Os05g0491500

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Revision as of 10:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0491500| Description = Similar to Transfactor-like protein| Version = NM_001062445.1 GI:115464620 GeneID:4339175| Length = 3965 bp| Defini...")
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Gene Name

Os05g0491500

Description

Similar to Transfactor-like protein

Version

NM_001062445.1 GI:115464620 GeneID:4339175

Length

3965 bp

Definition

Oryza sativa Japonica Group Os05g0491500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24201248..24205212

Sequence Coding Region

24201615..24201932,24202129..24202198,24202400..24202457,24202577..24202619,24202704..24202780
,24203363..24203570

Expression

GEO Profiles:Os05g0491500

Genome Context

<gbrowseImage1> name=NC_008398:24201248..24205212 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24201248..24205212 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgtaccatgcaaagaagttctctgtaccctttggaccgcagagtacacagagtaacgagcatatgagtaatattggagcttttggcgggtcaaacatgggcagccctgctaatcctgcagggagtgggaaacaacggctacgttggacctcagatctccataaccgctttgtggatgctattgctcagcttggtggacctgatagagcaacacctaaaggggttctcactgtaatgggtgttcctgggatcacaatttatcatgtgaagagccatttgcagaaatatcgccttgcaaagtacataccagaatctcctgctgaaggctcaaaagacgaaaagaaggattctagcgattccctctctaacacagattctgcaccaggaatgcaaatcaatgaagctttgaagatgcaaatggaggtccagaagcgactccatgaacaacttgaggtgcaaaggcagctgcagctgagaattgaagcacaagggaagtacttgcagatgatcatagaggagcagcaaaagctcggtggatcactcaaagcttgtgaggagcagaagctaccgcattcaccaccaagcttagatgactacccagatagcatgcagccatctccaaagaaacccaagatggacaacctgtcacctgattcggtacgggatgtgacacagtcagattttgaatcccatttgattggtccttgggatcaagaggctgcattccgagtggatgaatttaaagctgaccctggtctgaacaaatcataa</cdnaseq>

Protein Sequence

<aaseq>MMYHAKKFSVPFGPQSTQSNEHMSNIGAFGGSNMGSPANPAGSG KQRLRWTSDLHNRFVDAIAQLGGPDRATPKGVLTVMGVPGITIYHVKSHLQKYRLAKY IPESPAEGSKDEKKDSSDSLSNTDSAPGMQINEALKMQMEVQKRLHEQLEVQRQLQLR IEAQGKYLQMIIEEQQKLGGSLKACEEQKLPHSPPSLDDYPDSMQPSPKKPKMDNLSP DSVRDVTQSDFESHLIGPWDQEAAFRVDEFKADPGLNKS</aaseq>

