Os09g0556500
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os09g0556500 |
|---|---|
| Description |
Cysteinyl-tRNA synthetase, class Ia family protein |
| Version |
NM_001070434.1 GI:115480610 GeneID:4347821 |
| Length |
5760 bp |
| Definition |
Oryza sativa Japonica Group Os09g0556500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:22945844..22951603 |
| Sequence Coding Region |
22946258..22946491,22947301..22947402,22947536..22947736,22948626..22948751,22948826..22949107 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:22945844..22951603 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:22945844..22951603 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggcggcgaggcgcgccgctggcctcctccctctcctcctctcctcgccgtcgcgagctcgcctaccgcaccgccaagcgcttgccctgacccctcctctgcttcgcccccaccgcctctactcccactcccccaagccctcgtcgtccgccgcgttttccgccttcgcctccgcctcgaatggcgcgcctgcggggagagcccgggagctgcacctctacaacaccaagtcgcggaggaaggagctcttccagccccgggtgcccggcggggaggtcggcatgtacgtctgcggcgtcaccccctacgacgacagccacatcggccacgcccgcgcctacgtcgccttcgacgtcctctacaggtacttgcgttatttggaccataaagtgcgctatgttcggaattttactgacattgatgacaagataattgcaagagcaaatcaattgggagaagatccttttagcttaagcaaaaggtactctgatgacttcctatcagacatggctaatcttcattgtttaccaccatctgtggagcctcgcgtttcagaccacattgatcagattataaacatgattaaacagatcattgataatgattgtgcatatgcaattggcggggatgtttatttctctgttgaaaatttccctgaatatggggatttatctggtcgaaaattagatgataatagagctggtgaaagggttgctgttgatgagaggaagaagaacccagctgattttgctctttggaaggctgcaaaagatggggagccatcttgggatagcccttggggccctggaaggccaggatggcacatagaatgcagtgctatgagtgcacattacttgggccactctttcgacatacatggcggtggggaggacctgatctttccacaccatgaaaatgaaattgctcagagccgtgcagcatgttgtgacagcagcataaattactggatacacaatggctttgtcaatgtaaacagccagaaaatgtcaaaatcgctgggcaactttgtcactatacgcaaagttacggaactgtaccacccacttgctttgaggatgtttttacttggtacacactacaggtccccaatcaactataccatagaacagcttaatgttgcatcagacagactgtactacacttaccagacactacaagattgtgaagaaagttgtcaacagcaccaaagcaaggctggagatccattacctgttaatactacaaattgtatccagaagctccatgatgaatttgagacttcaatgtctgatgatcttcacacttcagtagcactggctgctatttctgagccattaaaagttatgaatgacttgctgcatactcgtaagggaaagaagcaggaaaaacggctggaatcactttctgctatggaagagaaaataaggatggtgctttctgtcctagggctactaccatcaagctattatgaggctctgcagcagctgcgggaaaaagcactaagaagagcttccatgacagaggagcaggtgcttcagaaaattgaagaaaggacttcagcaagaaaggcaaaacagtatgaaaaatccgatgaaatcagaaaagaattggctgctgttggaattgccctcatggacggtcctgacggaacaacttggaggccatctgtacctctttctgagcaaggggtggttgccagtacatga</cdnaseq> |
| Protein Sequence |
<aaseq>MAAARRAAGLLPLLLSSPSRARLPHRQALALTPPLLRPHRLYSH SPKPSSSAAFSAFASASNGAPAGRARELHLYNTKSRRKELFQPRVPGGEVGMYVCGVT PYDDSHIGHARAYVAFDVLYRYLRYLDHKVRYVRNFTDIDDKIIARANQLGEDPFSLS KRYSDDFLSDMANLHCLPPSVEPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVEN FPEYGDLSGRKLDDNRAGERVAVDERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWH IECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQSRAACCDSSINYWIHNGFVNVNS QKMSKSLGNFVTIRKVTELYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQT LQDCEESCQQHQSKAGDPLPVNTTNCIQKLHDEFETSMSDDLHTSVALAAISEPLKVM NDLLHTRKGKKQEKRLESLSAMEEKIRMVLSVLGLLPSSYYEALQQLREKALRRASMT EEQVLQKIEERTSARKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSVPLSEQGVV AST</aaseq> |
