Os05g0493800

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Revision as of 10:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0493800| Description = Similar to MtN21 nodulin protein-like| Version = NM_001062456.1 GI:115464642 GeneID:4339187| Length = 2285 bp| Defi...")
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Gene Name

Os05g0493800

Description

Similar to MtN21 nodulin protein-like

Version

NM_001062456.1 GI:115464642 GeneID:4339187

Length

2285 bp

Definition

Oryza sativa Japonica Group Os05g0493800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24301788..24304072

Sequence Coding Region

24301819..24302015,24302179..24302241,24302634..24302750,24302847..24303264,24303347..24303766

Expression

GEO Profiles:Os05g0493800

Genome Context

<gbrowseImage1> name=NC_008398:24301788..24304072 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24301788..24304072 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttcctgctgcggcggtttcatggagaaggccaagccctacttcgccatgatctgccttcagttcggctacgccggcatgaacgtgatcaccaaggtctcactcaaccatggcatgagccactacgtactcgtcgtgtaccgccacgccttcgccaccatctccattgctcccttcgcgctgatcctcgagaggaaggtgaggcccaagatgacgtggtcgatcttcttccaaatcttcatcctggcgctactcggaccggtgatcgaccagaacttctactacgccggcctgaagttcaccggcccgaccttcgcctgcgccatgagcaacatcctgccggccatgaccttcgtcatggctgtcatcttcaggatggagaagctggagctgaagaaggtgaggtgccaggccaagatcgccgggacgctggtgacggtggccggcgcgatgctgatgacgctgtacaagggcccgctcatggagatggcgtggagccggcacgccggcgccggcgtggcggaggcccccgccgccgccgccgccgccatctccggcagggactggttcctcggctcgatgttcgtcatcgtcgcgacgctcgcgtgggcgtccctcttcatcctccagacgcacaccatcaagcagtactcggcgcagctgtcgctcaccaccctcatctgcctcgtcggcacgctccaggccgtcgtcgtcaccttcgccatggagcggcgccgcccctccgtctgggccatcggcttcgacatgaacctcctcgccgccgcctacgccggcatcgtgacgtcgagcatcgcgtactacgtgcagggcttggtgatccagaggacggggccggtgttcgcgtcggcgttcagcccgctgatgatgatcatcgtcgccgtcatgggctccttcatcctctccgagcagatctacctcggcggcgtcgtcggcgccgcgctcatcgtcgtcggcctctactccgtgctctggggcaagcacaaggagacccaggagaagcaggctgacaccaagctatcactgcccacttccaaaggcgccgccgccgctgcggaggcggaggagatcaccggcgccggagaagacgacggcgacggcgacgatgacgcggagcgcagcaagaaccaccgctcgagtggtggcgtgaggtcatcatcggactccaatggacatggagctagtgcggtttga</cdnaseq>

Protein Sequence

<aaseq>MASCCGGFMEKAKPYFAMICLQFGYAGMNVITKVSLNHGMSHYV LVVYRHAFATISIAPFALILERKVRPKMTWSIFFQIFILALLGPVIDQNFYYAGLKFT GPTFACAMSNILPAMTFVMAVIFRMEKLELKKVRCQAKIAGTLVTVAGAMLMTLYKGP LMEMAWSRHAGAGVAEAPAAAAAAISGRDWFLGSMFVIVATLAWASLFILQTHTIKQY SAQLSLTTLICLVGTLQAVVVTFAMERRRPSVWAIGFDMNLLAAAYAGIVTSSIAYYV QGLVIQRTGPVFASAFSPLMMIIVAVMGSFILSEQIYLGGVVGAALIVVGLYSVLWGK HKETQEKQADTKLSLPTSKGAAAAAEAEEITGAGEDDGDGDDDAERSKNHRSSGGVRS SSDSNGHGASAV</aaseq>

Gene Sequence

<dnaseqindica>32..228#392..454#847..963#1060..1477#1560..1979#cttcgagattaattaggaagctaagatcgccatggcttcctgctgcggcggtttcatggagaaggccaagccctacttcgccatgatctgccttcagttcggctacgccggcatgaacgtgatcaccaaggtctcactcaaccatggcatgagccactacgtactcgtcgtgtaccgccacgccttcgccaccatctccattgctcccttcgcgctgatcctcgagaggtatacaatccgttgttttaacgtgtactcgtatgtacccttattgtcggtttaagcttctggatgaactggtcggtgcacggacttgattgttattgtacattgatcatatgatgtgtaacggaagctgacgtgtcgctacaaattaatggcattatgacaggaaggtgaggcccaagatgacgtggtcgatcttcttccaaatcttcatcctggcgctactcgggttagtgagacttgtctacttacagcgtaattacactataattatactataattatattttaaagatttttaataaaagaaatcttatacgcaaactccattgcgtatgatcttgcagcgcttttaataaaaaaaatctaatgaaggattgattatgtttagtgagacttagtctagttataatgtagttacactacaatttgtaataagaaaatcttgcagcttatgttttaaaagatagtctcatatgcaaactctaatggaggattgattatgtttctgccaaagaaaaggaaatatttgccaatgaaaatttgcaaaggaaaaaaggaagcatagcttgtctctggaatgacacattggattcacctgttcttggtttgttggtgcagaccggtgatcgaccagaacttctactacgccggcctgaagttcaccggcccgaccttcgcctgcgccatgagcaacatcctgccggccatgaccttcgtcatggctgtcatcttcaggttcgttctccaccacgtacgatctctctcaatgcatccatggcgatcgagagctagatgtgagctggtttgacgttaatgcatggtgttcgacaggatggagaagctggagctgaagaaggtgaggtgccaggccaagatcgccgggacgctggtgacggtggccggcgcgatgctgatgacgctgtacaagggcccgctcatggagatggcgtggagccggcacgccggcgccggcgtggcggaggcccccgccgccgccgccgccgccatctccggcagggactggttcctcggctcgatgttcgtcatcgtcgcgacgctcgcgtgggcgtccctcttcatcctccagacgcacaccatcaagcagtactcggcgcagctgtcgctcaccaccctcatctgcctcgtcggcacgctccaggccgtcgtcgtcaccttcgccatggagcggcgccgcccctccgtctgggccatcggcttcgacatgaacctcctcgccgccgcctacgccgtcagtaccatcctctcccatctccggcgccggcgatcgctagcacgcactctgacgttcttggtttcttggacacatgcagggcatcgtgacgtcgagcatcgcgtactacgtgcagggcttggtgatccagaggacggggccggtgttcgcgtcggcgttcagcccgctgatgatgatcatcgtcgccgtcatgggctccttcatcctctccgagcagatctacctcggcggcgtcgtcggcgccgcgctcatcgtcgtcggcctctactccgtgctctggggcaagcacaaggagacccaggagaagcaggctgacaccaagctatcactgcccacttccaaaggcgccgccgccgctgcggaggcggaggagatcaccggcgccggagaagacgacggcgacggcgacgatgacgcggagcgcagcaagaaccaccgctcgagtggtggcgtgaggtcatcatcggactccaatggacatggagctagtgcggtttgatggacacctaactccccaataatttggttgcggccgtcgacgcgtcgacgcgacggcgaccgtcgccatcgccatgcgtgcgtcgacgtcgatctctccgctttaagatatccgaactgttcgtctacggcgcgtgcactacgacgacgatggcactaagggctcgttaaatttggaaatggaggtttttgtttggtaggaaatttttgatgaacttttactgtgttaatttccctgcaaaatgtaagcgtttgtcacctcgtcagatgttcagaatggtggcatgcatatctctgcttttttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0493800, RefSeq:Os05g0493800