Os05g0498400

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Revision as of 10:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0498400| Description = Similar to Protein translation factor SUI1| Version = NM_001062484.1 GI:115464698 GeneID:4339216| Length = 2054 bp| ...")
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Gene Name

Os05g0498400

Description

Similar to Protein translation factor SUI1

Version

NM_001062484.1 GI:115464698 GeneID:4339216

Length

2054 bp

Definition

Oryza sativa Japonica Group Os05g0498400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24584965..24587018

Sequence Coding Region

24585940..24585976,24586301..24586512,24586592..24586645,24586749..24586793

Expression

GEO Profiles:Os05g0498400

Genome Context

<gbrowseImage1> name=NC_008398:24584965..24587018 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24584965..24587018 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctgatctcgacgttcagcttccatctgccttcgatccgtttgctgaggcaaatgctgaggactccggcgctggccctggagcaaaggattatgtgcatgtgcgcatccagcagcgcaacggcagaaagagtctaactactgttcagggcttaaagaaggagtacagttacaacaagatcctcaaggatctgaaaaaggagttctgctgcaatggtactgtagtccaagatccagagcttggccaggtcattcagcttcaaggtgatcagcgtaagaatgttgccacgttcctagttcaggctgggattgctaagaaggacaacatcaagattcacggtttctaa</cdnaseq>

Protein Sequence

<aaseq>MSDLDVQLPSAFDPFAEANAEDSGAGPGAKDYVHVRIQQRNGRK SLTTVQGLKKEYSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQA GIAKKDNIKIHGF</aaseq>

Gene Sequence

<dnaseqindica>976..1012#1337..1548#1628..1681#1785..1829#acaacgcagctcctggtcaagtcttatctgccttcctccctcctctcgccttccgcctcgcgtgcgctccaccaccgaaaaaaaggacaggtattcccctttcctctcttcctaatcaggtgcatgcatgtctcagatttggggatctctgggtgttcggtcgcatctggtcatgaattttcgatcggttcgataggtcgttggtcccggtgaagaaacggatctcgtagcttcggagttgttgcgtgggtgtggaggttttgggcggaacggatttggtgcgattttgctttgattcaggggtgtttggggcgtcggaggaggcgtagatgggttggatgtgttcgtttgggggtgatgggtggtttgatttggggggatttggggagtctcatggttaatttcgcgattttggggtggggtggaaaccctaatacgatctgattcgttcttccttgctttggggaattcatgaacaaccttgagatggttagatatagtgatccgttcactggagtttcatattacgatttgtgcagcgtatgagtaagatttgggggaatcgtgaccttgaaaatctgtcgcctcgtcctgcccagaaattgggggaactcatgtttggtggttgatttattagcatggaaggtacgggcatcgaagggaataagccccgtacaataacgatttgggaaccatgaccttgaattcatcgccccttcccgccgagaaattgggggaactccatgtgtaggggttgatcgaatacgaagaacatgattaggctgtgcgcttctgctatagaaaattttatgttggggggcttgctggatattgttctgtgctagctgcaatttaatttcttcattgtgcctttggtatagcatattgatgtgagtgatctgtgcaggttccacataaagaccaacgagtaaaagcttgatctgtccggtgccaaccaatcaacaaacaagtttcatgtctgatctcgacgttcagcttccatctgccttcggtacgcttcagttcatctatgctacctcctgaatgaaccaaactttgtataatttgatcacttcctcctgaatgaagcaaactttgtatagtttgatcacttcttgtttcgttgtaatacaaactaatgggcttctaacttgtcaacgttggattaatgaatcatgaattaatttaccaaaatgtgcgcatggcatagaggttcatgtttattgtaaaatgatcaacagcgtacatagcatatgtgatgagctgtattgaaattcctatctgttctctggtgatatcctatctgtgttctgatgatgttgcattgttttgatagatccgtttgctgaggcaaatgctgaggactccggcgctggccctggagcaaaggattatgtgcatgtgcgcatccagcagcgcaacggcagaaagagtctaactactgttcagggcttaaagaaggagtacagttacaacaagatcctcaaggatctgaaaaaggagttctgctgcaatggtactgtagtccaagatccagagcttggccaggtatgcacttagcaatgcttaactggttctcagttttctgctatgaggatgtgctggtaacgtaaatttgtggttgcaggtcattcagcttcaaggtgatcagcgtaagaatgttgccacgttcctagttcaggtattgagaattatcagagcagagctatgacttctcaagagattaatgctgctaagttgacctatttatattctgaatctgattttttatctctttttgctaggctgggattgctaagaaggacaacatcaagattcacggtttctaagctgcctatagatgctcgtatgcaatatcgtgtgctgccagatattgggaagcctctgaagctaccagttactgttctctatatttgaagtcataagactatttgttgctattaaagcgattcttgcttgatgcaagttgtgtcctcattatgcactaccggcatattatgagtatggtttgtctgggatattgtcaatctaataaaagtacttgctatttgact</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0498400, RefSeq:Os05g0498400