Os10g0126600

From RiceWiki
Revision as of 21:04, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0126600

Description

Cyclin-like F-box domain containing protein

Version

NM_001070617.1 GI:115480977 GeneID:4348019

Length

2894 bp

Definition

Oryza sativa Japonica Group Os10g0126600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:1667340..1670233

Sequence Coding Region

1667796..1667804,1667929..1668084,1669081..1669971

Expression

GEO Profiles:Os10g0126600

Genome Context

<gbrowseImage1> name=NC_008403:1667340..1670233 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:1667340..1670233 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggtcgtcctgggaggcgcaggcgcaggagggtcaaggccccgacgcgcgctgccggcatggactggatcagcggcctccccgacgaaatcctccaccacatcatgtccttcctgaacgcgcgccaggccgtgcagacgtgcgtgctgtcccggcggtggagcgatctctggcgcaccgtgccctgcatcaacgccgacttcaatgagtttgatttcattgattaccaaggggacgatgaggactacaacgacgaggtggcgttcaagaggttcgttaaccggatgttggagctccgcgatcctgccaccatgatggacaaattctggctcaagtacaaaatatcagacgggtacaatgaatacaaggattccaatgtagatgccaacaggtggattagccatgctttgcaaaagcaggccagggttatggaggttgtcgtgttctcctttccattggagctcgatcactcggtgttcacttcatgctacctgagaaaaattgggttctcctgtgtttctttacaccaaggtttcttcaagcaacttgacgccggctgtccagaattggaagaactcttcttacatgattgcactattgcggatgaggagatcttctcccagtcactgaaggttttgacaatcgacgacactgaattctccaaggcgaacaaggcatatatttctattccaagtgttacttctctcaccttgtctagtcctgagaattccacacctatgctaaaggacatggcattactaacgaccacatcagtatcagttaaattttatacattcagttatggttttgatgctaatgatctccgccagtgtctctggagcctttctggtgttacaaacttggagttgaattatgagggtacagagctgacgttcgaaaacaatttgcaatggtgcccagaattcatcaatgttgtcaacctgactcttggtcagtggtgcctggatgcaaacttctatgcactaattgtcttccttcagaactcagcgagactagagaagttaactctgaatcttgcgaaggatcgttag</cdnaseq>

Protein Sequence

<aaseq>MEGRPGRRRRRRVKAPTRAAGMDWISGLPDEILHHIMSFLNARQ AVQTCVLSRRWSDLWRTVPCINADFNEFDFIDYQGDDEDYNDEVAFKRFVNRMLELRD PATMMDKFWLKYKISDGYNEYKDSNVDANRWISHALQKQARVMEVVVFSFPLELDHSV FTSCYLRKIGFSCVSLHQGFFKQLDAGCPELEELFLHDCTIADEEIFSQSLKVLTIDD TEFSKANKAYISIPSVTSLTLSSPENSTPMLKDMALLTTTSVSVKFYTFSYGFDANDL RQCLWSLSGVTNLELNYEGTELTFENNLQWCPEFINVVNLTLGQWCLDANFYALIVFL QNSARLEKLTLNLAKDR</aaseq>