Gene Sequence

<dnaseqindica>3281..3598#3015..3084#2756..2813#2594..2636#2433..2509#1643..1850#aaagaaagaaagagaaaaaaaaaaaatccccccaaatcccaaggcctccctctcctctctctctctcgctctcccctccccgcgcgtcgctttcgccggacaccaccgccccccgccgctttcccctcctctcctctcctcgcgtcgcctccttccttccctttttgacccccccaattcccaactgggaatcccccctcggacggcggcggaagcggaagcagcagaggagagcatctggttcccctgcgctgcccgctttttggtggtggtggcggcggccggcggcggatcgctgcctcgccgtgccggtaaggtaagtccctctctcgcctctgtgagctcccgttgcggcggtttggttcggcgcgcccctggtcggtggtggtgggtttgttcggcggaggaagaggagggggggggggggatcctgggaggcggaattcggggtggggggtgggattggatgccggagcacgaggttggagtctgtgcttaggttagcatgcgagtttaatcattaatgagcttggatgaattttctagcgtttctttttttttttggtgagttgataaggtatggactggtgaaaaaaatgcgttctggatgtggcggaaatgccttggtttattttgggatctctttatgtttctgtagttgtgtgatggccatgggtttatgatgatggctgtgtcaacttgattactggaagggttggtttgatgttttgtattgatcctgatcctggtatctgcgccgggtttgtggccatggtccggtccagtttatgtctccagtgatgtgtgcagaattcattcttatgtttgttgaagaacgtatcagtgataattggttgtgtagtttcgatggatgtgtagatggtgcttgctcttggcttcttgggtggtcaatgatttgtaggcttaactggagagtctctgacgatatcgtctgtttatttttgtaaattcagagttttctgcttcctgatagtagcagatgcttaacagttttatttgtttgccctatctctgctcatggaaggtggagtagctgggtgtgtgtgtgtgtgtctctgcagtcgttgcttgcaaaaactatgtgtgcctgccatgtggaattaagctgactttgagttattgttttgatacgggtatgcagcaatggcctttagagttgaactgctggcattaagcgtgttgttttggatagcacataatgatccttcggttatatgcgttaatattgtctttcatgtttttcttaatgcgaatagcattgtttttttttccataattttgttaggctagtaatagagcaaaatatgctcttccaggttggttttggtgtttgaatttagtttacccttctttgattgctattctgatcattatttcgtagtgcttattgttttatcatttttgtaaagtaaggaatcgaggctcctgttgagaaactctactactccaccatacaattatgctagttatagaacaaccagtgagtgttctgacaatttactacatgtgatgtgctacgttttagtcacttgactctggattttcctcatgataaatttggtatctttacttggcactacatatatttatgatgtctccttacaattgttgcagcattctcatgatgtaccatgcaaagaagttctctgtaccctttggaccgcagagtacacagagtaacgagcatatgagtaatattggagcttttggcgggtcaaacatgggcagccctgctaatcctgcagggagtgggaaacaacggctacgttggacctcagatctccataaccgctttgtggatgctattgctcagcttggtggacctgatagtgggtattctctgtcgagtattagtcgttgtggttgaacttaatacaatgtttaaactgcggtctacaattcacttgtcaatttcctttttttacgtctcatgtatctctccatcatcaataattttgaagccctatcagtaatttacatagataaaatcttgcaaattaatgttatatttaacaagctggacatctgaatatttagtatcagtttacatcacatgggctcattcacaacagaaatctgtcagattaaaattgaaaaggataagaggatagcatgcacatacttcagaggattcttgttatttttatgtatatctcgccttatagctgtggtcgtccattctattaagttcaatcacattgggaaatgttcatgccttgaaactgcaaactatgtcaataattggaaactgctttgaatattgtgtggtgcacatgtgtctggctctattacatgctaacttgtctagtggtaagctagcatgttactatgcgattgatcagtttattattttaaaatacaagaagtacgatgtatctaacacgcctttctgcatattatcattgcttcaggagcaacacctaaaggggttctcactgtaatgggtgttcctgggatcacaatttatcatgtgaagagccatttgcaggtgaattttctctttaatgaaacaggtattaagagttccattgtaggcttgtagctaatactgtctttctttgtgcttatgcagaaatatcgccttgcaaagtacataccagaatctcctgctgaaggtacgcatcttctatgcttcacatactatctcttaacttacctttcccttccaccttgctacatctggaactagatggctatttttggttttgaatgttactgttggcatcttatgtaggctcaaaagacgaaaagaaggattctagcgattccctctctaacacagattctgcaccgtaagtgatcttactcagtgacttgtacacaagttcatatcctgtagtagtgttatcttgtatgctggttgatacaaacttgatcttactcagtgacttgtacacaagttcatatcctatagttgtgtaatcttgtgtgttggtcggtacaaacttcttagatttacatagttgatataaatattattgcttacattgcagaggaatgcaaatcaatgaagctttgaagatgcaaatggaggtccagaagcgactccatgaacaacttgaggtctgctgttataagatgttaactagtgtcaccttgggaatcttttttgcatcatttaacttgtcgacaaaccaaaatttcctctagcaaattggagttacaccttgagtatttttccagtttgtctttttttccctgtcaaggttaagccttaaatctctttcagttaatatgagaaccattgcaatttccttaggtgcaaaggcagctgcagctgagaattgaagcacaagggaagtacttgcagatgatcatagaggagcagcaaaagctcggtggatcactcaaagcttgtgaggagcagaagctaccgcattcaccaccaagcttagatgactacccagatagcatgcagccatctccaaagaaacccaagatggacaacctgtcacctgattcggtacgggatgtgacacagtcagattttgaatcccatttgattggtccttgggatcaagaggctgcattccgagtggatgaatttaaagctgaccctggtctgaacaaatcataaagcaaaacctcactcatcggaaattcttgatccaagatgttaacctccactgcgggccgatcgcatgtgaatatatatcctcttaacaacagagcgagccttgtaaggatctttggatccacatctgattccttcaccacggccaggtgttgtcgtcactgtagtattcatcatcatcatacagctcttgtaattatcaggatgtcctaaaagccctagcaagcaattttccttcttttgaagggaaattgccctgagttgaatcatgtagccagaaagagtacacatttacacgcaatacatttgctgtgaagagggtgtgcctccctgaagttatatgtgaatgatttgtgttagattcatagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0491500, RefSeq:Os05g0491500