Os09g0548200
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os09g0548200 |
|---|---|
| Description |
Peptidoglycan-binding LysM domain containing protein |
| Version |
NM_001070388.1 GI:115480518 GeneID:4347773 |
| Length |
2780 bp |
| Definition |
Oryza sativa Japonica Group Os09g0548200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:22509120..22511899 |
| Sequence Coding Region |
22509169..22509841,22511019..22511136,22511249..22511442,22511542..22511678 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:22509120..22511899 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:22509120..22511899 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgacagcagcaatggcgccgccgcagctcgtgtccgtgctggtggcgctcctctgcgtggcggcggcgtcgccggcgggggtgggggcggcgcggttcgtgtgcaacgcgacggcgccgcgggcgtccacgtgccaggcgctggtggcgtacgcgccgcccaacgccaccacgctcgccgcggtgcgggcgctcttccagctccgctcccaccgcgcgctgctggcgtccaacggcctgccgctctccacgccgccctccgcgccggcgccctcgccgctccgcgtccgcctcccctgcctctgctccggtggcgccggcgccaccttccagcgccccacctaccgcatccgcgccggcgacaccctcgacgccatcgccaggggtgtcttcgccggcctcgtcacctaccaggacatcgccgccgccaacaacgtctccgaccccaacaagatcgccgtcggccaggagctctggatccccgtgccctgcagctgcgaccccgtcgccggccagcccgtcgtccactacacctacgtcgtgccgccgggggcctccgtggccgccattgctcaggacttcgccaccacggaggccaccgtcctcgccttgaaccggatgcccgacgccaagagccttctcgccggccaggttcttgatgtgccgctccgagcctgctcctctgccattagcagtacagctatagaccgcaacctccttgttcccaatggaagttacattctgactgccaacaactgcatcatgtgtggctgcagctcctacacttggcagctggattgtcaaccaacacaaggaataagctcatcgttctgcccagcttcaaaatgtggagatatgttcctcgggaacacgaccacatcgccgacatcatcttgcgaaagcacggcgtgctcgtatgcagggtacaccaatagcacatctttcaccatccttgccaatcttaccaccagttctacatgcaatgctgctgcgatgtctccaatggcgcagcaggctcactcatcggcgttcaggctggcatcaacgtggttgagatggactgagctgatcgtttgtcttcatgtcattttcttgtgtgtaagcttcctcaatcatgtttga</cdnaseq> |
| Protein Sequence |
<aaseq>MTAAMAPPQLVSVLVALLCVAAASPAGVGAARFVCNATAPRAST CQALVAYAPPNATTLAAVRALFQLRSHRALLASNGLPLSTPPSAPAPSPLRVRLPCLC SGGAGATFQRPTYRIRAGDTLDAIARGVFAGLVTYQDIAAANNVSDPNKIAVGQELWI PVPCSCDPVAGQPVVHYTYVVPPGASVAAIAQDFATTEATVLALNRMPDAKSLLAGQV LDVPLRACSSAISSTAIDRNLLVPNGSYILTANNCIMCGCSSYTWQLDCQPTQGISSS FCPASKCGDMFLGNTTTSPTSSCESTACSYAGYTNSTSFTILANLTTSSTCNAAAMSP MAQQAHSSAFRLASTWLRWTELIVCLHVIFLCVSFLNHV</aaseq> |
| Gene Sequence |
