Os05g0497650

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Revision as of 10:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0497650| Description = Conserved hypothetical protein| Version = NM_001187546.1 GI:297724222 GeneID:9272357| Length = 4979 bp| Definition ...")
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Gene Name

Os05g0497650

Description

Conserved hypothetical protein

Version

NM_001187546.1 GI:297724222 GeneID:9272357

Length

4979 bp

Definition

Oryza sativa Japonica Group Os05g0497650, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24521620..24526598

Sequence Coding Region

24521620..24521837,24523710..24523830,24523930..24523971,24524100..24524627,24525073..24525180
,24525283..24525480,24525678..24525712,24526304..24526598

Expression

GEO Profiles:Os05g0497650

Genome Context

<gbrowseImage1> name=NC_008398:24521620..24526598 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24521620..24526598 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcttaccatgcttaggcgcccgtgcgagctccacagccagtctgctgcccgtgcacctgcgtaagttccatggaaatgccaagctctcgatgacaataggcaaatggcatcgtctagccaagatctccctatggcgttatcagttgtgtcacgtttgctgccttcgtctgtactgggtacctgttcgtcatgtttccttcagtgcactggaagaaaataatgaatgcccagcatgccgcacccattgtgcaagtagacgttctttgagggatgatcctaattatgatgctttaattttggctttgtatccagatattgacaagtacgaggaagaggaacttgctttcagcgaagaggagaggactcgcaacaaaaagatccaagcatccatcgctgaaacatttcgaagacaatcagaagcactcgtgaagaagcgttccgttgcaaaagcaacaggttcaactattacgagaaggaccaggggtaatatgcgcgcaaaaaggaggggacgaactagttcccctgatattgttgcaactgacaatgaggatgaggatagagatgaaaatggcaatgagggcagcaaagagtcgtcttctgttgatgaccgttccccagatgtaaggcagaaaagagttcggaggtggcccgtgccacgatcatcccctgctaagagcattgggggtattgatagtagctttgaggatattgatgacttaggaagtggcagagatatcatgagtacttctccactacgcggagagatgcttgcctggggaaaaaatggcacccgcagtcaaacccggcatggcaattctggtggttccagtggaaggatggcaaagggtggtcgtgttaccaagttggttgaatacctacgtaataccgatgaattcgataataagttcaacttatatcttgttctacttccacttaatggacaaagcatgcctaaattggagaagccctatctcagttgccaaccgacattctctgttcgccatctttgccagtttgttgctctccaattgtctcgccatgcgaaagaagtggagatattcatcaggaagaaccccaacaatggatgctttgcatccatagatactagtgcagatgagataaaactgaatcatgacgccttagaaagattggaggaagagaaatctctttcagagctgtacccttcacttgcctctggccatggggatctgggatcatccgatgaaagcctgtacaaagttatccaaatgacaatacgccgtacacgcatcagcggatcagattttggaagtgttttctgggtctttgtcagctttgagtctttgacaatgcaggctccatggactcggtacggtgccttgaacaatgaacagatggtgggttgcaggaagaatcgtgaagtgatcaagttgctgttgaccggtgcaggtctgaccgtctgccatgccatgttaccgctgaaactagccgactggccttcgacgctcacgcagtcccgctgccagtcaaactggccgatgagtttggtacttgagatttga</cdnaseq>

Protein Sequence

<aaseq>MILPCLGARASSTASLLPVHLRKFHGNAKLSMTIGKWHRLAKIS LWRYQLCHVCCLRLYWVPVRHVSFSALEENNECPACRTHCASRRSLRDDPNYDALILA LYPDIDKYEEEELAFSEEERTRNKKIQASIAETFRRQSEALVKKRSVAKATGSTITRR TRGNMRAKRRGRTSSPDIVATDNEDEDRDENGNEGSKESSSVDDRSPDVRQKRVRRWP VPRSSPAKSIGGIDSSFEDIDDLGSGRDIMSTSPLRGEMLAWGKNGTRSQTRHGNSGG SSGRMAKGGRVTKLVEYLRNTDEFDNKFNLYLVLLPLNGQSMPKLEKPYLSCQPTFSV RHLCQFVALQLSRHAKEVEIFIRKNPNNGCFASIDTSADEIKLNHDALERLEEEKSLS ELYPSLASGHGDLGSSDESLYKVIQMTIRRTRISGSDFGSVFWVFVSFESLTMQAPWT RYGALNNEQMVGCRKNREVIKLLLTGAGLTVCHAMLPLKLADWPSTLTQSRCQSNWPM SLVLEI</aaseq>

