Os09g0540900
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os09g0540900 |
|---|---|
| Description |
RNA-binding protein Lupus La domain containing protein |
| Version |
NM_001070346.2 GI:297609883 GeneID:4347728 |
| Length |
5323 bp |
| Definition |
Oryza sativa Japonica Group Os09g0540900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:22130533..22135855 |
| Sequence Coding Region |
22130533..22130547,22131050..22131135,22132101..22132233,22132299..22132376,22133165..22133251 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:22130533..22135855 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:22130533..22135855 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcgccggccgctggtggcgccgccccgacccagctgccgccgccaccggttgctgcctccccctccccccctccgctggctgcggcggcggcggcggcggcgatcgcggggcccgagggcgaccgcgcgccgccgccgcaggggaatcggcgggatccggctggttccgcggagggcgccgatccgggcaatgcggcggcgaggaagacggcgtggaacgtgccggcgccgcccctcgccgcggcggcggctgcgggggcgggggtgggggtccccggcggcggcatcatggggggcgggcccgggtcgtggccggcgctcgcggagtccgcggcggcgcgagggtcgtggcccaagtcggcgtcgtcggactccctcaagtcgctctccgatggctccgccccctccgcatcggaggatttgattgtgccatctgtgcaaccgcatccagttgctaatccgatctccggtggctcaaaccctacctcttcgcccccacctcccaatgctaccgtggtggttacctcggaacagaacggcaacacagaccagtcaaatccagttcggcatagcagcggtggccactgtgctggtagtaatagcagccgtgatggaaacactagcgatggtggtgatgggagctggaacgacggaggccttggtagtggaagcggttccaacagcagctatggacacggcaacagcaccaacggtgctggtggtgcaaatatgaacaatatcatccatagcagtggcaccagtagcagtgccaatgacagcagcaggaggatatctggcaataacaactggaacaataacggacgcagtgctggcagcaaccataatgctgctggcagtggtgatgggagcaacagaaacctctggaacaacaatggccgaaatggtggtggcagtagcaatggttttgttggtcgtggtggtcaccggaatcgtcgcgaccatgagagagggggtagtttctcccctaggaactacccccggcacacgcccatgccaccccagcaacaacagccaggcatataccagcctggaccttttccacgaccaccgccgccgccgccccctggccattttatggtgccacagccttttgtgccatatgttccgcactttgcataccctgctgatgtgcaaggctatcctttctatctcccacctatggagcagttccagaacatgcaccttgtccggccacaaatgcagccattatgggttccccaggatcaacagaatcttcaagaggatatccgcacgcagatagaattctattttagcactaataatctgtgccatgacacattcttgaggagacaaatggatgatcagggatgggtacacattgacgtaatcacaaaatttaaccgggaagctattatagttcttgtactatgtttacagcatcctgtactcatgtttccttcttttttttggcaaattgttctgaggttacctatgaggagatttacaaacttggtagacaccaactatatactagatgctgttcgtggctcagagctagtagaagtgcagatgatgtatttgtattctcaattgacttgtatttgcattttactacaattgcatatttacagggaaataccgtccgaaggcgcaataattgggcagaatggttactcctttaagcccccatcctgcaaatcaggagttggaaacaaacagttagcatggcctacaagaagcgagaggaaggacagtaacacgtgcctgcagtgtgaagcaaccacactgttggtcaatggataa</cdnaseq> |
| Protein Sequence |
<aaseq>MSPAAGGAAPTQLPPPPVAASPSPPPLAAAAAAAAIAGPEGDRA PPPQGNRRDPAGSAEGADPGNAAARKTAWNVPAPPLAAAAAAGAGVGVPGGGIMGGGP GSWPALAESAAARGSWPKSASSDSLKSLSDGSAPSASEDLIVPSVQPHPVANPISGGS NPTSSPPPPNATVVVTSEQNGNTDQSNPVRHSSGGHCAGSNSSRDGNTSDGGDGSWND GGLGSGSGSNSSYGHGNSTNGAGGANMNNIIHSSGTSSSANDSSRRISGNNNWNNNGR SAGSNHNAAGSGDGSNRNLWNNNGRNGGGSSNGFVGRGGHRNRRDHERGGSFSPRNYP RHTPMPPQQQQPGIYQPGPFPRPPPPPPPGHFMVPQPFVPYVPHFAYPADVQGYPFYL PPMEQFQNMHLVRPQMQPLWVPQDQQNLQEDIRTQIEFYFSTNNLCHDTFLRRQMDDQ GWVHIDVITKFNREAIIVLVLCLQHPVLMFPSFFWQIVLRLPMRRFTNLVDTNYILDA VRGSELVEVQMMYLYSQLTCICILLQLHIYREIPSEGAIIGQNGYSFKPPSCKSGVGN KQLAWPTRSERKDSNTCLQCEATTLLVNG</aaseq> |
