Os09g0552300

From RiceWiki
Revision as of 07:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0552300| Description = Protein kinase-like domain containing protein| Version = NM_001070408.1 GI:115480558 GeneID:4347794| Length = 3458 b...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0552300

Description

Protein kinase-like domain containing protein

Version

NM_001070408.1 GI:115480558 GeneID:4347794

Length

3458 bp

Definition

Oryza sativa Japonica Group Os09g0552300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22712807..22716264

Sequence Coding Region

22713275..22713502,22713579..22713626,22714568..22715356,22715814..22716014

Expression

GEO Profiles:Os09g0552300

Genome Context

<gbrowseImage1> name=NC_008402:22712807..22716264 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22712807..22716264 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgttcttggggaacggctactgctcgtcggggtcggagggggaggacgaggacgaggggatggaggggtaccggaagggagggtaccacgccgccaggcccggcgaccgcttcgccggcgggaggttcgtcgcgcagcggaagctcggctgggggaacttctccaccgtctggctcgcgtacgacaccctcctcaacagatttgtcgcgctcaagatccagaaaagcgcgagggattacgcacaggcggcactccacgagattgagttgctgtcggcgatagccaaaggtgacccgacaaattccaagaatgttgtgcaattgctggaccatttcaagcatgctggtccaaacggacatcacgtttgcctggtcaccgagttcctcggtgatagcttgctaaggttgatacggtacaaccggaataagggcattggtctgagcggagtcaaggaaatctgccgatcagtgttggtcggtcttgattacttgcacagagagctcggcatcatccacacggatttgaagccggagaatgttcttcttgtatcgacaataaacccatcgaaggacccagtgcgctctgggttcacaccgattcttgagagaactgtgagcaaccagtacagcggatcagtaattagtttcagtgagaagatgcttaagatgcgggcaagacgcgctgtcgccaagatttcactgaggagggagtctcttggtggagttgcagcagagatggagaaggagagaagcctggatggtattagcttgaagtgcaagattgttgattttgggaatgcctgctggggtagtcagcagcttgctggtgaaattcagacaaggcagtacagagctcctgaggtgatcattggtgctgggtactcatattctgctgatatgtggtcatttgcttgcatggcctttgagcttgcaaccggtgaagtgctgtttgctcccaagacttgccagggctgtagtgaagatgaggatcacttggctctgatgatggaaacccttggaaagatgcctaagaagattgctagctcaggtactcgttcaaaggattactttgatcggcatggagatttaaagaggatcagaaggctgaagttctggcctctagaacgtctacttgttcagagatacaatttcactgaacctgatgcccaaggtttagctgattttcttcgtccaattctagattttactcctgaaaacagacccacagctgcagcttgcttgaagaatccatggcttaactga</cdnaseq>

Protein Sequence

<aaseq>MAFLGNGYCSSGSEGEDEDEGMEGYRKGGYHAARPGDRFAGGRF VAQRKLGWGNFSTVWLAYDTLLNRFVALKIQKSARDYAQAALHEIELLSAIAKGDPTN SKNVVQLLDHFKHAGPNGHHVCLVTEFLGDSLLRLIRYNRNKGIGLSGVKEICRSVLV GLDYLHRELGIIHTDLKPENVLLVSTINPSKDPVRSGFTPILERTVSNQYSGSVISFS EKMLKMRARRAVAKISLRRESLGGVAAEMEKERSLDGISLKCKIVDFGNACWGSQQLA GEIQTRQYRAPEVIIGAGYSYSADMWSFACMAFELATGEVLFAPKTCQGCSEDEDHLA LMMETLGKMPKKIASSGTRSKDYFDRHGDLKRIRRLKFWPLERLLVQRYNFTEPDAQG LADFLRPILDFTPENRPTAAACLKNPWLN</aaseq>

