Os05g0492500

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Revision as of 10:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0492500| Description = Hypothetical protein| Version = NM_001062451.1 GI:115464632 GeneID:4339180| Length = 7977 bp| Definition = Oryza sa...")
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Gene Name

Os05g0492500

Description

Hypothetical protein

Version

NM_001062451.1 GI:115464632 GeneID:4339180

Length

7977 bp

Definition

Oryza sativa Japonica Group Os05g0492500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24241816..24249792

Sequence Coding Region

24244671..24244700,24245603..24245947

Expression

GEO Profiles:Os05g0492500

Genome Context

<gbrowseImage1> name=NC_008398:24241816..24249792 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24241816..24249792 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgataggtgcctggcatttctttctgtggtgctattgtttggaagattatccagtctcatgcattcgtcaatggagacagactgcgctaggtcatgcatggcatcatgcatcacgtatccatccttgtgtttttggaagaaggatctgctcagtaattcatcaaaatagttattcccaatctcttccatccttctccgcccttgaggctggatgtacccaactgccatccagatctggaccaatatgtctttctcaaacacatagtctttgtgaaagaccgagcagaatgcaaagcatcgcttcaatatgggtggaagatgattgtaactcagtctcagagctgcagaagcagattctaaccttcagatggtga</cdnaseq>

Protein Sequence

<aaseq>MIGAWHFFLWCYCLEDYPVSCIRQWRQTALGHAWHHASRIHPCV FGRRICSVIHQNSYSQSLPSFSALEAGCTQLPSRSGPICLSQTHSLCERPSRMQSIAS IWVEDDCNSVSELQKQILTFRW</aaseq>

