Os05g0493100

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Revision as of 10:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0493100| Description = Similar to KI domain interacting kinase 1| Version = NM_001062452.1 GI:115464634 GeneID:4339183| Length = 4090 bp| ...")
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Gene Name

Os05g0493100

Description

Similar to KI domain interacting kinase 1

Version

NM_001062452.1 GI:115464634 GeneID:4339183

Length

4090 bp

Definition

Oryza sativa Japonica Group Os05g0493100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24277853..24281942

Sequence Coding Region

24277950..24278808,24279375..24279521,24279615..24279745,24279886..24280096,24280184..24280421
,24281107..24281248,24281366..24281680

Expression

GEO Profiles:Os05g0493100

Genome Context

<gbrowseImage1> name=NC_008398:24277853..24281942 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24277853..24281942 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgccgccgccgtcgccgccgtgccggccgcgagtcaagcccgagcgcgcccttctgtgcttctccctcctcctcctcctgaccgccaccacggcgaacgccagcatcaccgactgcccaactacaagcagcaccaactccagccatgtcgacgacggtgccttcggggccaacctccgcgctctcctctcctccctttccgcagccgcggcggcatcgtcgtcggggttcgccgagaacgcgaccggcgcggcgccggacacggcgtacggcctcgcgcagtgccgcggcggcatcgtcggcggcggcaatggcaccagctgccgctcctgcctcgacgactcggtgcgggacgcggccaaggcgtgccccggcgagaaatccgccgtgatcatctccgactactgcctcgtccggtactccaacgcgagcttcgccggcgccgccgacgagcggacggtgaagctctggtggaacacggacaacgcgacgcagccggagaggttcaagtcgctgctggggacgctgatgggcaacctcaccgacgcggcggcgcgcgcgtcgtcgccgctgatgttcgcggccggcgagaccgacctcccgcccttcaccaagatctacggcatggcgcagtgcacccgcgacctcgccgccggcgactgctaccgctgcctcgtcggcgccgtcaacaacatcccgaaatgctgcgacgggaagcagggcgggcaggtcatcacgaggagctgctccatccggttcgaggtgtacccgttcttcgacgcccaggccgccaaggcggccatgtcgcctgcgccggcgccggcgccggtgacgacgcccaccggggtcaatggaagtaatcacacagtcagtaagtctgtgattgtcccagttactgtgggagttgccgtgttactagtggtaatactgctgctaattgccctttgtctgtgcaagaggaacagaaaaccacataagcatatgatgattggaagcgtcgatcttggagatgaagacgaaatgagaggctcagaatctctcttgtatgatttgagtactctaagagcagcaactgccaacttctcagaagaaaataagctcggagaaggtggatttggcccagtctacaaaggtacactgcaaaatggtcaagagattgcagtgaagagattgtcagcaacttcccatcaagggcaattggagatgaagaatgaggtagtcttggttgcaaagcttcagcacaagaatctggtcaggctgctaggatgctgcatcgaagaacgggagaaaatcctagtttatgagttcctctgtaacaaaagcctcgacactatccttttcgacacttcaagacagcaagaccttaactgggagcaaagattcaagatcattgaagggatcggaagagggcttctttatcttcatgaagattcaaggctcaagatcatccaccgtgatctcaaagctagcaacatcttgttagatgtagacatgaaccccaagatatcagacttcggccttgccaagttatttaacatggaagcgagcgtagcaaacactagcaggattgctggaacctacggatacatggcgccggagtacgcgctgcacggcatcttctcggccaaatccgacgtcttcagctacggcgtgctcctcctcgagatcgtcaccggccgccgcaacacctgcctccatgactccgaggatctcctggcatttgtctggaggcactggagccgcggcggcgccggggagctgctcgacggctgccccgccgccggccgccggccgcaggagcttctgcggtgcatccacgtggggctcctctgcgtgcaggaggacccgcagctccgccccggcatggcggcagtcgtcgtcatgctcaacagccgctcggtcacgctgccggcgccctcggcgccggcgttcgtctccgcgagccgtgggatcggcggaagcccgccgccggcggcggcggcgggagatgcgccggcgaggagcacggatcacgaggttcctacggctgctcgatag</cdnaseq>

