Os05g0498200

From RiceWiki
Revision as of 10:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0498200| Description = Eggshell protein family protein| Version = NM_001062482.1 GI:115464694 GeneID:4339214| Length = 915 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0498200

Description

Eggshell protein family protein

Version

NM_001062482.1 GI:115464694 GeneID:4339214

Length

915 bp

Definition

Oryza sativa Japonica Group Os05g0498200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24565986..24566900

Sequence Coding Region

24566228..24566818

Expression

GEO Profiles:Os05g0498200

Genome Context

<gbrowseImage1> name=NC_008398:24565986..24566900 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24565986..24566900 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctctgtcgacgcggcgcgtctgcgtgctcctgctgctggtcctcctcggcctcgcggcgacctccaaccgcgcgcgcgcggcgcgagtagtccccgccgcaggcgccgcggctcttcgtcgcgaagaaggcgaggcgcctgcggccgttcaccgcggacgccgcggggttcctcgcatcggccgcggcggcggagtcggtggcggtggcgtcaccgtacccgtcgagcatgtcgctagacggagactccaggagcacgagcacctcaacgaggagatgctgccgtcgttcagcggcggtggcggctctcgcggcggcggcgtctcttccggtggctcttcccgtggaggcggcagctcgatcggctccggtggcggttcacgtggcagcggtggcggctccagctcaggttcacgcggcgccggcggcactgaatccggccgacgcttcatcccgccaattatccccgccgtcccggggggcggtggcggcggctgcagcggcagcggcagtagctctggccgccgcggcgtttggaacgtgggagtcgccgcagcctcggtcctcgccgtcgcctggctcgtgtag</cdnaseq>

Protein Sequence

<aaseq>MALSTRRVCVLLLLVLLGLAATSNRARAARVVPAAGAAALRREE GEAPAAVHRGRRGVPRIGRGGGVGGGGVTVPVEHVARRRLQEHEHLNEEMLPSFSGGG GSRGGGVSSGGSSRGGGSSIGSGGGSRGSGGGSSSGSRGAGGTESGRRFIPPIIPAVP GGGGGGCSGSGSSSGRRGVWNVGVAAASVLAVAWLV</aaseq>

Gene Sequence

<dnaseqindica>83..673#catcgcgtccgcgcacacggcacagccagcttagtacgtttggctacctatcacgcgcgcgctaatctcccgcgctcccggcatggctctgtcgacgcggcgcgtctgcgtgctcctgctgctggtcctcctcggcctcgcggcgacctccaaccgcgcgcgcgcggcgcgagtagtccccgccgcaggcgccgcggctcttcgtcgcgaagaaggcgaggcgcctgcggccgttcaccgcggacgccgcggggttcctcgcatcggccgcggcggcggagtcggtggcggtggcgtcaccgtacccgtcgagcatgtcgctagacggagactccaggagcacgagcacctcaacgaggagatgctgccgtcgttcagcggcggtggcggctctcgcggcggcggcgtctcttccggtggctcttcccgtggaggcggcagctcgatcggctccggtggcggttcacgtggcagcggtggcggctccagctcaggttcacgcggcgccggcggcactgaatccggccgacgcttcatcccgccaattatccccgccgtcccggggggcggtggcggcggctgcagcggcagcggcagtagctctggccgccgcggcgtttggaacgtgggagtcgccgcagcctcggtcctcgccgtcgcctggctcgtgtaggatgctgctgcgtgactcgggcggtagctgcgacgccgtctcgccgatgcagaatcatcaataattgtggtgtgatcgccgtatttaggtttgccatgcacacgggcagtgtaccgacgtgcatcggtgcatgtagtggttttaattttcgcctggtctggatgtggctgggtaggtcatatcgttagtgcgtcgatgtggttcggtaggtcatatatatattgttagtgcgtcgttgtgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0498200, RefSeq:Os05g0498200