Os05g0491400

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Revision as of 10:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0491400| Description = Similar to LRR protein| Version = NM_001062444.1 GI:115464618 GeneID:4339174| Length = 2207 bp| Definition = Oryza ...")
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Gene Name

Os05g0491400

Description

Similar to LRR protein

Version

NM_001062444.1 GI:115464618 GeneID:4339174

Length

2207 bp

Definition

Oryza sativa Japonica Group Os05g0491400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24196494..24198700

Sequence Coding Region

24196730..24196790,24197035..24197106,24197225..24197296,24197505..24197648,24197885..24197956
,24198407..24198636

Expression

GEO Profiles:Os05g0491400

Genome Context

<gbrowseImage1> name=NC_008398:24196494..24198700 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24196494..24198700 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcccacgtcggccggaaacctagcccccgccaccgccatcctcgtcgtggtggtggcggtggtcctggcggcggcggcggcgagccaggacggcgacgcgctgacggagttcaggaaggggatgagcgaccccgacggcgcgctggcgagctgggaccccgacctggtgaacccctgcacctggttccgcgtcacctgcaacgccgacaaccgcgtcatccgcctagatcttgaggagatgaacctgtccggccatctgtcggccgatcttgcgcgactggaccagctacaatttatggaaatcgcttcgaacaatattgaaggaccaattccgccagagtttggtaatctggagaatttgattagcctagacttgtgcaacaacaccatttctgggccgatacctccgtcgcttgggaaactcaagtccttaaaattcatgagaattgatcacaaccttttaactgggccaatcccaaacgagctggctgggctgtcaaacctcatgatcctaaatgtatccaacaacgatctctgtgggacaatcccgacgtccgggccgttcgatcacttccctccgagcagctttgccagcaacccgcggctgaggtaccccgggatggacgacgatgacaccggccgctag</cdnaseq>

Protein Sequence

<aaseq>MAPTSAGNLAPATAILVVVVAVVLAAAAASQDGDALTEFRKGMS DPDGALASWDPDLVNPCTWFRVTCNADNRVIRLDLEEMNLSGHLSADLARLDQLQFME IASNNIEGPIPPEFGNLENLISLDLCNNTISGPIPPSLGKLKSLKFMRIDHNLLTGPI PNELAGLSNLMILNVSNNDLCGTIPTSGPFDHFPPSSFASNPRLRYPGMDDDDTGR</aaseq>

Gene Sequence

<dnaseqindica>1911..1971#1595..1666#1405..1476#1053..1196#745..816#65..294#cagagcacgcactccactccacgtctccaccaccaccgcagcgaagcagttgccgccgcaaaccatggcgcccacgtcggccggaaacctagcccccgccaccgccatcctcgtcgtggtggtggcggtggtcctggcggcggcggcggcgagccaggacggcgacgcgctgacggagttcaggaaggggatgagcgaccccgacggcgcgctggcgagctgggaccccgacctggtgaacccctgcacctggttccgcgtcacctgcaacgccgacaaccgcgtcatccgcctgtgagccctcgatcctcctccctcctgttgctgcagaaagctcgccggtttcgcatcgtttcgcgttggatttcgtagagagtttagcggggatcaaatccttttccgaggtaaaggtggccgtcaatggcggtgagcgcgaggagtcgcgaggaggaagacgaaagagttttttgagttttttgtttgactcgcgtggtttttggcgtgaatctcggagcaaatccatcggtcggaaaatcgtgggacacaggattgtttgggcctattcgttggcccgatccaaacctcttgggctgggccttctcggccccaaatgttgtcacgttgattcacggctataagaagaacataatcaatgggattttttatgattttcaaagggtgagatactcttcaaattcatctgattctttgcctgattttggtttccattttttgctttaacagagatcttgaggagatgaacctgtccggccatctgtcggccgatcttgcgcgactggaccagctacaatttatgtaagctcttgtaatcaatcatgcaaattaaagttgtgtttttttttgtttgttattgttgtcaagaaagaaatgaaaaggcacatttagcagactaatgtcaatgtagtttaatttgctagtgcttctctttgtagagagttgcaagaccatcagtttttttttttttaatgccaagcccatcagttacatggagtttttattgactctttctgtcttttgctatcttgggttagggaaatcgcttcgaacaatattgaaggaccaattccgccagagtttggtaatctggagaatttgattagcctagacttgtgcaacaacaccatttctgggccgatacctccgtcgcttgggaaactcaagtccttaaaattcatgtaagttctcgttgtccatttgttatcatccctcacctgaccttttccactcaagtaattaatgcccggattatctgtaattaatgtaagttcatgtgcacaagtcttaaaaaaaacttatatctgaaatcagaaagtactgttcagctatgcaaaatgtactttgatatctatgtttgagtttttgttttttctttactcttggcaggagaattgatcacaaccttttaactgggccaatcccaaacgagctggctgggctgtcaaacctcatgatcctgtaagaattcacaactcagctcgatccaacttttgttgccgtaatttacatttacaattatccttcaccctcatgatacttaaaattatcccctgtccttgctcttaatttcattcagaaatgtatccaacaacgatctctgtgggacaatcccgacgtccgggccgttcgatcacttccctccgagcaggtatagtagcaggcgtgaataattctacttgccttgttcttctccatggcacattatcaaatctgcagtttacttttgatctgatgaacactgcaagaacatgcatgataagcagtttaattttgctctgatggatactgcaagaacatgcatgataggtttttcgctaatgctaatgctgatgctgatactgatcaatgttaagttgcgctaatttgttaatttgtgtcttatgtatatgaagctttgccagcaacccgcggctgaggtaccccgggatggacgacgatgacaccggccgctagatcatggcagcatgaattaacgaataaaaagaagaggacggcggcggcgtcaggttcttcaccggaagcaagcctcgtcggcgtcgatcggtgcagactctgtcgacctggagcttcttagcattagagtagcttggccgtaatggtaatgctaatgagtaatgacaatgattattatctcagcattacgtacttctgtttactggcatagtatatgaaatcgatcgtcttagctc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0491400, RefSeq:Os05g0491400