Os05g0497100

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Revision as of 10:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0497100| Description = Similar to Chromosome condensation protein| Version = NM_001187544.1 GI:297724218 GeneID:9267154| Length = 9240 bp| ...")
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Gene Name

Os05g0497100

Description

Similar to Chromosome condensation protein

Version

NM_001187544.1 GI:297724218 GeneID:9267154

Length

9240 bp

Definition

Oryza sativa Japonica Group Os05g0497100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24464113..24473352

Sequence Coding Region

24470541..24470565,24470802..24470878,24470962..24471171,24471262..24471351,24471439..24471560
,24471642..24471797,24471877..24471984,24472054..24472114,24472353..24472487
,24472733..24472820,24472897..24472969,24473232..24473352

Expression

GEO Profiles:Os05g0497100

Genome Context

<gbrowseImage1> name=NC_008398:24464113..24473352 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24464113..24473352 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttccagcaagctcaaagatcagaactacagcagaaaattgaaaacgcagggggacaagtgctcaaggatcagaagctaaaagttgcaaacatccaatctcaacttgacaaaacaagctcagatatcaaccgccacaaagttagaattactacatgtgagaagttggtgaaaaaattaaccaagggcatcgaggagtctaggaaagaaaaggaaaagcttcttgctgaaaaggagaagatgatgtctattttcaaagagattgagaaggcagcttttactgttcaagaagattataagaaaacacaagagatgatggacaaccataaagatgagcttgacaaaacaaaggtagaatacaacaaattaaagaaagcaatggatgaactgagatccagtgaggtcgatgtggaatacaaactgcaagatacaaaaaagcttgccaaggagtgggaaatgaaggtgaaggcattcaggaaaaagcttgatgacattcagacaaatcttgttaaacacatggatcaaattcaaaaggatgctattgatcatgagaaactgaaagaaacattgagtgacgagcaattcaatgaggcgtgtgacatgagaaaagcagttgagatggtggcactgttggaagccctgcttaaagacttgagtcctaacctggattcaatagcagagtaccgcacaaaggctcgtgtatatggtgaacgcgttgatgagctaaatgccaccactcaggagcgtgatgatcttaaaaagcaatacgatgcattgaggaagagaaggttagatgagttcatggcaggattcaacataatatctttgaaactgaaggagatgtaccagatgattacgcttggaggtgatgctgagctggaacttgttgattccttggacccgttttcagaaggtgttgttttcagtgttagacctcccaagaaaagctggaaaaacattgccaatttatctggtggcgaaaagacgcttagctcactagctctggtgtttgctcttcaccattataaaccaactcctttatatgttatggatgagatagatgctgcgttggactttaagaatgtctccatcgttggacattacgtgaaagaccggaccaaagatgctcagttcattattatcagtctcagaaacaacatgtttgaactagctgataggctggttggcatctacaagacggataattgcaccaagagtataaccatcaatcccggaagctttgcggagagcatgaaggtagtttag</cdnaseq>

Protein Sequence

<aaseq>MFQQAQRSELQQKIENAGGQVLKDQKLKVANIQSQLDKTSSDIN RHKVRITTCEKLVKKLTKGIEESRKEKEKLLAEKEKMMSIFKEIEKAAFTVQEDYKKT QEMMDNHKDELDKTKVEYNKLKKAMDELRSSEVDVEYKLQDTKKLAKEWEMKVKAFRK KLDDIQTNLVKHMDQIQKDAIDHEKLKETLSDEQFNEACDMRKAVEMVALLEALLKDL SPNLDSIAEYRTKARVYGERVDELNATTQERDDLKKQYDALRKRRLDEFMAGFNIISL KLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLA LVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELAD RLVGIYKTDNCTKSITINPGSFAESMKVV</aaseq>