<dnaseqindica>50..722#1900..2017#2130..2323#2423..2559#acactgtaacacacacacacacactctctactctctctaagctaagctaatgacagcagcaatggcgccgccgcagctcgtgtccgtgctggtggcgctcctctgcgtggcggcggcgtcgccggcgggggtgggggcggcgcggttcgtgtgcaacgcgacggcgccgcgggcgtccacgtgccaggcgctggtggcgtacgcgccgcccaacgccaccacgctcgccgcggtgcgggcgctcttccagctccgctcccaccgcgcgctgctggcgtccaacggcctgccgctctccacgccgccctccgcgccggcgccctcgccgctccgcgtccgcctcccctgcctctgctccggtggcgccggcgccaccttccagcgccccacctaccgcatccgcgccggcgacaccctcgacgccatcgccaggggtgtcttcgccggcctcgtcacctaccaggacatcgccgccgccaacaacgtctccgaccccaacaagatcgccgtcggccaggagctctggatccccgtgccctgcagctgcgaccccgtcgccggccagcccgtcgtccactacacctacgtcgtgccgccgggggcctccgtggccgccattgctcaggacttcgccaccacggaggccaccgtcctcgccttgaaccggatgcccgacgccaagagccttctcgccggccaggttcttgatgtgccgctccgaggtactccaggacaaaaggagatgaaaaaaaaaacaactcttattactatttattttctctatctccttttgatttgtactagtagaaggagctagtacttcacctaaaaatgtcttctaaaaaaacaacttttttaaaaagaaaaaaatcttctaaaagttgtttcatttgaaatgcttttgagtatcttgctgccattgcctccaagatactgtatctagtgaagctcacaacctttttggcacatccttttgtctttgggaactttttgtgctcctttgttactagtagtacttgtttgcattgtgtcttttactaactcttattggcgcatccaacaaagtacatgttgcaatagctggtgtgcaagctgcatttatacaatgtttttttttttctgaatttctaggttctttgtgctggatgagatagaaatgcttagctgtgggctgaacacaaagctctatctctttttgctcctctttgtacattctagtactaatcttaccccacaacaaccaatgttcagaacatgcttttctcatcatttgccttgagcccttgaaaaggtgtgcttatggatgggcataataaaaagatgcagtaacatttgacactagttactggagtactagtatttcagtcctccaacttgtttcctgttgcagcttttgctagcttataggagtagcaagctgcagcgtttatcatcccttaggcttgtattaatcgattataaaggactgggtccttgcctgtactgtaggaacttgaatgtacctgtagtatcctagtaggagtaatagtagaaaacaatgtaccgacacagtgacatctccactgaactactgttaagtggtcatagttctggtcttctgaatatgccttgctgcatattggatctgaagtttagaacatttcccattcgacatatgtaacttacccgtaagtcaccaagttaatttgttgttgtcataatcgtggtaatgtcagtattgtgcaagctaaaatgcccactgccaatttttttttgatgctactgtcaactgtctagtacttcctttctaattggaattttaatagacttagaatttcagagatataatcccttttcatctcattgtcatacgttcactcttaataatgtttgggactaacaggtcacatatatgtgcagcctgctcctctgccattagcagtacagctatagaccgcaacctccttgttcccaatggaagttacattctgactgccaacaactgcatcatgtgtggctgcagctcctacacttggcagtgagtgttcactctactaaagatcatgcttactgttattggcaaatccgcaaatgagtatgtgtcgcccgattctaactcccaactcccgacaaatctctgaattattcaggctggattgtcaaccaacacaaggaataagctcatcgttctgcccagcttcaaaatgtggagatatgttcctcgggaacacgaccacatcgccgacatcatcttgcgaaagcacggcgtgctcgtatgcagggtacaccaatagcacatctttcaccatccttgccaatcttaccaccagttctacatgcaatggtgagtgcagctcagatataacacaaaacaaatactaactagtaccatttttgtttgcaatgagtaacatattgaccccttgttggttgtaccctgcagctgctgcgatgtctccaatggcgcagcaggctcactcatcggcgttcaggctggcatcaacgtggttgagatggactgagctgatcgtttgtcttcatgtcattttcttgtgtgtaagcttcctcaatcatgtttgaggagcatttccattcttgttttctcagtgcctggactactgatttcgtggtctcatgttgtgagtaatctgggcagtgtaagtgtggacttaataagtagctgattggacgtgtaagtgtggatggacaccaggggaacacatgtttttgtgttagaatgtagatcaggagacatttgtactgtcgaactcttgcaaaggtagttctatgattttgctttt</dnaseqindica> |
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