Os09g0551500

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Revision as of 07:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0551500| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001070403.2 GI:297609922 GeneID:434778...")
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Gene Name

Os09g0551500

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001070403.2 GI:297609922 GeneID:4347788

Length

5460 bp

Definition

Oryza sativa Japonica Group Os09g0551500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22678224..22683683

Sequence Coding Region

22678224..22678529,22679284..22679400,22679481..22679674,22680532..22681872,22683173..22683457
,22683617..22683683

Expression

GEO Profiles:Os09g0551500

Genome Context

<gbrowseImage1> name=NC_008402:22678224..22683683 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22678224..22683683 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaagaccacagcttcggcggtggctggggaagacatcggctccgacgggggcagcggtggaggctttcaacaatggggccaatactggcgatatgctgatgatgatgaagtggcaaatggggaagagggccaacctcggtgccggccatcggtggagtgcacgccggtgtcggtggcggcggaaggggctgaggtcggctccggcgaggatgcggcgaagtggcggcagcggggaggagctccggcgaggacgcggggaggaggaggagcgagcgaggagaagaagcgcggtcttcgcggccgcgggtggaggaggaacgatgtcttcgcgcgtggaatcctcggcgatgtcttgagaagatttctgagcaacattggctcacaaatagcaagaaagagaccaattttcatggatccatcagatgctttcacctacgtcatcatcagcgtcgtcgtcctcctcctcctgccgccgccgtgttcatccgacgaccggcttgtccccggtaagccgctaacctctgatgccaccgtcgtctccgacggcggcgccttcgccatgggcttcttctccccctccaactccaccccggccaagctctacctcggcatatggtacaacgacatccctgtgcgcaccgtggtctgggtcgccaaccaagaaaccccggtcacaaatggcacggccctgtccctgaccgactcctccgacctcgtcgtgtccgacgccgacggccgcgtccgctggacggccaacgtcaccggtggcgccgccggcgccggcaacggcaacacgaccgcggtgctgatgaacaccggtaacctcgtcgtccggtcgccgaacggcaccgccctgtggcagagcttcgagcacccgaccgactcgttcctgcccgggatgaagctgcggatgatgtacacgacgcgcgcctccgaccggctggtgtcgtggaggggccccggcgacccgtcgccggggagcttctcgtacggcggcgacacggacacgctcctgcaggtgttcatgtggaacgggacgcggccggtgatgagggacgggccgtggacgggcgacgtggtggacggccagtaccagacgaacagcaccgccatcaactacctcgccatcctcagccgcgacgacgaggtctccatcgagttcgccgtccccgccggcgcgccgcacaccaggtacgcgctcacctacgccggcgagtaccagctccagcggtggagcgccgcctcgtcggcgtggtcggtgctccaggagtggcccaccgggtgcggccgctacggccactgcggcgccaacggctactgcgacaacacggcggcgcctgtcccgacgtgcaggtgcctcgccggcttcgagccggcggcgagcggcggttgccggcgggcggtggcggtgcggtgcggcgacggcttcttggccgtggccgggatgaagccgccggacaagttcgtgcacgtggcgaacgtggcgacgctcgaggcgtgcgccgcggagtgcagcggcaactgctcgtgcctggcgtacgcgtacgccaacctgagcagcagcaggtccaggggcgacacgacgaggtgcttggtgtggtcaggggacctgatcgacacggccaaagttggcctcgggagcggccacagcgacacgctctacctcaggattgcaggccttgatacgggcaagagaagaaataggcagaagcacagagagctaattttggatgtcatgagtacatccgatgatgttgggaaaagaaaccttgtccaggattttgaattcctatttgtaaaatttgaggacattgctctagcaactcacaacttttcagaagcatataagattggggagggaggttttggcaaagtttacaaggcaatgataggtggtaaagaagttgctgttaaaagattaagtaaagattctcagcaaggaaccgaggaattcaggaatgaagttattcttatcgcaaaattgcagcatagaaatttggcgtggaacatgtggaaggaagagaaaaccaaggatttggcggactcatcaattattggtagttgcttacttgatgaggttttgctttgcatccatgtagcactattgtgtgttcaagacaacccaaatgacaggccacttatgtcatctactgtgttcattctggagaatgggagtagttctgcacttccagccccaagtcgccccgcctactttgcatacagaagtgatgaatcggagcaatcaagagaaaatattcagaactcaatgaatacttttaccctaacaaatatagaggggcggtaa</cdnaseq>

