Os05g0494100

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Revision as of 10:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0494100| Description = Histone-fold domain containing protein| Version = NM_001062458.1 GI:115464646 GeneID:4339189| Length = 4323 bp| Def...")
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Gene Name

Os05g0494100

Description

Histone-fold domain containing protein

Version

NM_001062458.1 GI:115464646 GeneID:4339189

Length

4323 bp

Definition

Oryza sativa Japonica Group Os05g0494100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24323124..24327446

Sequence Coding Region

24323237..24323269,24324557..24324629,24325892..24325985,24326274..24326387,24326471..24326519
,24326714..24327223

Expression

GEO Profiles:Os05g0494100

Genome Context

<gbrowseImage1> name=NC_008398:24323124..24327446 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24323124..24327446 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggaagaagctggacacccgcttccccgcgcctcggattaagaaaatcatgcaagcagatgaagatgttggcaagattgctttagctgtacctgttctagtgtcaaaagcattggaattatttctgcaagacttgtgtaataggacatatgacattacagtgcaaagaggggtcaagactctgagttcttcccatttgaaacagtgcatacatagttataatgtttacgatttcttgagggatgtcgtcagtaaagttccagacatgggtacatctgatgctggtgttgatgataaacttggcaaaaggaggaaaactgctgaagatgacagtgaagaggaatcaaagcggacaagaaatgaggcagcaagccagacaagcactggtagagggcgtgggaggggtcggggaagaggccgacgtggtgggcgtgtgtctgagagggagattatttccgcttacgaaaaatttgaggagaaccatgagtttcctccaggtcaatttagcaagccttctcagctgaaggtagatgtttcagttgatggtacagatgcaattgaaacaaaggaggctaccccattaagcaacgcaagagcttctctaaggaacattgacttaaacatagagcttactgactatgatgatgagggttcagctccactggaggtccagcctccagctccggcagcaggtgtggttacaacctcttcaggaccacttgtttcggaggtgaacgaagaggcgaagaccaaagactttctaggatggcaattgcctgagctgaccaagatggccatggaccctgttcagtttgccttgtcttcaaaccataggttagaggaggatgaggattatgacaacgaagaatga</cdnaseq>

Protein Sequence

<aaseq>MRKKLDTRFPAPRIKKIMQADEDVGKIALAVPVLVSKALELFLQ DLCNRTYDITVQRGVKTLSSSHLKQCIHSYNVYDFLRDVVSKVPDMGTSDAGVDDKLG KRRKTAEDDSEEESKRTRNEAASQTSTGRGRGRGRGRGRRGGRVSEREIISAYEKFEE NHEFPPGQFSKPSQLKVDVSVDGTDAIETKEATPLSNARASLRNIDLNIELTDYDDEG SAPLEVQPPAPAAGVVTTSSGPLVSEVNEEAKTKDFLGWQLPELTKMAMDPVQFALSS NHRLEEDEDYDNEE</aaseq>

