Os05g0494900

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Revision as of 10:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0494900| Description = Eggshell protein family protein| Version = NM_001062462.1 GI:115464654 GeneID:4339194| Length = 2005 bp| Definition...")
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Gene Name

Os05g0494900

Description

Eggshell protein family protein

Version

NM_001062462.1 GI:115464654 GeneID:4339194

Length

2005 bp

Definition

Oryza sativa Japonica Group Os05g0494900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24354990..24356994

Sequence Coding Region

24354991..24355167,24355359..24355827,24356386..24356611,24356657..24356813

Expression

GEO Profiles:Os05g0494900

Genome Context

<gbrowseImage1> name=NC_008398:24354990..24356994 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24354990..24356994 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>attcggcctagttctaggggaccatcatttctgacacttactctgaaaatttttgatggtgtccttgcacacaaggagataactgaaggtggaaaggatcataaagatattacaagcttgcttcgccttggaaaaacattgacaattgataatgaaacttttgaagatcttgatgaggttatagacaggtacgtggatccattggtaggccacctgaagagcatgcttttgtaccgcaaattcaagaaaggatcaaaaagtgaggttgatgagatgttaagggctgagaaatcagagaatcctatgagaatagtgtattgtttcggcatatctcatgagcatccaggcacatttattttatcttacattaggagtacaaatccacatcacgagtatattgggttatacccaaagggctttagatttcgtaagagggactttgacaatattgatcgcctagtgtcctatttccagaagcatattgacaaaccaccacctgatgctggtccatcaatgcgaaatgttgctgcaatggtgcctatgaaaagttcaggttggggtaatggtggtggcactggtggtggaaatgatggatggagaggagatggtaacaacgacagggatagacctttctctggaagatcaggaggcaggtttgattcaaggaacagctctggtggtcgtggacgtgggcgcgggcgtggtagaggtaactttggcagtgatgatggtggcggcggaggttggagtggtggcggtggcggtggcggcaacagtgggggatggactgacaatattggaagtggcggaggtggatggggcacaggtggtggttcctcgtgggctggtggtggcgacggaggttctggaggtggtggttctgatggcggcggcggtggctggggagcagcacccggtggatccaacgatgccccaggatggggcagcggcaaaaaggcggtcccagcacaggatggtggtagcgggtggggagcttccgccggcggcggcagcggtggctggaactag</cdnaseq>

Protein Sequence

<aaseq>IRPSSRGPSFLTLTLKIFDGVLAHKEITEGGKDHKDITSLLRLG KTLTIDNETFEDLDEVIDRYVDPLVGHLKSMLLYRKFKKGSKSEVDEMLRAEKSENPM RIVYCFGISHEHPGTFILSYIRSTNPHHEYIGLYPKGFRFRKRDFDNIDRLVSYFQKH IDKPPPDAGPSMRNVAAMVPMKSSGWGNGGGTGGGNDGWRGDGNNDRDRPFSGRSGGR FDSRNSSGGRGRGRGRGRGNFGSDDGGGGGWSGGGGGGGNSGGWTDNIGSGGGGWGTG GGSSWAGGGDGGSGGGGSDGGGGGWGAAPGGSNDAPGWGSGKKAVPAQDGGSGWGASA GGGSGGWN</aaseq>

Gene Sequence

<dnaseqindica>2..178#370..838#1397..1622#1668..1824#cattcggcctagttctaggggaccatcatttctgacacttactctgaaaatttttgatggtgtccttgcacacaaggagataactgaaggtggaaaggatcataaagatattacaagcttgcttcgccttggaaaaacattgacaattgataatgaaacttttgaagatcttgatgaggttggtacacatgatctctttttgttaccattgttactctagttcagtatcagtaagtggtgactcttttctgtgtttgttttgcacgccagcatggttctgtgtttctttttgcttgctgttatcacttagcagtagattgtcattctgttatttttggctaactactggtgctttattttggcaaataggttatagacaggtacgtggatccattggtaggccacctgaagagcatgcttttgtaccgcaaattcaagaaaggatcaaaaagtgaggttgatgagatgttaagggctgagaaatcagagaatcctatgagaatagtgtattgtttcggcatatctcatgagcatccaggcacatttattttatcttacattaggagtacaaatccacatcacgagtatattgggttatacccaaagggctttagatttcgtaagagggactttgacaatattgatcgcctagtgtcctatttccagaagcatattgacaaaccaccacctgatgctggtccatcaatgcgaaatgttgctgcaatggtgcctatgaaaagttcaggttggggtaatggtggtggcactggtggtggaaatgatggatggagaggagatggtaacaacgacagggatagacctttctctggaagatcaggttagtttttaacgcacttgcacaatgttatcatccagtttatttgcatggtattggcaggccagctttattatgactcaaagatgtttgcatacttaatatttgcatggaggactttaaattctatgggcctttagttcttcagttagcagaactatagatatgcttgtgtcagtttcagttggctgtagcattctttagggtgattcacgctctgtttgcaggcgccagtatcatgagaaccatttacttcaaaaaaaaattaaaaaatattgccctctgtatttgggattcctgattgtttatgtggttcaggtcaatttatttcatatttcaattttctacttcccattgcactttctttatcttgtgcttctccaatcattgatatcaccgatgaggttcccactaaacatgtgaaaagctaatcttgaggcaactataaaaccggccaagctactatttttggatagtaatatgatttgttacatttattgaattgttgatggatccttaagtagtcacgaactcccttttggtatcttttgtctaaagcaggaggcaggtttgattcaaggaacagctctggtggtcgtggacgtgggcgcgggcgtggtagaggtaactttggcagtgatgatggtggcggcggaggttggagtggtggcggtggcggtggcggcaacagtgggggatggactgacaatattggaagtggcggaggtggatggggcacaggtggtggttcctcgtgggctggtggtggcgacggaggttctggaggtggtgatagtaaccgtggtggtggtggaggctggggaacacccgctggtggttctgatggcggcggcggtggctggggagcagcacccggtggatccaacgatgccccaggatggggcagcggcaaaaaggcggtcccagcacaggatggtggtagcgggtggggagcttccgccggcggcggcagcggtggctggaactagtcaaagaactgctagatgaaatatttttttttttgttttctggaccctcttctatatctggtaattgcgctccacgggagaaaaattgtcactgttcggggaccctagtaatctgctactgaatgccgctggttttatacattttggacggccttattttgaatgcatgtacagcttaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0494900, RefSeq:Os05g0494900