Gene Sequence

<dnaseqindica>1..218#2091..2211#2311..2352#2481..3008#3454..3561#3664..3861#4059..4093#4685..4979#atgatcttaccatgcttaggcgcccgtgcgagctccacagccagtctgctgcccgtgcacctgcgtaagttccatggaaatgccaagctctcgatgacaataggcaaatggcatcgtctagccaagatctccctatggcgttatcagttgtgtcacgtttgctgccttcgtctgtactgggtacctgttcgtcatgtttccttcagtgcactggaagagtccgtgtttttcttggttatgaactgtgatgtcagaatatgagtttctgatgtctttattgctatatcctgacctctatggctgccatcagtcttacactgttccattgccttaactaagcttgtggcaccaaattgttgccgatctctctcttaggctctatgacatatcatataatttactattccatcttctgttcttaagagtctttcctctgctcctcctccaaaaccgtaaggatcactgcatagtagagtagatcagagtccttttattttctttcccccgttttgaactatgaatgcctgtgctctgttgttaactgtagttattaggtgcaaaacttgcccctcaataacactatgaacagtgcaatttccacttagaaaagcatattgctattagagatgcttgatagatcctgatacgcacattgtcacattcactcccaataggtttgcaggcatagttacttcagtgtttttcgagggagccaatgcaggggtagtctttttacaccttctataatagttggtcctgcataggtgcctgctttgaatgtagaagtgtgcttattcaatctgtcaaatgagtcgacaagttttcacttaagattccttttaagcccactgctgttaattgtagttgttaattgcaaaatggcccctcaattacactatgaacagtgcacatgaaaatcatattgctattagagatgcttgatagatcctgatacacacattgtcagattcactcccgataattatgcagacatagttactttagtgtttttcgaggagccaatgcagtggttttttttagaccttctattggcatgttcttttttatatataaaatagttggtcctgcataggtgtctgctctgaaagtatgcattttctttttagtctgtcaaatatgagtcaacaagttctcacttaatattcctttttagccttctggtataatcctattatgaacattgccttctaggcttccacgaatggtaactattttcttcacagaaaataatcttgttgtacacttctctctgaaaccgatgtgatgatggataatgaatgacttgaatttgctgctaatcaaagcttgaaactgatgtatgaatattgtttttctcatacaggtttatactagtgaaattaatggatatacggaaagaagtgcagtgccctatatgcttaggtaaggatgtgcttttgtctagttactttcagatctagagagaatatatttacattgttctgtgcattttcctctttacagctttacttgtaatttgattcaatgttattatttggatgctaagtttttctcctactatctactatagaaggtgaaaccatcaaagtcaatgatctacatgtttttgtaatgcaagtatgcatatagttattgtcctctgataaataaggagatatatagagaatattttacctgattttactttgaaaaagctacattaagaagcttatattcttcacatgttgcaaaattttatataagtgcaaccagctagttctaattatgaatctaggctgagcaagattctcatatgtacaactctaagtagcacctctgtgcaaactgtgcatacctgatcatttgcttgtcttatggtcctattgcaggcattatccggaagacaaggacagttatggagtgtttgcaccggttttgtagggattgcatagataaatccatgcgactagggtatggtctctgatattgttattgtctaaaatgctgtcagtgtcattttcagaaagttgagatgtaacatgactggagtttcaaaatccaaagagatacttcattcctatgataatctaagcaatgctgtgtttttgcagaaataatgaatgcccagcatgccgcacccattgtgcaagtagacgttctttgagggatgatcctaattatgatgctttaattttggctttgtatccagatattgacaagtacgaggaagaggtgatgcataaattctccaattagacacatagtagtttagtttatttagcttccgttttagttccggtgccaaggattataatttgcttgatactacaggaacttgctttcagcgaagaggagaggactcgcaacaaaaaggtggggttatctagaattctagatggaaccatagatgcatttgatgtttaaaggaaataatttcccctgcccatttataagttgtctctttatattgttattgacattggtttcatttctcatggaagatccaagcatccatcgctgaaacatttcgaagacaatcagaagcactcgtgaagaagcgttccgttgcaaaagcaacaggttcaactattacgagaaggaccaggggtaatatgcgcgcaaaaaggaggggacgaactagttcccctgatattgttgcaactgacaatgaggatgaggatagagatgaaaatggcaatgagggcagcaaagagtcgtcttctgttgatgaccgttccccagatgtaaggcagaaaagagttcggaggtggcccgtgccacgatcatcccctgctaagagcattgggggtattgatagtagctttgaggatattgatgacttaggaagtggcagagatatcatgagtacttctccactacgcggagagatgcttgcctggggaaaaaatggcacccgcagtcaaacccggcatggcaattctggtggttccagtggaaggatggcaaagggtggtcgtgttaccaagttggttgaatacctacgtaataccgatgaattcgataataaggtaaaaacagtacataacatgcagtaatattcgaacttcaaagttccatctacttttttctttttccatatgggatatgcctgggttcctttagtcaaatataattgaacagattaccaccttctgtcttctatttattcttcaggagatacagaggtgcgaaggggactataatatatatacattttagaaaataggtcatttggacccagcttttataaaaagctaggactatgatatatcgcatggcatttcttgtttctttgcatgccagatgtgtccctgtgttgtgtctcacagtgtgcttttgtagtgccatgaatgcaatatacgttaccgcatgcatgaacttgtgcaagttattaggagggacctgataaattgtacatggagtccatgcctcttatccattaggtttgctgaactttttgtttgtgttttgcagttcaacttatatcttgttctacttccacttaatggacaaagcatgcctaaattggagaagccctatctcagttgccaaccgacattctctgttcgccatctttgccaggtgatcacttgtttaatgtatactattggttggttcttaggcaattttagcttacctggctcaatatgaataagcaaagactctacttctacaacttttcagtttgttgctctccaattgtctcgccatgcgaaagaagtggagatattcatcaggaagaaccccaacaatggatgctttgcatccatagatactagtgcagatgagataaaactgaatcatgacgccttagaaagattggaggaagagaaatctctttcagagctgtacccttcacttgcctctggccatggggatctggtattcctcagtttctaattatgtctagctgtttactttttcgctattgcttctttttaatactatattgtattgctttgttacctcctccaggaattattatattccctgaaagcagaagtgtagatcaaattaatggcacaagttctccttcagtatcaatctgatcaaatagcggggaatatgatggcatgcagggatcatccgatgaaagcctgtacaaagttatccagtatagaaaaagaaaaaagagaatcagcaaacttagctcttccttagttgtgactcgttaaatttgctcttggtcttctgatatagtacatggttcattcatttaaattggaggaattgaaatgcatgggtggatggaattaagtagcagtcgtaaaagaaggccaaacatatagtctggtgactgctcgttgtgatattggtgttgcctgtccaacttgaactgatttttaaatggagatatcaactgatttaacttggtagctcgattcccagatggtggaatcgcaattgctcccatttcagtttgttttcacgctactcctttagtttgttttcatgttactcctttaataccagataaaacataccttagtactacgaatttggacatgtctcgatgtgcagatggtggatttgcaattgctctcattttagtttgtttttatactataaatctgaacagaggcaagaatatctttaactttaatccaattctaggttttagattctgggaaggtagtagtatcgacgtgcatgccttcacttctgatgtctgcatgcatcggtgtttcttttctccccattgcagaatgacaatacgccgtacacgcatcagcggatcagattttggaagtgttttctgggtctttgtcagctttgagtctttgacaatgcaggctccatggactcggtacggtgccttgaacaatgaacagatggtgggttgcaggaagaatcgtgaagtgatcaagttgctgttgaccggtgcaggtctgaccgtctgccatgccatgttaccgctgaaactagccgactggccttcgacgctcacgcagtcccgctgccagtcaaactggccgatgagtttggtacttgagatttga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0497650, RefSeq:Os05g0497650