Gene Sequence

<dnaseqindica>2430..2438#2150..2305#263..1153#ggggcagactgcgaaggacgccgcctcccattccgtggtgctctggaaagtcgaggcgcgacgccggcgacgtgagcgccattggaggtcggcggcgagttcttcaccggcagattctgctcgcgactccttccttgcactgcgatctcaattcttgcttacttgcgctgttgattcatatggcttcttttggtcttctgctcttgtgcagtttccacgcgcaccacctgttcgacgaaacgccactgcgtgatcggccgccatggagggtcgtcctgggaggcgcaggcgcaggagggtcaaggccccgacgcgcgctgccggcatggactggatcagcggcctccccgacgaaatcctccaccacatcatgtccttcctgaacgcgcgccaggccgtgcagacgtgcgtgctgtcccggcggtggagcgatctctggcgcaccgtgccctgcatcaacgccgacttcaatgagtttgatttcattgattaccaaggggacgatgaggactacaacgacgaggtggcgttcaagaggttcgttaaccggatgttggagctccgcgatcctgccaccatgatggacaaattctggctcaagtacaaaatatcagacgggtacaatgaatacaaggattccaatgtagatgccaacaggtggattagccatgctttgcaaaagcaggccagggttatggaggttgtcgtgttctcctttccattggagctcgatcactcggtgttcacttcatgctacctgagaaaaattgggttctcctgtgtttctttacaccaaggtttcttcaagcaacttgacgccggctgtccagaattggaagaactcttcttacatgattgcactattgcggatgaggagatcttctcccagtcactgaaggttttgacaatcgacgacactgaattctccaaggcgaacaaggcatatatttctattccaagtgttacttctctcaccttgtctagtcctgagaattccacacctatgctaaaggacatggcattactaacgaccacatcagtatcagttaaattttatacattcagttatggttttgatgctaatgatctccgccagtgtctctggagcctttctggtgttacaaacttggagttgaattatgagggtacagaggtatggttatttgtattacttagtgtatccatccaccttgatttaggtatcaatatgaaaaaattgaaacttaagcttttcttctcgtcatttcataattgcaatggtttagtagcctgaacctgtaaaactaacatcgcatagctaattcatatgttgtgaaaccatgatgtattgataatatgatggatgttatcaacacttgatgcaatctagttcatgtactccggtcatttgtgcattattcaactagccctgaagtttcttagttcgaagtttgatctaaaaatgaaacatgatcatttctcatgtaggactttacatgttctagtctagatgcaatatcagggttgccaactgaatgcattttgtccaatatctgacagactattttactttagttgtactttttgaaagagagggttattggtgattgtatgtcctacacctgccccaaggccagattttttatggctgcaaatacatgtgcatgctatttgtaagatagtgaaagaaaaatattgatttgtataggctgtcattttcgattgtccaatctttcatgtaatctttatatttcaggattaattgtatattgcattttacattttagacagtatacttggttgggatgtgtaatgtgttgggtgttacaacacacagacattatgctagcataattttaatgttaggagtcattaaaagacaacatacaaacagaaaattcttctggggaattgttgaatgtcctactgcttcctgatgatatatttgtgttgttttttttactggttttggacttccatggaaaccatcctgacagtgagttgcatgtgctcgagagactcttggtgaaaacaaacaagtagaacattgtttattttggtcttttgttgacatcagttcattttctactgtgatcttttgccatccattatcttgaagctctcaatttagttgataagttttgtgattgaggaagtggtgtttttgcagctgacgttcgaaaacaatttgcaatggtgcccagaattcatcaatgttgtcaacctgactcttggtcagtggtgcctggatgcaaacttctatgcactaattgtcttccttcagaactcagcgagactagagaagttaactctgaatcttgcgaaggtaattgctttcctcaaatgtaatacagatcctactcgattgtttctatttgctcaagaggttgtgcattgggaaataacttactgtttttcgtgctacggtgcatttggaaaaaatctccaaggatcgttagcgagcttatggaaagatcatttacatgcgagcaccttaagattgttgaagtcaaatgcttggaggatgatccccaggtcatcagtgtgcaagatttctttgctagtaatggcatggcctctgttcagtttcatatcaaacactggggccaatacgaggaagaggatgagttacctgcatttgttcggtatgaggagagatgaaatgccaaaggatcttttgcatttgtttgtcatcccattgaagaatcaactcgctttctgctacattcactggctacagtagagttccgaggtcttattttgcatttttgctggtctgtagtaatggcatccaataactttgctagttttcattccactcctaatctctgattacattagcagttgttcaaccaaggacctatttatcccttgtacaacagaatttctttccattcatcaactattttttgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0126600, RefSeq:Os10g0126600