| Gene Sequence |
<dnaseqindica>5113..5346#4202..4303#3868..4068#2853..2978#2497..2778#2181..2351#1570..1731#1102..1165#66..433#aaagagggaaacgctatccgctaacccctcgcgccgtcgcgcttcctgtgcctcgaggaccgaccatggcggcggcgaggcgcgccgctggcctcctccctctcctcctctcctcgccgtcgcgagctcgcctaccgcaccgccaagcgcttgccctgacccctcctctgcttcgcccccaccgcctctactcccactcccccaagccctcgtcgtccgccgcgttttccgccttcgcctccgcctcgaatggcgcgcctgcggggagagcccgggagctgcacctctacaacaccaagtcgcggaggaaggagctcttccagccccgggtgcccggcggggaggtcggcatgtacgtctgcggcgtcaccccctacgacgacagccacatcggccacgcccgcgcctacgtcgccttcgacgtcctctacaggttccccctagcttcattcttctccggatttggtcccgttggtgaattgcgtgctctagtgatagtgatgttgactgtgctgtgcaattgactcacccaatgaggcgttatgtacttaattagttatatggatgtgttaacaaatttacaccgacttaatagcagtattctatacatggagaaatgaggagacatgtttatagcagtaagtgcattgcaaaattacacaatgtattatgtacattcacaatttgtttgtggacacactgtgagaaacattttgcgctctaaatagctcggtttaggatgttctgacattagaactacggcaaactgttatggtagttgcgtgcgaaatgatcctaactcttcccttagcaacagatctgccggaaacagaaaaggtactctgggaatggttgttaatttgttatgacgttaggaaaacaagccaattcactgttgcatctcaattagctaagcataacggagcaactcaaccatcatacccaggaacaatttcacaccctgaatccggccgtattcctttatggtctttttattcacattcagcacactcttaccatgttgtcttgtcttattttcctctcctgctagaaagtaccatacggtcatatgcttatctcatgtatcatgatatctggcaggtacttgcgttatttggaccataaagtgcgctatgttcggaattttactgacattgatgacaaggtgatttatgggtcaaatttattttcaaacaagtgatgctggtcctcattatctgaaagctaaatttaatgtaaacaaggaatcgtattgtatttatttatgctacagttattctacctgttcatcttctatagttagaagtcattatatccatacctttaatatggagaaaacgtgtcatgttgaccagttgaagtagagtagaccaaggtcatgtttgattcatattgcaaccaatgttgtgtttgtttcagattaatacctgaatttaacttcaaatttgtttcaatatatttacctccctcattatattaagctattttgcttgaaacctagaaagaaaatttatatgccaattgctaatctgcacaggatacctgagttgcacttctggaattctgtagataattgcaagagcaaatcaattgggagaagatccttttagcttaagcaaaaggtactctgatgacttcctatcagacatggctaatcttcattgtttaccaccatctgtggagcctcgcgtttcagaccacattgatcagattataaacatgattaaacaggtaaaatatgcatgcagtatggatcattggtgtttttcctatggtgcttaatttttattattatgcagttctttctgttgttctcctattaaatccaccatttcgtgtaataggcagtgaaagttccttattttgactactactatctagaaagagatgattcatcacacaccattaaatcgatacctgataatgtgttgctttctttcattgttaatgcatcataggatccgtgtacagagaacatccaattccaaattataaatttgcaatttgttattaagaatggtaagcatgtaaaatatgaaaatgattgttatcacatatatgcagttacgaacagttgcacctgattgacaatattgtgctgctattgaattctctgtgcaatataattgttttatgtgctgcccagcttgatgttttatctatgacatttcttggaacagatcattgataatgattgtgcatatgcaattggcggggatgtttatttctctgttgaaaatttccctgaatatggggatttatctggtcgaaaattagatgataatagagctggtgaaagggttgctgttgatgagaggaagaagaacccagctgattttgctctttggaaggtatgtcttgttctcaatttgtagatttcttctattttttgtgtatctattatgtactcttgttctatgaggaaattatttattttaatttcaagatttctttagagagttcagtttcaaattagctgattttatgtttctccaggctgcaaaagatggggagccatcttgggatagcccttggggccctggaaggccaggatggcacatagaatgcagtgctatgagtgcacattacttgggccactctttcgacatacatggcggtggggaggacctgatctttccacaccatgaaaatgaaattgctcagagccgtgcagcatgttgtgacagcagcataaattactggatacacaatggctttgtcaatgtaaacagccagaaaatgtcaaaatcgctgggcaactttgtcactatacgcaaagtaagactatataactttcattttttgtctaatcgttgcgctttatctttctcaaagatttccaactttctcaggttacggaactgtaccacccacttgctttgaggatgtttttacttggtacacactacaggtccccaatcaactataccatagaacagcttaatgttgcatcagacagactgtactacacttaccaggtatattatatcttcttatatccatgttagttttactaaccttatgctttatttctaccagcaaaacagtcgggccggaccttggggtggtggaaagatgatcctgagcctatttggcttctaggacttattcaggcctttgtactttggcttgccttgttaaaagcatctgtaaattcacattccaaaagtgtctatgctactgtaaaaactaaagagggaatgacactggaccttaaattggcatgcatgaattagtaacattacttaattttttttgtgagaacaagtgtaggttatgtttatgccaaggcatttacaagattaagatacacatttagtctatagatatattaattagatgaaccatatttttatcttttgaaagccaaatatatcattattcagatggcctgtgagtctgtgaccatgattcattccttaaccccatacaacttgccatctgcacttgtcttggctaagctgcagtactccaaataaaagtcggttcgcttaaattgaaatgtccattgaactttttttttttgtcttagctgattaaaaactggttgtgaattggcccgaaatttagaatcacagggtagcactgaattcatcttagtatagctatagttgcacgcatggtctgaccaggcagccctggcttttgctgcttctcaatctctagccaaagcaagatcacttaagttctggtttaacctttatgcctggagactgggaagctgcttcaatttgaatgactagtcagaacttttgagttttggtggcactgaaagggagatgctgcatttttgctgtttcttcaggagatatttcaatgccataactcttaattaaagagtttatgttttttgtttttaatttacagacactacaagattgtgaagaaagttgtcaacagcaccaaagcaaggctggagatccattacctgttaatactacaaattgtatccagaagctccatgatgaatttgagacttcaatgtctgatgatcttcacacttcagtagcactggctgctatttctgagccattaaaagttatgaatgacttgctgcatactcgtaaggtaaatcgaatgaaaaccttgtggagatacagttagtgactttcagggatctatgatttgatctgctcgcacgccacaagtaaaatactaaaatcatacctaatgtttcaatctttctctgatatttgagcagggaaagaagcaggaaaaacggctggaatcactttctgctatggaagagaaaataaggatggtgctttctgtcctagggctactaccatcaagctattatgaggtgagtgctatgtaacatagcctatgttttatcaactctgcccaagcagtttgaatatattttgttgtctgttgaagaacacactttgtttctttcctctgtgaatatgcattgtctgtcctgatacgatcacttgtatagcccatctcctgtattttgttgtcatagacattatggtattcaataaaccaaggttcagaaagtcacagtttactgtccggtgacaagttgagaaaaccacaccagcaggccgttttattaaaccttgtcttctagggtatattccacccccttaaactccacgcaatgtctactcaagtatccgacctcaaatatgcaaaatcaagatattcaaattttatatcttaaagaaccaaccagtacaacctgtttttttgctaacaaatggaactggattcctgccattttcttttcctgttttgttaagttcctgtttccagaaagtaaaaggcaatagagggtcaggtttggtttaccactcagccttattcaagtttgagcttcaactgtcatactgttgaatagccaggacaaatgtatctcttcaaaacttgtgtttcctttggaaatgaaagagatactgtggtaaccactgttataggtgcttaattaatgtatccgtgcccagaacagggcagctagcgcaatcaaattccaacacggtatttaagttgtactttccataggcactctgtttattataattctactctagtaaacatgactgtgattagccaaaccttttctccttcacacaccggacatcactaacaattctctgttctcaggctctgcagcagctgcgggaaaaagcactaagaagagcttccatgacagaggagcaggtgcttcagaaaattgaagaaaggacttcagcaagaaaggcaaaacagtatgaaaaatccgatgaaatcagaaaagaattggctgctgttggaattgccctcatggacggtcctgacggaacaacttggaggccatctgtacctctttctgagcaaggggtggttgccagtacatgatctgcgcaacaaaagctccggagtgaccatttcaaatacccatcaccacatgatccattcatgaggaactgcgatgttttccaggttttgagagaaaatcaagagaacatctgacgaatcagatggcctgcatgattcggtagagtggatatgagtttctgtctgacagaagatagccaagttttacagttttattacatcatacatattttgttctcgagtcagctgatatggtgcaacattttgcctatttttttacctgcagagtttactgcgcgatactttttagaaacatcagtacaaaatattgtgtgctgattcattttttgaatgataatacggtttggcatttcaaatggaagtaaagcaaatgtataagctattcggagcaaaatgttttcaccatcatttttc</dnaseqindica> 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