Protein Sequence

<aaseq>MAPPPPSPPCRPRVKPERALLCFSLLLLLTATTANASITDCPTT SSTNSSHVDDGAFGANLRALLSSLSAAAAASSSGFAENATGAAPDTAYGLAQCRGGIV GGGNGTSCRSCLDDSVRDAAKACPGEKSAVIISDYCLVRYSNASFAGAADERTVKLWW NTDNATQPERFKSLLGTLMGNLTDAAARASSPLMFAAGETDLPPFTKIYGMAQCTRDL AAGDCYRCLVGAVNNIPKCCDGKQGGQVITRSCSIRFEVYPFFDAQAAKAAMSPAPAP APVTTPTGVNGSNHTVSKSVIVPVTVGVAVLLVVILLLIALCLCKRNRKPHKHMMIGS VDLGDEDEMRGSESLLYDLSTLRAATANFSEENKLGEGGFGPVYKGTLQNGQEIAVKR LSATSHQGQLEMKNEVVLVAKLQHKNLVRLLGCCIEEREKILVYEFLCNKSLDTILFD TSRQQDLNWEQRFKIIEGIGRGLLYLHEDSRLKIIHRDLKASNILLDVDMNPKISDFG LAKLFNMEASVANTSRIAGTYGYMAPEYALHGIFSAKSDVFSYGVLLLEIVTGRRNTC LHDSEDLLAFVWRHWSRGGAGELLDGCPAAGRRPQELLRCIHVGLLCVQEDPQLRPGM AAVVVMLNSRSVTLPAPSAPAFVSASRGIGGSPPPAAAAGDAPARSTDHEVPTAAR</aaseq>