Protein Sequence

<aaseq>MGKTTASAVAGEDIGSDGGSGGGFQQWGQYWRYADDDEVANGEE GQPRCRPSVECTPVSVAAEGAEVGSGEDAAKWRQRGGAPARTRGGGGASEEKKRGLRG RGWRRNDVFARGILGDVLRRFLSNIGSQIARKRPIFMDPSDAFTYVIISVVVLLLLPP PCSSDDRLVPGKPLTSDATVVSDGGAFAMGFFSPSNSTPAKLYLGIWYNDIPVRTVVW VANQETPVTNGTALSLTDSSDLVVSDADGRVRWTANVTGGAAGAGNGNTTAVLMNTGN LVVRSPNGTALWQSFEHPTDSFLPGMKLRMMYTTRASDRLVSWRGPGDPSPGSFSYGG DTDTLLQVFMWNGTRPVMRDGPWTGDVVDGQYQTNSTAINYLAILSRDDEVSIEFAVP AGAPHTRYALTYAGEYQLQRWSAASSAWSVLQEWPTGCGRYGHCGANGYCDNTAAPVP TCRCLAGFEPAASGGCRRAVAVRCGDGFLAVAGMKPPDKFVHVANVATLEACAAECSG NCSCLAYAYANLSSSRSRGDTTRCLVWSGDLIDTAKVGLGSGHSDTLYLRIAGLDTGK RRNRQKHRELILDVMSTSDDVGKRNLVQDFEFLFVKFEDIALATHNFSEAYKIGEGGF GKVYKAMIGGKEVAVKRLSKDSQQGTEEFRNEVILIAKLQHRNLAWNMWKEEKTKDLA DSSIIGSCLLDEVLLCIHVALLCVQDNPNDRPLMSSTVFILENGSSSALPAPSRPAYF AYRSDESEQSRENIQNSMNTFTLTNIEGR</aaseq>

