcagaagctaagttatcctttccgctcattgtgaagccacaagtagcatgtggagttgctgatgcccacaatatggtaactctttggctacatttatttatatgtacctatacattagttttctatcatatatcctgtagtcaccaacatcaggaagatgcttcatattctaactgtgccatcattatcaatttttagttaagattttttattgttttacttttgcacctgaattgcacatttgttgtgtacaggcattgattttcaaaatcgaagaatttagcaaccttagtgtgcctcttccagctattctacaggtacgattttgtatctttcttcagatgatgattacttggaattaaatctgatatatatatcttggtaaattttatattctaaagataatcaattcttccttgagcactttgcaacaatttattgctaagttctcgcaacgattcattgcaattttaacatttctgaggcatcctatgctcaaatcgattcatttggaccttgctagtaagttactacgtatctgtcaattgcaattctgatgacctgcctgctcaaacttatgcattttattaatgttatgtaggaatatattgaccatggatccaaaatattcaaattttatgcaattggagacaagatttttcatgctattaagaactcaatgcccaatgcaagtcatcttaaatcatcatcaggaggcaaacctcttacattcaacaggtacacttgcagaagtatatacaggcaaagtatgatgcccaatttctcaatcaactgttatcaagtatcaacactgatagagtcatattttttattttaatttgggttaccacagtttgaagactcttccagtggctacaaaggagcagctgctgcaaaacgaggtgcaagatagcaaattgttggacattaatctagtagaagaggctgcaaaattgctgaaggaattgctagggcttacaatatttgggtttgatgtcgttgtaagtatttcttctagcctttgtataaccatgctttttgagtaagtacagctactcagaggaacagtagcataattcgtccagctggaatacctctgattgccttcatgcttaattgctctcgacatattcaccatgccaatgctgattgtatatgcaggttcaagagtccagtggagaccatgtcatagtggacctaaactatcttccgtctttcaaagaagttcctgacaatgtggcgatgcctgcattctgggatgcaatcaagcagtcatatgagtcaaggaagcagatgacacaaacttagttcaagttctcaagcaaatgatttgcatacaggcgacaacattcatactaattggaaagggagaccgctctttgggatcgaattaactctgacctctagcagaggttgcttgtcacttagatttgtggaactgcttgcgatgaacattgctggcagagatgtacacctagcgctaataatttggggaacaaagtcttttgtgttccctgagttaaaacccttagcagaataagcatgcagaagcaactctcccgtgttaaactaattattctgttgtgcagtgtaccatttacatgtgaattttggccactctgtaaacactctgctgaaatgagaaattgcttactgatatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0518700, RefSeq:Os09g0518700