Gene Sequence

<dnaseqindica>114..146#1434..1506#2769..2862#3151..3264#3348..3396#3591..4100#gatgtcctcctccgctccggccccctcatcgatcgagctcgcagccgccgtgttccccgccggggaaggtcgtccttgccgttgggtggtgttcccggcgctggattgacgccatgaggaagaagctggacacccgcttccccgcggtatggttcatatatgcgcggattttttttttcagattagaaattgttgttcaggtgtagatcctgcatgcgtgtatatagattctgcgatcgtgattggtatgtttatttttttcacttttgcctgagatgtgtttgttgcatgcacgcttgttttcggtggttaggttttgctaacaatttgatgcaatgaaattatggtgcatgtcttgcattttatctcccttgttaggcttcgcccatccacatattaggaattattttttgttgtaatttgccggttattttctatgtttgtttgcgagcatgatatatatttttattttgttttaacggtatctttagtgagataagtaatgaaattgcggttttgtgtgggtgtgattctgtatgaaactggcttattcgatacacatatccagaattctggagcctgattggtaattatgatgtgaggtagccagtgagtatttggggattcctaaatccagtactcgtacatttgtcatgtatgaggatgcctgatgtgagaaattttggtttaatttgctgcttatttgcataatttgtaataatagactctgttccatgtggtcccacctccaactgtgatcattaaataaggttatgctcctgagcttcatgggaaaaattagttgcccatatgcattaacattttactaaataatacattatcatgatttgttcaataatacgtcagtctaatcatcactattaatagtaaagaaacgtcaatgtgtgttttacagttctaatgctagtacggaccaccaatcatgtacctcttgatccgaattagatgcttagatccatatatttgatgtaatgtgcatttttccttgcatggatgttccctcattttgttaaagacacatggagtccttaaatagaataaaagtgcactatttatccttttggcctctgcactgtagcaaaatggtatcatgtagaattctactacttgctgcgggtctgctgtacaacaagttgtagctaaatccttatatgcttaaagccatgcattctgaggagatgctttcttaattaacctttgctcttacaaggacatgcagaatcatttctttatatatgttagggctaatgcttataatctcatttaacatgcccttaaggttgacatggtcggagctctttagtatatgttagttgtaattataaaaattgcatgaatcagattcttttattgttaccagtgctctttcagacaatattcttattttgtttgatgtctgtcatgtgttgcagcctcggattaagaaaatcatgcaagcagatgaagatgttggcaagattgctttagctgtacctgttctagtgtgtgagttttccactctgtttaatcttccttttattttattatatagctatttaactctcagtaacttattagtattcggtttagaggctcataattattttcgctacaaactgcactcctttctgccactaagagttaagtagcttatattttagaggccaaaacatatgagccttggagtctatgtaacaggaaatcatgttctgaatgataatcgatcttttcggtttctagattacaaatcatactgcctgcaaagcattattgattgtattagggaagacatagatcaaagctggcaattattgttgattaagggggaggggggcaggcttactaccaaagtatgttaggtcttactttgggctgttgtaatattgaaatcaagtgcatttgtacatgtactgtagacttactccctgtgtcattcacaccatccttaatcatgtaagcccattctccttcaaatttcacattgcatgtcaggtgcactatcaccaccacatctttattttggattcatctctagcgacctagtctacatctctgccatattagaatcaaccgatcctgtatgagcctgcatggccatgttttctttattcccctgatatccacctcgcttttttttttttgcgtgagtcatggtggcagaagttggggagcaatggggttggcattgttggttggataggaagagcagtcagatatgatgggggttgaatttggtgagggtgaggggaactagagaagggagattttggagaagagtgtaggagcgggagaaccggtgtccacatggtgcagcactaaagaacattgaatcaagtggatatattacagacaatttggctttatggcacggtatggattaagtaaaaacatttggatgtgagcccatatttagctttcctggaggaagataaaaaggtaaatgagtgaatgtaaaaaaggataaaatagctccatgcaaaataatatcattgcaaggtatagatttaatttatttgtttgcacttgggtgctttcttttctcttctgctagcatgcttctttgttttcttcgattgatatatctctaacgttggcataagattggcaccatccatagctaagcatattctgcactttgacacgttggcaagcatattttccgtttccatctgatttgatttaacttattatgatttgttttattaatgtatgatgtgatctttcaggctttcactttacatatatttcattattgtccattgttgcagcaaaagcattggaattatttctgcaagacttgtgtaataggacatatgacattacagtgcaaagaggggtcaagactctgagttcttcccatttgtaagttttgttgacctttccatgttttttttttctgagtcaatggagctataggtggaatctaacgactctttattaggatgcctgagaacctttttttccttgtcattaggtttttgttaatcataggttgttctttcaagctatctactcgtcatgctcttttgcaagtttctgagttgtgtgctgttgtcataatctgttcctgtaccttgatcctagaatgcatttttaagcatgtgttgttgtcagatcatgaaatccagtattttgcctcctttttttcaggaaacagtgcatacatagttataatgtttacgatttcttgagggatgtcgtcagtaaagttccagacatgggtacatctgatgctggtgttgatgataaacttggcaaaaggaggtaaaaaccttttcatttaatagtgtctgatgttcaaatcaatttttattcagcaagctttaatgagtgctgaaattcatcaggaaaactgctgaagatgacagtgaagaggaatcaaagcggacaagaaatgttagtttctccattatctttacctttatgtggatgttgcacatttcacaatttctgtcccttttgcattcttagtattagtatttgtatcagcacttgaaagaattctttactccagtcattccgttcatacataattaaaacgttcacctttgattttcatctcatttgctaataaggttgtatgcatgcaggaggcagcaagccagacaagcactggtagagggcgtgggaggggtcggggaagaggccgacgtggtgggcgtgtgtctgagagggagattatttccgcttacgaaaaatttgaggagaaccatgagtttcctccaggtcaatttagcaagccttctcagctgaaggtagatgtttcagttgatggtacagatgcaattgaaacaaaggaggctaccccattaagcaacgcaagagcttctctaaggaacattgacttaaacatagagcttactgactatgatgatgagggttcagctccactggaggtccagcctccagctccggcagcaggtgtggttacaacctcttcaggaccacttgtttcggaggtgaacgaagaggcgaagaccaaagactttctaggatggcaattgcctgagctgaccaagatggccatggaccctgttcagtttgccttgtcttcaaaccataggttagaggaggatgaggattatgacaacgaagaatgataacttgccccttttaggttaagaagctgatagatagacatgacttttgtctattgtacatccttgtagcccagcttaactctgtagctgatcttgtataatatgtgtacctgctgaagctgcagtagtttaggatgttacagaggtttatcgatcgatagctagcaactatgttgacagacagattcatcagttgtacatcctatctgatctccagtttatg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0494100, RefSeq:Os05g0494100