Gene Sequence

<dnaseqindica>5155..5460#4284..4400#4010..4203#1812..3152#227..511#1..67#atggggaagaccacagcttcggcggtggctggggaagacatcggctccgacgggggcagcggtggaggtggaagggaacttactcgttttcagatcgtgttttcatctaccaaatgcaaccaccaatgctcaagaacgaagatcatcagacatagagatcaaaatttccacacgtatggagaagattaaggaaagaacaggatttagggacttactcgtactctaggctttcaacaatggggccaatactggcgatatgctgatgatgatgaagtggcaaatggggaagagggccaacctcggtgccggccatcggtggagtgcacgccggtgtcggtggcggcggaaggggctgaggtcggctccggcgaggatgcggcgaagtggcggcagcggggaggagctccggcgaggacgcggggaggaggaggagcgagcgaggagaagaagcgcggtcttcgcggccgcgggtggaggaggaacgatgtcttcgcgcgtggaatcctcggcggtgaaatcgtgcggtggagaaaacttgcgcgcggatggacggttcagatcaatttggatgatttgacctgtagcattggaggaggacaacttctttttatattagtatagatacatctaaagagaaataattatagggttaaaaatgaaaatgggccattggtgtgacagatcggcaggttcgtaagtggtcttgggatctagtaacttccttgcaaccccggctgagatttattctctttttttatagccaatcctatgaccaatatttatggtatgacgtggctctttcttttttcatcatgagaaagtattttcactagttaagatatgatacaacgcaactaccagtaggataaatggataatggaatagagctatttgcttggctgctagcataaccactctctctgatagcccactaagattttattaattactgattccgaagaaattgttgttgaaacccaccagccgaattttagaatttaattttcaaaggcttctccgtcaacttcgttgccctagcttgcccatgttttatttccaataattgctaagaataatcaaaattagcttcaaattttatgccaagcacacagatactgcatcccctctgtagtcaaatactggtttctgaccctgtgtgttattaatatcgtaaagtagcagcggcgaagtatttttggtcttttttttagctgtctttattgaagctttcaggataaggacgcaagttggtttgatttgaagcaatccacggcaaatttgtcgaagttttggaccaaaacagccagttagatggaaaaaatgagaggacacatcaaggtctcaaatacatacttgccaggcgaacaccgtttgctaggcggttttgtcggttatcacaattaccgccacgaaagccggtaaaacttgataaatttgccgaaatgttgattttttttacttctcgagtttctaaccggtttcacaacgcgaatcggcttgagatgaccaataaccgccacagcatgttgaatagataatccttatgttgtcaaagctaagctgatgcgtcaatgctgaatgtcgtcaaaaatactcttcggtgaccaatagccaataatcggctttagaatttttaaccgtattcgaataaataattgtgttgtcaaagctgtaccttgaagactgaaaagagtcaaacactgagtattttcaattaattgaagcaatgagtataaatagcgtgaatgcacaccgattagttttacgtgcttgtatattttgatttccccgtcaatttctaaagcaagcagatgtcttgagaagatttctgagcaacattggctcacaaatagcaagaaagagaccaattttcatggatccatcagatgctttcacctacgtcatcatcagcgtcgtcgtcctcctcctcctgccgccgccgtgttcatccgacgaccggcttgtccccggtaagccgctaacctctgatgccaccgtcgtctccgacggcggcgccttcgccatgggcttcttctccccctccaactccaccccggccaagctctacctcggcatatggtacaacgacatccctgtgcgcaccgtggtctgggtcgccaaccaagaaaccccggtcacaaatggcacggccctgtccctgaccgactcctccgacctcgtcgtgtccgacgccgacggccgcgtccgctggacggccaacgtcaccggtggcgccgccggcgccggcaacggcaacacgaccgcggtgctgatgaacaccggtaacctcgtcgtccggtcgccgaacggcaccgccctgtggcagagcttcgagcacccgaccgactcgttcctgcccgggatgaagctgcggatgatgtacacgacgcgcgcctccgaccggctggtgtcgtggaggggccccggcgacccgtcgccggggagcttctcgtacggcggcgacacggacacgctcctgcaggtgttcatgtggaacgggacgcggccggtgatgagggacgggccgtggacgggcgacgtggtggacggccagtaccagacgaacagcaccgccatcaactacctcgccatcctcagccgcgacgacgaggtctccatcgagttcgccgtccccgccggcgcgccgcacaccaggtacgcgctcacctacgccggcgagtaccagctccagcggtggagcgccgcctcgtcggcgtggtcggtgctccaggagtggcccaccgggtgcggccgctacggccactgcggcgccaacggctactgcgacaacacggcggcgcctgtcccgacgtgcaggtgcctcgccggcttcgagccggcggcgagcggcggttgccggcgggcggtggcggtgcggtgcggcgacggcttcttggccgtggccgggatgaagccgccggacaagttcgtgcacgtggcgaacgtggcgacgctcgaggcgtgcgccgcggagtgcagcggcaactgctcgtgcctggcgtacgcgtacgccaacctgagcagcagcaggtccaggggcgacacgacgaggtgcttggtgtggtcaggggacctgatcgacacggccaaagttggcctcgggagcggccacagcgacacgctctacctcaggattgcaggccttgatacgggtaaaaaatgacacacactgtttgctcctcatgttttttaacgaatcatatgctgctgattttgatttttacacatggcgttgggtaaattttcaattttttttagaaaaatctagtgtaaatattaaaaaataataagtcatcattgaaatatagttgatgataaacaagtcacaacaaaataaatgatcattcctccattaaaaaaatatagatgttttttttggctatgtagctagtgtatagacataaatgcttatatttaagcgacggatgaagtgtatattttttcttaaaaaaaagcaatgttcaaaaattatataaaaagtcaacagcattatcaatttaaaaacaaatatagcatattttatatttctatgcatcactatttctatgtccgtcttttttacttgacgttctaacatagttttcaataaaaaagttgttattttttaattacatgtttataaaaatattaaaaatgaaaatatataaagttttttaacataacaattatattaacatcatttccacatttcaaatgctaataattttaaatttattaacaatttaggatttcaatgtgtggctctgtatatttgacaatggaggtagtagtatttacaatttgttatttggatcataaaactttgcaccatactggcactgttgcacaggtggaacggcgaagagcgacgcagtcaagattgtgctgccagttttagcttgtattttgactgttctatgcatttcctttgcatggttaaaaatcaaaggtataatcaacgtatttttgtttcttagaagccaatgtggtactcataaaatgattgatatctatattcatttgtgagcaggcaagagaagaaataggcagaagcacagagagctaattttggatgtcatgagtacatccgatgatgttgggaaaagaaaccttgtccaggattttgaattcctatttgtaaaatttgaggacattgctctagcaactcacaacttttcagaagcatataagattggggagggaggttttggcaaagtttacaaggtactcttatttatttatcttgtttgtttagtaattcattttgtatgtatttatttaaatcttaatttcttctcgaaaaggcaatgataggtggtaaagaagttgctgttaaaagattaagtaaagattctcagcaaggaaccgaggaattcaggaatgaagttattcttatcgcaaaattgcagcatagaaatttggttcgccttcttggttgttgtgttgagagagatgaaaaactgctaatttatgagtatttgcctaacaaaggcttagatgctaccctttttggtatgttctctagacaagtcatacatcaaaagctcttaaaggaactcgatggtagattgcttatatttgcttgtcttgtttgtagatggctcgagaaaaccaaaactagattggacaatgcggtttaatataatcaaaggagtagctaggggacttctttatctgcaccaagattcaagattaaccataattcatagagatctcaaagccagcaacgttttaatggatgcagagatgagacccaagatagcagattttggtatggcaaggatcttttgtgataatcaacaaaatgcaaatacccggcgtgttgttggaacatagtgagtagtcatttgaattatttgatgaaattaaatttgattgagttaaaaatcctctttagtaactccttcaaatataatggtcaaacagtggttacatggctcctgaatatgcaatggaaggtatcttctctactaaatccgacgtctacagctttggcgtgttactattggaagttataaccggtattaggagaagttccacaagtaacatcatggactttccaaacctcataatctatgtgagtatatgtctattatgaagttccaatttagattaaacctaaataacattgacatttttattctataatataaacgataatttcgattgtttcaggcgtggaacatgtggaaggaagagaaaaccaaggatttggcggactcatcaattattggtagttgcttacttgatgaggttttgctttgcatccatgtagcactattgtgtgttcaagacaacccaaatgacaggccacttatgtcatctactgtgttcattctggagaatgggagtagttctgcacttccagccccaagtcgccccgcctactttgcatacagaagtgatgaatcggagcaatcaagagaaaatattcagaactcaatgaatacttttaccctaacaaatatagaggggcggtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0551500, RefSeq:Os09g0551500