Os09g0541000

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Annotated Information

Function

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Expression

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Evolution

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Structured Information

Gene Name

Os09g0541000

Description

Similar to Plasma membrane intrinsic protein (Aquaporin)

Version

NM_001070347.1 GI:115480436 GeneID:4347729

Length

1266 bp

Definition

Oryza sativa Japonica Group Os09g0541000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22141777..22143042

Sequence Coding Region

22141808..22142236,22142336..22142557,22142659..22142781

Expression

GEO Profiles:Os09g0541000

Genome Context

<gbrowseImage1> name=NC_008402:22141777..22143042 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22141777..22143042 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgaaggaggaggtggccgtggagacggtggagggcggagcggcggcggcgaaggcgccgtactgggacccgccgccggcgccgctgctggacacgagcgagctgggtaagtggtcgctgtaccgtgccctcatcgcggagttcatggcgacgctcatcttcctctacgtgagcatcgccaccgtgatcgggtacaagaaccagagggccaccgtcgacgcgtgcaccggcgtcggctacctcggcgtggcgtggtcgttcggtgccaccatattcgtcctcgtctactgcaccggcggcgtctccggcgggcacatcaacccggcggtgacgctgggcctcttcttcgggcggaagctgtcgctcgtccgcaccgtgctgtacgtcgtggcgcagtgcctcggcgccatcgccggcgccggcatcgtcggcacgttcatcctcgtctacaccgtcttctccgccaccgaccccaagcgcaccgcccgcgactccttcatccccgtactcgtgccgctgccgatcgggttcgcggtgttcgtcgtgcacctggcgacgattccgatcaccggcacgggcatcaacccggcgaggagcctcggcgccgccgtgctgtacaaccagcacgcagcttggaaagaccactggatcttctgggtggggccggtgatcggggcgttcttggcggcggcgtaccacaagctggtgctgcgcggcgaggccgccaaggcgctcagctcgttcaggagcaccagcgtgacggcgtga</cdnaseq>

Protein Sequence

<aaseq>MASKEEVAVETVEGGAAAAKAPYWDPPPAPLLDTSELGKWSLYR ALIAEFMATLIFLYVSIATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGG VSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVGTFILVYTVFSATDP KRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHW IFWVGPVIGAFLAAAYHKLVLRGEAAKALSSFRSTSVTA</aaseq>

Gene Sequence

<dnaseqindica>32..460#560..781#883..1005#ttcgtggtgataaggagtaggagagaaggccatggcgtcgaaggaggaggtggccgtggagacggtggagggcggagcggcggcggcgaaggcgccgtactgggacccgccgccggcgccgctgctggacacgagcgagctgggtaagtggtcgctgtaccgtgccctcatcgcggagttcatggcgacgctcatcttcctctacgtgagcatcgccaccgtgatcgggtacaagaaccagagggccaccgtcgacgcgtgcaccggcgtcggctacctcggcgtggcgtggtcgttcggtgccaccatattcgtcctcgtctactgcaccggcggcgtctccggcgggcacatcaacccggcggtgacgctgggcctcttcttcgggcggaagctgtcgctcgtccgcaccgtgctgtacgtcgtggcgcagtgcctcggcgccatcgccggcgccggcatcgtcaaggggatcatgaagcgcccctacgacgcgctcggcggcggcgccaacaccgtcagcgacggctactccgccgccggcgccctcggcgccgagatcgtcggcacgttcatcctcgtctacaccgtcttctccgccaccgaccccaagcgcaccgcccgcgactccttcatccccgtactcgtgccgctgccgatcgggttcgcggtgttcgtcgtgcacctggcgacgattccgatcaccggcacgggcatcaacccggcgaggagcctcggcgccgccgtgctgtacaaccagcacgcagcttggaaagaccacgtgagagagaacgaacaaaattaaattcattcgaatagattcacttcttaaaactttttcttaatcaatcgactagtaattaatttgatgaattttggcagtggatcttctgggtggggccggtgatcggggcgttcttggcggcggcgtaccacaagctggtgctgcgcggcgaggccgccaaggcgctcagctcgttcaggagcaccagcgtgacggcgtgaggaagacgacgatgttcatttgatacgagagatcgatcagctgcttgattaattgttcttgatttcgttgttcaatttacaatctacgactatggacgatcatgcatatgatatgatcgatgcatgcgtctgttgtcagttttatttgggactttcagtgtgagagtgtgaatggttgtaaaataagtggagtgcctgtatgtatctgtatgcatgcacggcacggtacgcgtgtttatggatgatgctttgttacgtagc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0541000, RefSeq:Os09g0541000