| Gene Sequence |
<dnaseqindica>5309..5323#4721..4806#3623..3755#3480..3557#2605..2691#1567..1657#1333..1483#525..1254#1..417#atgtcgccggccgctggtggcgccgccccgacccagctgccgccgccaccggttgctgcctccccctccccccctccgctggctgcggcggcggcggcggcggcgatcgcggggcccgagggcgaccgcgcgccgccgccgcaggggaatcggcgggatccggctggttccgcggagggcgccgatccgggcaatgcggcggcgaggaagacggcgtggaacgtgccggcgccgcccctcgccgcggcggcggctgcgggggcgggggtgggggtccccggcggcggcatcatggggggcgggcccgggtcgtggccggcgctcgcggagtccgcggcggcgcgagggtcgtggcccaagtcggcgtcgtcggactccctcaagtcgctctccgatggctccgccccctccgcatcggtattgaatctcgcgatcaactcgttaaattccgatgcggtagcatctagagaatcatctctcgctttagtttatccagtgtttgatgaatctattgatgcgatcaggaggatttgattgtgccatctgtgcaaccgcatccagttgctaatccgatctccggtggctcaaaccctacctcttcgcccccacctcccaatgctaccgtggtggttacctcggaacagaacggcaacacagaccagtcaaatccagttcggcatagcagcggtggccactgtgctggtagtaatagcagccgtgatggaaacactagcgatggtggtgatgggagctggaacgacggaggccttggtagtggaagcggttccaacagcagctatggacacggcaacagcaccaacggtgctggtggtgcaaatatgaacaatatcatccatagcagtggcaccagtagcagtgccaatgacagcagcaggaggatatctggcaataacaactggaacaataacggacgcagtgctggcagcaaccataatgctgctggcagtggtgatgggagcaacagaaacctctggaacaacaatggccgaaatggtggtggcagtagcaatggttttgttggtcgtggtggtcaccggaatcgtcgcgaccatgagagagggggtagtttctcccctaggaactacccccggcacacgcccatgccaccccagcaacaacagccaggcatataccagcctggaccttttccacgaccaccgccgccgccgccccctggccattttatggtgccacagccttttgtgccatatgttccgcactttgcataccctggtgagtgtgaaatttgttaacttctttgtacaacttctcatccttttgttgtaatgtggttagtgtgatgatgtgcagctgatgtgcaaggctatcctttctatctcccacctatggagcagttccagaacatgcaccttgtccggccacaaatgcagccattatgggttccccaggatcaacagaatcttcaagaggatatccgcacgcagatagaattctattttaggtagtgaatgtgttatttttctttaggtattcatgttgtttcctggtgctaattgttttttcttttcatctattttgtggtagcactaataatctgtgccatgacacattcttgaggagacaaatggatgatcagggatgggtacacattgacgtaatcacaaaatttaaccgggttagttttttccattatgattttattcttgttccattgttatataaggttgtattgttaatgtgatttcttattttacatcccttggccctcacacactgaatggcgctgtgtaagataatagatagtgtttgtttatgcatagcttcagatgaatgagatcatagctaatgtttgtttatgcatagcttcaaaactgcctgataattctgctgttagaatgtcagatagaaaattgttattactgcacaactctaatccctatggtttagagtgtagttcttgtaggcatattatttctcgtttctgcctgattcatggcgttgctgctagggagggtggttctcacttatcaatgttcacaagatatgtgaacatataaaatgagaatagtcatatgcttggtgcaaggcaataaaagatacctctatatactgcaaagtagaatgtattaatgttacaattctcgctcgtagttatagataaaaaaaatacatttggagtttcttaaaggaaaaactcaaattatttctctggtagacttacatgggttgctaagttacaccaaactcaatgtctttttcttccagaacgacttatttgtatttttttaatgatccattcagccaatcaatccaccaaaatgttgattgcagttcataacagcattgcatctgttcttgtagttggattgtaatttgtttttttttagtaaacagtttcatctatttaacaggcagtatgatagtatcccagcggttatatctcctttattatcctggataaaagaagttcatttttccttttaaagatgcatttctgttagaagattatagtatctctactagtaacttgctgcattttgtcctctataaatttgtaagatgaatgttcaatatgtacccttgcttcaccaaaatgtatccaatacactgtattgtttgcaggaagctattatagttcttgtactatgtttacagcatcctgtactcatgtttccttcttttttttggcaaattgttctgaggttacctgtaagtattgctgaaaggtatttgaggggtaataggctaatttctttggcattacccagcatattacagagggcgattgtgcaccatcgccacaccttgtgcctatggattgttgcatgtgcagtatctgctagcagctaacaatagtcagacaataattattgtctagttttgaaatgtttatattgctaagtatgatacctgcatagagtgaaaagtgaaaacatccttttgagacattggtgttgtattggaagttacatgaacaatatgcaaatagctccatattttaacaagtgaaaatggggatgtagatatataggattaaatggcattgatgtatcaggatggataggcttgatagctgtgactttctagtttctacagtggattgcattacagatacttccacttggggtgtgctttaactcatcatacatgacctccaattatgaatgcttgcacagtttcagctgttggaaatatatcgctgtttatataatatacaacaattggatatataatatacaacaattggatcttgtgactaggcagctgatcatgttttgatgccggtgcaaaaacaaaaatgcaccttgtatttcttttcttcttttgtagtaattattctgtacacatacttttcaactgatctacaatgtcctagtgtggtacccttgtattctttggcaccaactattttatcaatgtatggtactatgtgcaatgatccagtatagttaccacagttcgattcatcacaactttcttgcgttttttttttgtagatgaggagatttacaaacttggtagacaccaactatatactagatgctgttcgtggctcagagctagtagaagtgcaggtttgtttcacacacctgcaatgttggatatacagtttgtgttttcactgtttcatcaaattaagatgatgtatttgtattctcaattgacttgtatttgcattttactacaattgcatatttacagggaaataccgtccgaaggcgcaataattgggcagaatggttactcctttaagcccccatcctgcaaatcaggttagttccaccatacacacgctggcttcttcttcatggcactattttgtctgtatacacacttgtggaaattaggtactaactgaactatttcttcaggccaaatgcagattgagatggtgatatacggctggttgctatcctggatagccgatttgaaagggttgctcatttgatcacggacttaggtttcgtgatgaatcatggttgtacagtgggtcatttcggagtaagaagattttgtttgtttaggtcagacttgttggctgctcggaaaggcatattaaaggcattgcaagggggcaaatacaccaaaaataggaaacaatttccagaatataaatccttttttggtctgtatagtttttgtcggataaagaaacggtcggtgccttttcatcataagacggtgccctctttactgttgtggatgttcggtggggtttattttgggattaccccgtcattttttggttgcatgcacgatgattcaagctactgaagcagcgaggtttaccagaatattttttccttttcaccttttgttttctttgaatccccaacatgctttgtgaaaagattatgcgattgctctccttgatgacatggtcgtcaagttgtattggccaagagatacaggggttttttttgtagaatcagttatggtttatttggaattttggcctaatccggaagctttgggtgattcattttagaacacatcgatttgtattgtccaagggatacaggggttttgtagaatcaattatggttgagttggagatttggcctaatccagaagttaaggatgataccaaaggcacccaatctgaatcctacaaggtttttcttcctcccctttcaccagatggactctcttttgcagggcgggtgaaatacaagcatatacccatctgctttcacgaattcttcagaattttctctctgattctgttgaaattcaggagttggaaacaaacagttagcatggcctacaagaagcgagaggaaggacagtaacacgtgcctgcagtgtgaagcaaccacactggtaggttggtggcaaagcgaagctcgtgtgactggctgtggctgtgggctctttgtcatgtgcccgacctcaccaacccaattaaacaaggccccgtctcctcgtcgcccaaggttttttggtttctgcctttacgaatttaacaaataatggtctcgttgcttggttggttacttttgcctggtgattcctgcctgcctcattttcgaatttaacaaatgatggtctcgttgcttggttggttacctttgcctggtgattcctgcctgcctcattggttaccggggccggccgtgcgcttgcttggccacgagatgatggaaccacagggagatagatgccccccgtacctggataagacgacaagacgtgacaatttttctgtcgaatttgttcttcggcccgcacccacccttttaatttaattgtctaccccagtcttaatcaagagctttactttttcctagtactagtaattgtattgtattgttactatgtttagttggtcaatggataa</dnaseqindica> 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