Os05g0498700

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Revision as of 10:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0498700| Description = Similar to Gda-1 protein| Version = NM_001062486.1 GI:115464702 GeneID:4339218| Length = 2655 bp| Definition = Oryz...")
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Gene Name

Os05g0498700

Description

Similar to Gda-1 protein

Version

NM_001062486.1 GI:115464702 GeneID:4339218

Length

2655 bp

Definition

Oryza sativa Japonica Group Os05g0498700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24599621..24602275

Sequence Coding Region

24599978..24600019,24600141..24600251,24600335..24600418,24601097..24601197,24601332..24601938

Expression

GEO Profiles:Os05g0498700

Genome Context

<gbrowseImage1> name=NC_008398:24599621..24602275 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:24599621..24602275 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaacttgtggcatctcggggatgagttccgtgggcagtcgaaggtagtggaggaccgtcagtggtctctcatgacatcgaagttggctgagatcaacaagtccaaggcggagaggacgaatgagcttgactatgcgcggatgaacaccatccctgatgtcaagcaatgggataaggtatcctaccaccaagatgagagcaagatggaccacctcaatcttggccttatgaatctagatcttaagatgaacgacatcaggatgaatgacgcagctatgaagaatcctttccgcggcatggcctacaacatgaatcagctgtaccccaagggaggcaatggcaatgttaactcgttcaagatgaatgttggggtcaacaaatatttgcatagtccaaatggcaaagatgtcaatggcaaaaacagtggtgccaacagcaatggaagtaacagcagcgggaacaacagcagcaactctgctgttgacaaacgattcaaaacattgccaacaagtgagatgctaccaaggaatgaagtgctcggtggatatatctttgtttgcaacaatgacaccatgcaggaggatctcaagaggcagctttttgggttgccagcaagatatcgtgattcagtccgagcaattattcctggtctacctcttttcctctataactacacgacccatcagcttcatggggtatttgaggcttctagttttggaggatctaatattgatcccactgcatgggaagataagaagtgtaaaggtgaatctagattcccagcgcaggtgaggatccgcattagaaagctctgcaagcctttggaagaggatgctttcagaccagtgctgcaccattacgatggtccaaagtttcgtcttgagctctccatagctgagaccttatcactgctagacctttgtgagaaagaaggcgtctga</cdnaseq>

Protein Sequence

<aaseq>MDNLWHLGDEFRGQSKVVEDRQWSLMTSKLAEINKSKAERTNEL DYARMNTIPDVKQWDKVSYHQDESKMDHLNLGLMNLDLKMNDIRMNDAAMKNPFRGMA YNMNQLYPKGGNGNVNSFKMNVGVNKYLHSPNGKDVNGKNSGANSNGSNSSGNNSSNS AVDKRFKTLPTSEMLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPARYRDSVRAIIPG LPLFLYNYTTHQLHGVFEASSFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKLCKPL EEDAFRPVLHHYDGPKFRLELSIAETLSLLDLCEKEGV</aaseq>

Gene Sequence

<dnaseqindica>2257..2298#2025..2135#1858..1941#1079..1179#338..944#cgctccttgcgcctccccaagacgagtcgcggctgaacagaagagggggagtaggcggcgatctccatctggcgactcgcgagcagagcaggggaggggatcctggtgagcatctacatcctctttctttctgattcatctctcttactttttttctggaatttgcttgcgtttgttcgttaaccctagcttctcttctagatctggaagaagctctcctcttaatttcagcgccttaaccttaatacaagtaccagtttgagtttgtttgttcccaagttggatccggccctgggtaatttctttcttgctgaaggtggagagactgagctgagctatggacaacttgtggcatctcggggatgagttccgtgggcagtcgaaggtagtggaggaccgtcagtggtctctcatgacatcgaagttggctgagatcaacaagtccaaggcggagaggacgaatgagcttgactatgcgcggatgaacaccatccctgatgtcaagcaatgggataaggtatcctaccaccaagatgagagcaagatggaccacctcaatcttggccttatgaatctagatcttaagatgaacgacatcaggatgaatgacgcagctatgaagaatcctttccgcggcatggcctacaacatgaatcagctgtaccccaagggaggcaatggcaatgttaactcgttcaagatgaatgttggggtcaacaaatatttgcatagtccaaatggcaaagatgtcaatggcaaaaacagtggtgccaacagcaatggaagtaacagcagcgggaacaacagcagcaactctgctgttgacaaacgattcaaaacattgccaacaagtgagatgctaccaaggaatgaagtgctcggtggatatatctttgtttgcaacaatgacaccatgcaggaggatctcaagaggcagctttttggtatgtgatccaacttaccttatcttctgaatcatcacttggcatattgttccgagaataaattcatgctgctatttacgatgatcaatatcaaataaccttctgatatataatcatatattgctgttctgcagggttgccagcaagatatcgtgattcagtccgagcaattattcctggtctacctcttttcctctataactacacgacccatcagcttcatggggtatttgaggtgtgttaatttcctttttcagatactcataaatcatcttatgaatttcataaggagctctttacttgaaaacgaaagatccataagcagccatgaaattaagtgcaaatgttcacttatagattgattattctagcatctttttaagtatttatatcattgttttggaaaacatctgatgcttcagcctatttaaccaacaagtatgaatatagctttcgaagtttgaacacctcgcccctcacactttgtgaggcactccaaatctatgttactatgtaccatactcttataaatgagccagattactgtttctgtgcatcatttgactggcctactccagttttcattacgcacatagtatttcactgcatgcatgttaattgttatactgttacacaacatttctggggtattcatcattgttctgtactgagctactactttttaacgctatctgggttctcatttttatgctgcactgtttctgcctgaaattgtttttgcctaattattatgaaatacttttgtctttaaatgaaatttgtggaacttttctgtgacatgataatacttttgggactttattttgctcataaacttctatttgtaatcaacaatgtaccccaatagaaactaacaggttattgttgctataactgtttttgctcatatcaggcttctagttttggaggatctaatattgatcccactgcatgggaagataagaagtgtaaaggtgaatctagattcccagcgcaggtaatggttacagctggcgtgtgtttatttctcatttacttttggtttcatgcactgatattctgctatattcattctactaggtgaggatccgcattagaaagctctgcaagcctttggaagaggatgctttcagaccagtgctgcaccattacgatggtccaaagtttcgtcttgagctctccatagctgaggtatgtaggttattactattactgtgcacatggtttgactataatgttactatatgcagtattgaattgcacaacaaaaatgtggccatgcaaactgagcaatatcatcttaaatttacagaccttatcactgctagacctttgtgagaaagaaggcgtctgaactgttgaagaggtggttgctttgaggctttagtacatatcgctcttgtatgttgtggaaggtggttcactatgttctcatgttcgttaagcgcaagctgttggttgccccctgcaaggacctggtacttgaaggcctctaatacgtgtgcctgtctgtattgtgccgtccgtaatcttgaaaatgtgtatgttttgctatttatgtattttggtagagtacacccagaagggaaccccaaaatggggggatactgtaatgcatcataatgccctaaataagggcagttgatgttcagagtgtattcgtgttgtatcttaaaaaccttgcatttgccttaatgctgctttgcacttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0498700, RefSeq:Os05g0498700