Gene Sequence

<dnaseqindica>2763..2990#2639..2686#909..1697#251..451#ggcggtggcggaacggtcacttctcttcttcacccgacgcaacaatcccatcgctggtggcgatttcgcgaatccacctcgtttaaaaaggcaaagtctagcctagctttcctccctcttgctcgccggctgcggagaaggggttcgagtgagatagaatccggaggaggaggaggaggagattgcggcggccggacggcggcggatcggttgattgattgattggttggttggttggttgggttgatcgatggcgttcttggggaacggctactgctcgtcggggtcggagggggaggacgaggacgaggggatggaggggtaccggaagggagggtaccacgccgccaggcccggcgaccgcttcgccggcgggaggttcgtcgcgcagcggaagctcggctgggggaacttctccaccgtctggctcgcgtacgacaccctcctcaacgtacgcctctcttgccgcccccgattcctctcttgctttccgtttcttgtcttgtttttccccctctctctttgcctgttctttactcgatgctcggttggtttggttcggttgcttttggatattggaaacttcggttgaggtcgttggaagcttgctttttatctgaaactgtgcgccctgtctcctatctcctgttcatcaactgatttgtgtttggtttcccttcttcttttggtacagatttctgaaatgctctgcagccatttgtttgcttctgatgaaaaaaaaaagggagaaattttcctacatgtttatattgtttctaccgcacgtctactattccgattcgtgcaaaaaaaaagttttttttctccatcacaaatatagcagttgtatggtgcaaccaatatatcatgagttgtcaatttgagtattgcaagtccgaattttgcagagatttgtcgcgctcaagatccagaaaagcgcgagggattacgcacaggcggcactccacgagattgagttgctgtcggcgatagccaaaggtgacccgacaaattccaagaatgttgtgcaattgctggaccatttcaagcatgctggtccaaacggacatcacgtttgcctggtcaccgagttcctcggtgatagcttgctaaggttgatacggtacaaccggaataagggcattggtctgagcggagtcaaggaaatctgccgatcagtgttggtcggtcttgattacttgcacagagagctcggcatcatccacacggatttgaagccggagaatgttcttcttgtatcgacaataaacccatcgaaggacccagtgcgctctgggttcacaccgattcttgagagaactgtgagcaaccagtacagcggatcagtaattagtttcagtgagaagatgcttaagatgcgggcaagacgcgctgtcgccaagatttcactgaggagggagtctcttggtggagttgcagcagagatggagaaggagagaagcctggatggtattagcttgaagtgcaagattgttgattttgggaatgcctgctggggtagtcagcagcttgctggtgaaattcagacaaggcagtacagagctcctgaggtgatcattggtgctgggtactcatattctgctgatatgtggtcatttgcttgcatggcctttgagcttgcaaccggtgaagtgctgtttgctcccaagacttgccagggctgtagtgaagatgaggtaagaaactgttatttatgttgtttaatttcaacttctcaagaataccatcctatgtcttagtattcctgctagttctgatgataatccaggcatacaaatatgcatcaatatgtcacatagtcccttgcaacatacgacatattaaccaaataataaaatgcttttaaaagcatctgctagggccttggcctcttgggccacttcatcaaacaaatgtgcaagcagttatcatgaaagatgcacccaacctgacaagcaccaacctagctactgaatctttagaaaaatgaaaaatgaatttattgggtccacactcttactcagtagtattcaaattaacttaaccaacttctgatctgcagaagttgatggtgaaggatatcatgtgatgttgctatttgagcagtttttatcatcttgcaaagtcactttcgtttcaatatcaatttccgattaaaagtactgaacctattaaattttttcgcataaaaggtgccagccaggatactaggactgttgtgcagtgtaaactgcgtcgtaatatgtactgggacaaattgatctgtgttgttattgtattgaagaaaaaaggaaattgtcctctgttctgattctgttaaattcatacttatgaagaaaaatatctaactgagaaattcctcttgccagatataatgcactggtacatataaagtaccaaccggtgatccttgtcctattaaaaataactgcagctaaaacttatgttactgcctgcttgattgctctgttaaagtgaacttgatatcatgcctatgtaagattgtctgacacattgatgcacattgaattaactaatcagtcaacttcactacttcttacttcgatataaaatctactggcatagaagtgttatagtcaatcaatcacctcatcattctgttggtattcctttataggatcacttggctctgatgatggaaacccttggaaagatgcctaagaaggtttggcaagtttctccctacactgcatctatcttgatgtttttgagttttctctaatccttctgttctgtttcagattgctagctcaggtactcgttcaaaggattactttgatcggcatggagatttaaagaggatcagaaggctgaagttctggcctctagaacgtctacttgttcagagatacaatttcactgaacctgatgcccaaggtttagctgattttcttcgtccaattctagattttactcctgaaaacagacccacagctgcagcttgcttgaagaatccatggcttaactgattcgacgatacggtgacttttgaagcctaacaagtagaatcttatacaagctatgttgactatcaattactctgtttgactgagaatgcagagaattatggccttggttctttgccttctgcaagctttctgctagcttggagagcttggtttttctgatgcagctcagttttcatagagcaaacagtagacaccctcattatctggatattgatagcaaagatgttgggggtatcatcagagtgattcttgagctcaagtttcctttttcttttatgaaatgcttgaccatcatcatgtatctggatgtagtagcagaatttccattagtgtgttttgggtgtggagctagtgaaatgctaattaacgtcagcatgtgcgctggcctgaattctgtcggctgtgcctcgtgttgatgtaaagataaatatttgctaatgtgatctgggccatctggcagtggctacc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0552300, RefSeq:Os09g0552300