Gene Sequence

<dnaseqindica>98..956#1523..1669#1763..1893#2034..2244#2332..2569#3255..3396#3514..3828#attaacgagttgttgcttcctcctcgagagagctcaacggcgacgaagcagcgcgacgcgacgcgacgccctgcggtggcgtggcaacaccgcaacaatggcgccgccgccgccgtcgccgccgtgccggccgcgagtcaagcccgagcgcgcccttctgtgcttctccctcctcctcctcctgaccgccaccacggcgaacgccagcatcaccgactgcccaactacaagcagcaccaactccagccatgtcgacgacggtgccttcggggccaacctccgcgctctcctctcctccctttccgcagccgcggcggcatcgtcgtcggggttcgccgagaacgcgaccggcgcggcgccggacacggcgtacggcctcgcgcagtgccgcggcggcatcgtcggcggcggcaatggcaccagctgccgctcctgcctcgacgactcggtgcgggacgcggccaaggcgtgccccggcgagaaatccgccgtgatcatctccgactactgcctcgtccggtactccaacgcgagcttcgccggcgccgccgacgagcggacggtgaagctctggtggaacacggacaacgcgacgcagccggagaggttcaagtcgctgctggggacgctgatgggcaacctcaccgacgcggcggcgcgcgcgtcgtcgccgctgatgttcgcggccggcgagaccgacctcccgcccttcaccaagatctacggcatggcgcagtgcacccgcgacctcgccgccggcgactgctaccgctgcctcgtcggcgccgtcaacaacatcccgaaatgctgcgacgggaagcagggcgggcaggtcatcacgaggagctgctccatccggttcgaggtgtacccgttcttcgacgcccaggccgccaaggcggccatgtcgcctgcgccggcgccggcgccggtgacgacgcccaccggggtcaatggtaagtcaagtcaaaggtctctcccgtgcgcgtttgcacttgcgtcgctttctccacgcgtttgcttgtataggtcgcgaaaagaaaaaagtttagttgtcatattggatatttgatcagatattggaaggagttttcggacacgaatgaaaaaactaatttcacctggaaaccgcgagagcacacgtgggttactatattacttatgactaattatggactaattaggattaaaagatttgtctcgtgatttccccccaactgtgcaattaatttttttaatctatatttaatgcttcatgtatatatctaaagattcgatgtaatgtttttggaaaaaatttatgggaactaaaccaggccttaaccaggccttagtagctggttgcaacttgcaactttctgactctaaattccgaacacttgttctcttcttcaaccgtgttttctccttcaaccttgtcgagtggacagaacaaagtggtttgcacccatagattctgatagtacaatgacttttgtgctctgaatttgtgttttgaccatggtaaaacatgtttatgcaggaagtaatcacacagtcagtaagtctgtgattgtcccagttactgtgggagttgccgtgttactagtggtaatactgctgctaattgccctttgtctgtgcaagaggaacagaaaaccacataagcatatgatgattggaagcgtcggtaagtcctcaaggcttgaaacaactgcattagcattatagcacatctgaagaatatttaagggcttaactcgtcagtttttcctatgaacagatcttggagatgaagacgaaatgagaggctcagaatctctcttgtatgatttgagtactctaagagcagcaactgccaacttctcagaagaaaataagctcggagaaggtggatttggcccagtctacaaagtaagttaagtctgcaacctgacaatcaagttcagttctaattagcctgtaaaagtagctcacagattcatacttgcagttatgcaagcaatgtgatctacattacttgaacttaccgattctgatgctgttgagttcagggtacactgcaaaatggtcaagagattgcagtgaagagattgtcagcaacttcccatcaagggcaattggagatgaagaatgaggtagtcttggttgcaaagcttcagcacaagaatctggtcaggctgctaggatgctgcatcgaagaacgggagaaaatcctagtttatgagttcctctgtaacaaaagcctcgacactatccttttcggtacttcattcagataatctaagcctatttaattttatatatccttgtttagtaagctaatcaacagaatttacatggacaattcagacacttcaagacagcaagaccttaactgggagcaaagattcaagatcattgaagggatcggaagagggcttctttatcttcatgaagattcaaggctcaagatcatccaccgtgatctcaaagctagcaacatcttgttagatgtagacatgaaccccaagatatcagacttcggccttgccaagttatttaacatggaagcgagcgtagcaaacactagcaggattgctggaacctagtaagtgcttcagatattagagtcctctcttgaaaaagtatatctatactaaatgagcactcgaaggaaactcccacgttaacttatgaaagatttgaccattaattagataattgtattatcatgaccatatatcatattaagagtttctgtaaaataaaacaggtggttttaaatcagtgagctcattttagtttttctaaaatatagtaatattttaagaattcggaattgataaatatgaaattgtacccatattgaattctcaatttagtatgtcattgatttaattttaagattcgaaaataataactaagaagttgtaagttgttaatggcatatggtctcttttttcaacttgaatgtcactccctccgtttcatataataagtcgtttggttttttttttctagtcaaagtttttaaaatttgatcaaatttataaaaaaatatatattattattttcaacacaaagcgatcatattattagatttaatgaaactaatttgatattttagatgttgctaaatttttctacaaacttgattaaatttaataaaatttaactatgaaaaaggtcaaacgacttgtaatattgtaatatgtaatatgaaactgatagagtattacattactatcatttggaaatttgagctgagagcattagatatacctcttgttcagcggatacatggcgccggagtacgcgctgcacggcatcttctcggccaaatccgacgtcttcagctacggcgtgctcctcctcgagatcgtcaccggccgccgcaacacctgcctccatgactccgaggatctcctggcatttgtaatccccgcgcaaatcctatctaaagtttaatcacaaacattgcaatctgcaattcgaaagacttttgcatggatatacaaccgtctgagactgattctgctcgccggcgtgcaggtctggaggcactggagccgcggcggcgccggggagctgctcgacggctgccccgccgccggccgccggccgcaggagcttctgcggtgcatccacgtggggctcctctgcgtgcaggaggacccgcagctccgccccggcatggcggcagtcgtcgtcatgctcaacagccgctcggtcacgctgccggcgccctcggcgccggcgttcgtctccgcgagccgtgggatcggcggaagcccgccgccggcggcggcggcgggagatgcgccggcgaggagcacggatcacgaggttcctacggctgctcgatagccgtcgatcaacggcgcttctgtctctgaactagagccccggtgacatcggagattcggaggactgacggctgggcccggcttatgtttctgctctgaatttgaaaatttgttgctcgttttgcattcaaaatttctctcggatttaatgcatttctgtatgccgttcagtgttggagtagttaagtggatatgaaaatgtaatgacggctttgtaatttaaatttttcgacgagcttagcaattcaagtggtttatgtagt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0493100, RefSeq:Os05g0493100