Gene Sequence

<dnaseqindica>5093..5122#3846..4190#gggggaaattctcggcttgcggcggcttcggcggcggcggcgccgccgccgcggcgcggggctaccgccggttcgtatctccgcgaaccggagacgtggaagggggaggagagatatagcgagtgtgtgtgtggagcgaatctacaacgcgtccttcgttttttttggctgtaagttcgtggatttttactagtcgggtttttctaattaggtcagagaaagcgcctctgagatttgatcaccgtatattgtgctatacatatatggtatcgttgtactgatgttcatagttttattttggaaaattacttaattttgaaatgccccaatcataacagacctagagaaatattatgggataggctgtgtaatacagttggtcaggaaaaggaaacgtaaaggtgaacattggaccatgcttagttttctttcccttttgaatggataagcatatgcctagttgaactatattaggtgataaccaaactttgataagaagattattatacattcttctggagtggtaactggtcaattttggaccttcgaatatggcttgatagacataaatagaagcaagaattcagtcttcattgatttcttcagttcaattttgggaaatctgtaacaaaagactcagtgtcccagaccatctaaagagaaagaatcaattcaaacttgacttgattctttgaagtattgattgattgtctggtcgtccttctctgtcacattaacatagcacatcctgatgcaggtagaatatgagattctcttgaaacgctgacattgccatgcatgaggaatctagatggcagttctgaaaataacgggcttgtttggtttgaaaccctaccaaaatattggtagtaccaaaccttgggcatattttggcactaccaaattttttatagtaagtagccgagaatataaaagaagaaatcgtggtgtggagggtagctgggatcttctcccaattcagcgagtaatcgttgttgtattgtctctttctccttcgtttgttcacgctgtgtctgggatctctcccggactagcgcgacattgtaatgtcgctgtaacattcctttgtttttctccccaatcttaatgaaattggtcggccaacctttggccgacccggcaaaattttttttatagtatagatttggctccactctattgatttggcaaaatttggctccaatccaaaatgctaacatgcactattcaaaactaccaaagaattggtagggcaagaattggcaccaaaccaaaatggtccaacataaaggcgaacagatgagtaacgcataccatttgactatagttttctcatcaaatggtgattgtaatatagcatttttaatttatactccctctgtcccaaaaaacacccactccatgggtttgaatatggacataggcccagaagagggttttcttttgggggggacggggggtgtagatgtttccacctaaaaggcaatgatattaactgttctgcataacacaactgaccaaatgaactgttattatgcattcatttttgcatgctcgtcaaacttcttcctatcagaaccgatgaaactgcttcaaatttttagtttgtaatatgaagatataagtgttgaccatgacaatctgaatttcatttcttgtggacaaaaaactgtttacatatgtcatgctccaaaattcttctatcataaaagagatatacatgctctccttcctggttccttttagttacattgttagtactgaaattctttgtcccgttatttcttttattcttttctgttgttttctgtttggtggaaatcactcaatcttaactgtactctatcgctacagttgtttaccatagtttttacatttcgagtgtattacttctgtatctgataaatgttagtaattatgttaaaatagaactttgcactggagataataaactgaatatataccaattgcacctgcagagaataggtttgagtatgatgttcacagccagccttatctattatatttagacaaaagaaactagagaaggcaattaattcataccctttttgttgagttgctaagaagcttttagcataatcttctccttatgctcctatctggcatggcactatcatcgtcaatctctatgatggctatatgagatattttaggccaatcttctccactgttttcttgacacctctctgccagaaatgggcactctttgatgtataattcttctaaggacagtggaagtccatgtgctggcaagcattttatgctaacacaatttaagatagtcatagtttttagacaagaggcttcttgtaaacaagcaggcaaggaggccagattactgcaattgaagatctccaattttttgagggtagccggtaacttttctggaaaagtattaaggctaacgcaatccgcaatgacaagattcttgagagcaaagagctcattaagttcatcaagaagaggattgattatgttggagcatgaggtgatgcgtagatcttcaatcatgcgaggtagtaagccacgatgttctgctgttgccagccttggacaatcataaatgtgaagactctgaagagcagttaaagttcgtaatccttcagttggggggtgaattagttctggacagttagtgatggttagttgctggagggctgataattgctgactaagcaatccttgctgcaaggatgtgagattggggcatttgtgaatctgtaggcgtgtcaatgatggtagaaatcttggagcatgaacttcaggaagtacagaaaagcctgcctcagaaattttcagttccactagtgttgatgggagaagtggcaattctgttactttgggacagtcaagcacttgaagttctctaaggaatggaagaaactcaccatcttgtgtggaagtccacctttcgagattaggcgtgtcttcaaatacaagttctttcagtgacggaaaccccttaacttcactactacctgaaaactcatctccaattttaataatggtaggaaaacccccaatgattataaccttgagtagaggcagctgtccaagtgctggcagaattgaacaatttgtacagtcagacagatggatagtttgcaaatgtgagagcctatccaatgtggaaattcgaatcctgcaaatgccttgactgtcagctccttgagttcatcatgtggttcgagggatgtgagtgtttctatgtcctggtttgcttcttctgaagtaaaatccctgctactggaccatataaggtctagaatgctgatgtgtgccttctcacttagcaatgcttcatctgcttcttccgcactagacacgctctctagatttttaatgcagatatgtcctccgatcttattcatagccttcaattcactaaccttgtatcctttgtccttatggacaacaaattcctccaacttttgaaggcaagtcaatttccctattctggctatgccagtgatcagttcagttcttgcttcgagggataggagatttacaagattatgcgaggcagtttcgtaacttaagtgtttgcaagcaatagagcttaccaattgatgaaggcagctttcttacaacagtgcctgataggttcaagtatcggagcatctttaattttccaacagattctggcaattctgtaatttcttgtcggttcaaatcaaggacatggaggtaccttaaattgaggaacagatcactggggatagagcttgtctttgatttatatccattcagcagtagaaggctccgtgctctattaaatccacgaaaagcttcaaatgtagtttgacttttattgtcacaagagaatgataggtgcctggcatttctttctgtggtgctattgtttggaagattatccagtctcatgcattcgtcaatggagacagactgcgctaggtcatgcatggcatcatgcatcacgtatccatccttgtgtttttggaagaaggatctgctcagtaattcatcaaaatagttattcccaatctcttccatccttctccgcccttgaggctggatgtacccaactgccatccagatctggaccaatatgtctttctcaaacacatagtctttgtgaaagaccgagcagaatgcaaagcatcgcttcaatatgggtggaagatgattgtaactcagtctcagagctggtaagatattattcttgtctgatggcaattcccatatttcactttctaggatatttttccagtcatcctcgttgtccttagcacataataagctacctaaagctcttgcagctaatggtaggcctttcaacttatggacaatttccttgccgatcatttccaaatttgggtgtgcactggagtcaccatctgcaaatgcatagcttctgaataaatgccagcaatcattgtatgataactgttttagatagtaaggagtcaacccgcccactaatttcccaacattttcatttcgagtagtcaccataattttacttccttttgcaccagcaactagagcacatcggtatctatcccatctatcaggatcctcattccatacatcatccaatactagaagaaaccttttgcctttcagcttgtttgagaggtcttcttgaagcaagttcatgtttgttgtggcggatgataatccgctcgcaactgattctatcgtttccttggtaagtttggcctcatcaaagttttcagaaacacacagccacattcttaactggaaatgcttctttactctcacatcattgtagacgagctgtgttaaagttgtcttccctactcctcccatacccactatgggaagaatagaaaggttgacatggtttgagttattcgtggtgagtaacatgtttacaatgacctctttatcttcttctctaccatacacactcgagtcgtcaattaacgaactggtcttgggcctctctcttatctcttccctgttaaacctcatgatcggatcgacaatatgtctgtctttaataagcctatcgatcttcccctcaatccgcattatttgttttactaaatctctgttaaataacccatttttcaaccaaatgcagcagaagcagattctaaccttcagatggtgatagttggatgggcctgcaagtttggatcggaggacttcagcagcatgctcatcaagcaggtcatccatctcataggcgacgtccttcagcctggaaagccagcttcttgccgcctgatctttcagctgccgctcctctgcatcttcaacgtgagccagaattgtcgacagactgcttgatagattctgcagctccacagctatgttttgagggaatttcagctcgctggaagcagcggccaccgctttctcgaaaagcgcctgcatgaacgcggacagcacagcttctccgattggcatagtctattagtgtacaatctgttatgctttcagtataaagctgggcagcaatgcctcttctctaaaattagtgtacaatctgccgggatgtgaatcggaacagcaggtgaggatgctgggggactcaacttggttatatctctagtattgacccgaagactttgtgttgctaccagtggatactatcaaaaactgattcaactctacatggtttatgcagttaaattagcacaggaaagtacgagacaagttgtcaagagtcaagcttgatgaaccccaagtgacgagtcaagtctgcaatttcctggttaggccggtgaaaggagcatgttggacttttagaaggaaaagacactgctgcaggctgcaacttggccacaacttcagtgtaagacagctgatgtgtaagtttatcacattcttcctcctgtgatagtcaaccatctaccttataattcgccaactcattttactcatcatcatcattggacaaatccaacgcccctcatcgctccgtcctcatcaaacggtccaaactcatccacgcgctcaccctctctccccgtaatttccgctgcccccttccccaatccccacagcgcgtaactcccgtcgtccccctatctcgcaattctaaaaaaaaaaaaaaatcgcccctcaacctcccgtcgtcagctcgtccacccgcccgcgccgatctctcccgtcagcgtctctgtcgacgccgtcgccctccaagacgatctcctctgcaccgccagaactccgtcgcctccctcgccgaactgctccgcccataagctgctgcctcctccatcaacgtgatgccgcctcaagcgccaccggtgccaacccatatcccctcctccacgaagaaaccctcctcccccacccctcccccttctctgtctccccatccctaatatgtttcctaatatttcagttctgttatcccttttttcactttgcaatcatttcgttggcccaatatttttgtgccatttgatgctaatgttgataatctaattcagtgcttgaagtgtccatctccatagtatcaaatttgaaccctgcccagaattactatattgattgcagagcaacaaatttgtgaaaaaaatggaagttaaaacaaactgcttatgtgtgttgatcatttaattgttaaagaagcaaaaagacattctttgtcaccactggtttgaaaaatcaaaatgtagtgtaacataagcttgggcgatttgcttctaaggttgagcagagtaggaaaaaaataagtacgagttgtcacgcaggtagtgatgggatcaaaacaaatttgcaaacttagttactgaaaaatttcctgtcaattgttgttcatttaaaatataacaaatatgctttttttcttgactctccgttgagaaaaatatgatgtcattatatatccatatgcagaacaacttctatcaagggcgttgcctcgccgttgtttcttccttaaggaatcgctggtgattatccattcccgtatcactgcaaacagctgctactgtcccttcctgtatctcattccctgaattgaaggtacaaccagtttcttcactattcccttaactcctacatatgggatctgaagtttttagatttttcataatggtgttcctatttggattgtcgagttttcagattttttttaatgggattcctgtttaccatgcaattctgaattggtgaccaaattttataggttttacatgtgtgagtttatcactggtgctgctgatgttatagtcaaatgaacactgcattgctaatatttttgagttcccctggtgctcctgctgcacatgcccatgtattctatcattatcctttaagatggtgcacacaatcgtatattttgtctggttcataaaaagcataaaaaggacctgctagaaggaatcacatttgctgcctggatttatgagatgactcaacaaatatttcagtttgtggtcaaaagaatgggcagctgctcctctgagggtacaaaggaagggttttaaataaagtgtatttactaaaggaacagaaaagaaacatgtttgtgatcataagctgattgctcgtaaaccatatgctttggtgatggcatgtcaatatgattatgtgtgtttaattcccaaattactatagatattctgacaatttaacaatgtgtcagattccatttttagcttgggtgatgcttcattgattttttttcatgtatttaatgcaaatcatgtgctaatatttgtgtggagttgttttgttgccctttaggtggtacatacagaagagccctaactataggcaaaggaggaaagaggcatctgtcgcaccgcgcgcctctgctgctcaaaaggctaaaatcatgcgattttgtgcttagtccagtaaacattgggaagttagaaggtggtcgtattgagcggattcaccgacaagttcttccttgtcattatatggctattggtttgtataatagtatgtattttcaagacttgaagtgcacattttcaaaattgttcagaagtccttttgagg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0492500, RefSeq:Os05g0492500