Gene Sequence

<dnaseqindica>6429..6453#6690..6766#6850..7059#7150..7239#7327..7448#7530..7685#7765..7872#7942..8002#8241..8375#8621..8708#8785..8857#9120..9240#atggagagttccccgccgaggtcacccgcgccctcgccagggagggcggggaggccgcggctgttcataaaggagatggtcctccgcaacttcaagtcgtacgcaggggagcagcgcatcggccctttccacaaggtctcgttctctctctcactcgcaagcacacgacacgagcgcgcaagctagctacagtatatcttaattcgtcgcgctcatagtcatagatgacgtattcccccactaccaatccccggttttcgtttgtttttggcgctattcaggaccctccagctgcaatgtcatgtggtgggcttgctttttttacttgacctgtacgatcgttgaaccctaggcacggcagttggatatagcaatttaacttcaattgtgatagcgtaggaggtgaccacgtatactttcatttgagttttccatttcccagtgcctacagaatcctaaataagttaaaaaccgtgttatagcatttttaggaattcgtgttatcttcagtgtggccgttctgcctggcctctagtttatgaagtgaaataccgatacgcgcattgttactaggttctgaacctatgtgacgttttgtttattaggttctgaatttgttggtctagttttggtctcacgaatgttagattagagtggaggtttttgagttgtgcactggttttacatttgttctgaaactttagagtggcatggtcatactccatcagtagtatgttttgggttcactttgttttgtttggagatattttattatgaagagtaagtcacatggtttaatggcatttgttctacccagaaatggaggttccttattcagttctatggcttctatctgaatttgccctttcatacgttgaaatttcagacctaactcttttatcctcagaatgtcgtttctgcagtttaactttcacttgttctgtagtacctaagatataaggaaagcaacgtttatcataattttaaattttactgattttcaagtgcatcaatttaagtggccaaatgactatgatttgtgagtagtaacacatcttacattccagaaatgccgtctaactttataatcgtgtttttatggtgacctgtgcagaattcacaattcttgtgtgtgtaaccatcgtgttctgtgcagaatatcattataaactgtttataggtactatcgatgagtgcactatgcttcaagctcttatgaacataggtctaccactctgtcgctaggatccatgcatcgtataaaagaataaccgctttttcttgctttcagagtttctcagctgttgttgggccaaatggcagcgggaaaagcaatgtcattgatgcgatgctgtttgtgtttgggaagcgtgcaaaacaggtgggcaatattgcttcctaactgtaaatgtttattgatgttcaacatttttctggtcagctcagtggcagatttaagctaatcattgatttattctatctcaaaaagtcattgtatttttttatccattcagcgagtgctagatgccaaagttggcatgtaagtgtaagttattcccaatgtttttaaaggctgggcaacaaactgctactttatgtttgttagtgtgttactgattttgtatgcaaggcgaaaagtaagcttcaaagtctctgcccaaaggtttttgagaatttagtgtaatggtactttcatgatagtaaactagttattgaagagaaatgtatttaatacttgaatacaatggggcccttgtatttcctgtttactattgcccatttcctccaaaggtttttccttaaaagttttggattaaatgctataaaattcacgaataacttaagctcttgagagatgatcttgctatttgttagctactccatattttcttaattcagaacaacctatttaggttgtttcaaatcatagactgtttctgaccagttttccatcattgtagatgcgcctgaacaaggtctcagaactcatacacaattcttctaaccaccagaatctagacagtgctggggtctccgtccattttcaagaaatcattgatttggtatttcttgagccaagtatttagcatttcatattgcttagctagtgccacataatttatttccctccctctatgtccatcataggatgatgggaactacagggctgttgagggcagtgattttatcatcacaagagttgctttccgtgacaacacttctaaatactacataaacgaccgtggaagcaatttcactgaagtaactaaactgttgaagggcaaaggagttgaccttgataataatcgctttttgatccttcaggtttgtgtttctttttccatttacacatgaaaaatgcgcgtgttttgtaagtttaattttggacatatgttgcatattatttagtatgtttacatgactatgagggatataacagacatccatatggtgttatattttatggttttgcactgcataacttccaagttgggcactttcagggtgaggttgaacaaatctccctgatgaaaccaaaatctcaaggtccacatgatgaggggtttctagaatatctggaagacatcattgggacaaatcagtatgttgagaaaattgaagaagcttccaagcagtgagttctttaactgatttaaggcctgttgtcacaatgagtgctttctgtccattctgtaatgaaatctgacatgttctgatacatattagattggaaatgctcaatgaaaaacggacagcatctgtgcagatgctgaagttggctgagaaggaaagagataacttagaggtgacggtctgagggtgatgaattgattcttctggttgaatgacactactgattgatatattttcctgtagagtgcgaaaaatgaggctgaaacatttatgctgaaggaactcttacttttgaaatggcaagagaaggcgaccacattggcttctgatgatgctacctcacacgttgctcagctgcaagagaatgttgcagacttggaaaagaaccttgcctctgaaaggtcatttattgttgtggatgaacatgatattttggtactgagttttatcactaattaatttggttataatccagggaaaaaattcagcatagttctcaaactctgaaggaaatggagtctgtttacaacaaacatgctaaaaggcaagaggtattgtgttgttggaacattacttgtgactcgaaagctgtttattcctagatgttcaggatagagcttttttccccacaagatggttagcgacagattttctactccctttctaacattgccagattataatgctcgtttgtatatttattctctggatgtgtttaggaccttgaaaataatatgaagtcttgcaaggatcaatttaaagagtttgagagaaaagatgtaaaatatagggaggatttgaagcatcttaaacagaagattaagaagctggaggacaaaactgaaaaggtatatttaaaatgatcccatatgtagttcaagcaaagcaacaaagtccaccttcatttttatgcaggatacatcgaaaattgatgaatcaacaaaagaggttgaagaatcatccagtttaattccacaactagaggaagagatacccaaattgcaagaaaaatttaatgaagaagagaaggtgctggagcaaattaaagaaaactctcgaggtgatttttagagcaagacatgtgcctataaatttcttctagtgcagtctgttcctttttatgaccaaacctctctctcttctctcttttttggtaattacagaagagacagagagacttcgttctaaacttactcaagtaaggtctgaacttgaaccatgggaaaatcaaataattgagcataaaggaagcttagatgttgcatctgctgagaaaaaattaatgaaagagaaggtttgtcctgctttgtatttcttttctaattaaaaagttgtggtaggccattgtcaattttctccagtactattcagctacacgaaccacttgactgcccatgaggtcactactcactagaaaacttctattcctagtacgctacagttttgccatcgccaacctggatctgccatatggagaattgagtatggcatgatatttcttgattgctggagtatagtcgaaaacaagagtgctcatctttcttcctctttttgaaaacaactaattgtatctataaatttcaagttgtgtgaattctcactaggaactgtgcattagcacagatggctagagtgcgttcatgcatgcgcgcccacccacgtttgactctccttggagtcgacgcgcgtgtccatttcctctcaattccattgatacgaaagcccctcttttggtatccaactttttttgtggactctcacttgaatgttattaactgttttcagcatgatggagcccgagcagaattaactgctgctcaaaaccagatggaaagcattaaagagcaaatcaaagcgaaggatacatatattatggagcttcaagaaaaaatagagaaacaccatagtgaagcaaatgaggctcgtaaagttgaacaggtaaagcatttgcagacttctctgggccatttctttccctcgagcagtatcactgtattcccatttgctgtggatgatcctgagtttccaatatctcggtatgcataacaggaatgcctaaaacaggaagagtcacttattcctcttgaacaagcagctaggcagaaagttgctgagattaaaaccacaagggattctgaaaagaatcaaggcactgtcttgaaagcaattttgcaagctaaggaatcaaaggaaatagaaggcatttatggcaggctaggtgatcttggcgcaatcgatggtaagatgtaattgttgtagtctcaatttgtgctagaatgtgtgcagttaaacaaccatgccttcttttttcctttggacctgaagacttttccagcttctgtacatttgcccgtttttattatgtcatgaatatatacttccaaattcatcgtattaacagatactagtcattagtcagtgtgtgatattgttagactttggaaagaactggaggttaaacttgctttgcaaatattattgtattttactgattctccgagtaaatatactagagaactaggagaagttcataattgttttatttatgtactctaggtctggattgtgctgcatatcacttaattgtgttagctgttgtgctctgcagcaaagtatgatgttgccatatctacagcatgccctgggcttgattatattgttgttgaaacaaccaattcagctcaagcttgtgttgagttattacgcagaagaaatcttggcattgcaacttttatgatactggtaaaattctggatccttttcatagcgttttcatgtttatttgtatagaagctatcttttcgttgctttcattgcttttggcatgatttggtactcttaccattacaggaaaaacaaacacatcatcttcgtaagctacaggagaaagtaaaaacacctgaaggggttccacgcctctttgatctagtaaaggttaaagatgagaagctcaagttagctttctttgccaccttggggaacactattgttgcaagtgatcttgatcaggtatatacctgaattgtattgtttgttttcgttctattatttgcttcttttgctgcttgttctatcatgtgccttgtatatttgtttctcaaagtactctactgccccactagcattttttatggaaaacttctaagaaggctagaattacttaattgaggacatatcgttctattttcatacaaaaaccgttgcagtgctgcttatatttttattttttataacagtgacatcaataatcgtttttgtcaggctactcgaattgcatatagtgcagccagtgaattccgtcgagtagttacccttgatggtgcactttttgagaagtctggtaccatgagtggtggtggtagcaaaccaagaggtggcaagatgggcacatccatccgggaaagtatttcagaagaggctgttgcaaatgctgaaaatgatcttaataagctagtcgatcaactcaacaggttacgtgaaaaaattaatgatgctaaaaaaggttaccgggccctggaagatgccaaatcccgttttgagatggaactggcaaaagctaaaaaggaggtatgtaaactactttttctgctgtgagattctattttctccttgaggtcagcttccattcatctcttgaaataggttgagagtatgaatgcacaatttagttacaatgaaaagcgacttgactctctgaaagctgcatcacatcccaaagcggacgaggttcgcagaatggaagagctggatgatatcatatctgctgagcaagctgaactaaatagacttgctaaatgttccagcaagctcaaagatcaggtatgtggctatacaggctttttgatcgcatgccaattcataagctaatctgccttagtgagcgtctgcttcaactcacaaattacttcaaatgctccatcattcagaactcactctcccagtctcctgtttgaatctgtgcctgcgtatattgatttttctatgctttgagttgttaactgaaattatttgttacatagctttgacttaagtttgctttctatactaggcatcagaactacagcagaaaattgaaaacgcagggggacaagtgctcaaggatcagaagctaaaagttgcaaacatccaatctgtgagtataagcttcaatgcttgtgtgattctgttcttcgttttggttatctgatgtctaagattttgtgcgtcaaccgccagcaacttgacaaaacaagctcagatatcaaccgccacaaagttagaattactacatgtgagaagttggtgaaaaaattaaccaagggcatcgaggagtctaggaaagaaaaggaaaagcttcttgctgaaaaggagaagatgatgtctattttcaaagagattgagaaggcagcttttactgttcaagaagattataagaaaacacaagaggtagtttagttgtattgccttacaagctgtaaagtgattggattgttttttcatttgttcaatggaaaatgttaatctgtttttttgcagatgatggacaaccataaagatgagcttgacaaaacaaaggtagaatacaacaaattaaagaaagcaatggatgaactgagatccagtgaggtatattatatttatatttagttattatgttaagtcactatgatattgttccttttgacaatatttacattttgtatgtatgtacaggtcgatgtggaatacaaactgcaagatacaaaaaagcttgccaaggagtgggaaatgaaggtgaaggcattcaggaaaaagcttgatgacattcagacaaatcttgttaaacacatggatcagtatgtgtaaatgctattttcaatactgctacgtgttttctgtattgtttctcagactaatgtgcatcttgttattttcagaattcaaaaggatgctattgatcatgagaaactgaaagaaacattgagtgacgagcaattcaatgaggcgtgtgacatgagaaaagcagttgagatggtggcactgttggaagccctgcttaaagacttgagtcctaacctggattcaatagcagagtatgaattaatgatctatacatgtcagtagcattttggcaccaccaatttccttactggcttacattggctggatcaggtaccgcacaaaggctcgtgtatatggtgaacgcgttgatgagctaaatgccaccactcaggagcgtgatgatcttaaaaagcaatacgatgcattgaggaagagaaggtattcctttctttgaatttctatccatgttgctctatttgcctcacatgcaaatatgcattatttcaggttagatgagttcatggcaggattcaacataatatctttgaaactgaaggagatgtaccaggtactttgaaataatgaatacatatatcaaagcatgtaatatggtgcttccattgttttacaatttgaagtctgaccacactttgtaagaaatgaagtctaggaagccaaaaaaagttaaagagttagttgagataagagcaggcttacccaattaactgaaaatctgaaatacttttaccactcaacctctattactaaacaacatgatttcaacagcaattcctttttgtttttagatgattacgcttggaggtgatgctgagctggaacttgttgattccttggacccgttttcagaaggtgttgttttcagtgttagacctcccaagaaaagctggaaaaacattgccaatttatctggtggcgaaaaggtatttttgcaattattattattttttttgtgcaaggatgttagttaatatggccttattttactgacaaagatggttttcaatatcgttacgagaacttgttttctactccataccttgtttccttattcaacagtaatatgagttttacatttcttgttggcattatgttctgtgcatgtgttatctcatctaatatcacttttttagtagattgttactgaactaagctttttatcttgcagacgcttagctcactagctctggtgtttgctcttcaccattataaaccaactcctttatatgttatggatgagatagatgctgcgttgggtaagtttagtggccgtcctcttggcgtttaacatatattaacacttcaatacattaatgacattgctgctcgcagactttaagaatgtctccatcgttggacattacgtgaaagaccggaccaaagatgctcagttcattattatcaggtatgcttatggcagcttagttttcctaatttttctacccgcatgtgccacgccccacttatactccagctgaaaataattttatgagaaatactgagcaaagatctgtcgaagatatatgtttgccaaacattcatccatacaagagacttagttgttcatctacaaaagtaatgctactaaagttaaaaccgaaatatttatacgtgctaagaggcagggtgaaatttccccaatctcacgtttgtcgccctgtctgcagtctcagaaacaacatgtttgaactagctgataggctggttggcatctacaagacggataattgcaccaagagtataaccatcaatcccggaagctttgcggagagcatgaaggtagtttag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0497100, RefSeq:Os05g0497100