Os09g0559400

From RiceWiki
Revision as of 21:03, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0559400

Description

Protein of unknown function DUF594 family protein

Version

NM_001189049.1 GI:297727228 GeneID:9267744

Length

1553 bp

Definition

Oryza sativa Japonica Group Os09g0559400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23061933..23063485

Sequence Coding Region

23062119..23063255

Expression

GEO Profiles:Os09g0559400

Genome Context

<gbrowseImage1> name=NC_008402:23061933..23063485 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23061933..23063485 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccatggcggatgtcgcagcgctatgcgagacagtcccccaatacaataacctcatccggtcagctctccaaaggacacagcctgctggggtcttgctcaagtgtgccgcacatgtcggctacacacagggattcttcgtttgccaacgcaagaacctgtaccacatgctggccgggttgatcttctccgacctagtggaggcgaatgccaagggtctcgacttcaccagctaccgaagcttcgcgccggggcgccgcaactgggtgctcaatgagaacctgcgcaaggtatgcggcctagaggtacagggcagcctgcgtgggtcctttgataggggtgtcatcctctggcacatcgccactgacctttgcatgcgccgcatgatggctgaaaacaccatcgacgagattgacaggaaatttctcgagtgcacggaggcgatatcggactacatggcccaccttctcaacctccgccctgacatgctcatgaccggcagcaggcagcacctcttcacgcaggcaatggaggaggttgagctcatcttgaaggatattgagtctcagcagcagcagccgcatagcctcaagaagctcggacgagacatcctggcaaagaagatcatcgacaaggcaaaagctgaggtcaatgctgaggtcaatgctgcgatcgacatagaaatggtaagagaacaagagagggaaatcagggtggatgagccccctccccccaagtaccctctcgtccatgacgcatgcaggctcgcagaggagttgatggataagatgggccgcagaacacggtgccaagtgatgtaccgtgtgtgggtgggcatgctcttctactccgccagcatgtgtaggggatacctacatgccaagagcctcggagaaggtggcgagttcctctccttcgtctggctcattctctcgctcaagggcgccaagaccttggccgacaagctccagatgccggagccggagccggagccggagcgggagccagagccaaagtcggggccttattcccctagccaagagatagtacaaggagagcctaccgctaccgtcgcaaccaccgccgacgaaggcgaggacctcagcttcctgcttcctcatagccctcgttcataa</cdnaseq>

Protein Sequence

<aaseq>MSMADVAALCETVPQYNNLIRSALQRTQPAGVLLKCAAHVGYTQ GFFVCQRKNLYHMLAGLIFSDLVEANAKGLDFTSYRSFAPGRRNWVLNENLRKVCGLE VQGSLRGSFDRGVILWHIATDLCMRRMMAENTIDEIDRKFLECTEAISDYMAHLLNLR PDMLMTGSRQHLFTQAMEEVELILKDIESQQQQPHSLKKLGRDILAKKIIDKAKAEVN AEVNAAIDIEMVREQEREIRVDEPPPPKYPLVHDACRLAEELMDKMGRRTRCQVMYRV WVGMLFYSASMCRGYLHAKSLGEGGEFLSFVWLILSLKGAKTLADKLQMPEPEPEPER EPEPKSGPYSPSQEIVQGEPTATVATTADEGEDLSFLLPHSPRS</aaseq>

Gene Sequence

<dnaseqindica>231..1367#gagcgtttgcgctcatctacaccagagccaacgtggtgttgacccctgcatacctggcctaccacatactgttggcgccgttccttcacatcaccgccatcgtgctcttcgccgccagcagcaagcgccaccacaacaccatcgacgtgaagatcacctacgtgctcctctgcctcaccgccgcgctggacatccttgcggagcccatccggcagctgctgttcaagctcatgtccatggcggatgtcgcagcgctatgcgagacagtcccccaatacaataacctcatccggtcagctctccaaaggacacagcctgctggggtcttgctcaagtgtgccgcacatgtcggctacacacagggattcttcgtttgccaacgcaagaacctgtaccacatgctggccgggttgatcttctccgacctagtggaggcgaatgccaagggtctcgacttcaccagctaccgaagcttcgcgccggggcgccgcaactgggtgctcaatgagaacctgcgcaaggtatgcggcctagaggtacagggcagcctgcgtgggtcctttgataggggtgtcatcctctggcacatcgccactgacctttgcatgcgccgcatgatggctgaaaacaccatcgacgagattgacaggaaatttctcgagtgcacggaggcgatatcggactacatggcccaccttctcaacctccgccctgacatgctcatgaccggcagcaggcagcacctcttcacgcaggcaatggaggaggttgagctcatcttgaaggatattgagtctcagcagcagcagccgcatagcctcaagaagctcggacgagacatcctggcaaagaagatcatcgacaaggcaaaagctgaggtcaatgctgaggtcaatgctgcgatcgacatagaaatggtaagagaacaagagagggaaatcagggtggatgagccccctccccccaagtaccctctcgtccatgacgcatgcaggctcgcagaggagttgatggataagatgggccgcagaacacggtgccaagtgatgtaccgtgtgtgggtgggcatgctcttctactccgccagcatgtgtaggggatacctacatgccaagagcctcggagaaggtggcgagttcctctccttcgtctggctcattctctcgctcaagggcgccaagaccttggccgacaagctccagatgccggagccggagccggagccggagcgggagccagagccaaagtcggggccttattcccctagccaagagatagtacaaggagagcctaccgctaccgtcgcaaccaccgccgacgaaggcgaggacctcagcttcctgcttcctcatagccctcgttcataattacctcctagtactaaattagttggctcttaattatactctcttctctaaattagctgttatgtctagtgataattagtatcttgagtgctaatgtactattgctagcaattcttgtacgtgtttctttccctgatgaatttatgtattccggcctctagctagaagaataccatttcttgcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0559400, RefSeq:Os09g0559400