Os05g0506200

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Revision as of 10:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0506200| Description = The stop codon is not identified.| Version = NM_001187552.1 GI:297724234 GeneID:9268124| Length = 5018 bp| Definiti...")
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Gene Name

Os05g0506200

Description

The stop codon is not identified.

Version

NM_001187552.1 GI:297724234 GeneID:9268124

Length

5018 bp

Definition

Oryza sativa Japonica Group Os05g0506200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25068264..25073281

Sequence Coding Region

25068264..25068341,25069760..25069915,25070258..25070309,25070383..25070541,25070611..25070647
,25070771..25070805,25070902..25070953,25071167..25071216,25072143..25073281

Expression

GEO Profiles:Os05g0506200

Genome Context

<gbrowseImage1> name=NC_008398:25068264..25073281 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25068264..25073281 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttactgctgttgatcataagaagaagataatatgtattaatgacaccgttaatgttctggaagggccattccagggtaagcaaggagttgttaaacacttgtacatgggcatactgtttatccataatgaaagtgaaagtgagaacagcggatttttctgcgcccagtgcagttcatgtgaaaatgtcaagaagcggaaggaactggcaagtttcacttttggaaattcggacgataatcctattcccatgttttcatatgaacaaaatgagcaacgggacaatgaaaggccttacaggagcactagagaacaacttttctcaattggggagatgctgcgtattcgaaagggtcctatgaagggctatctctgtcgagtagttcgaatatttcgcaatgatgtaactgttaagctagattcactgctgaagattgtcacagtgcaagctgagtttctttcagtcccagctaaaagaggggataactcttctggtgctccatctggtccttttggttcagaagccgataaaccctcatgggacaatggattaccatcttttggaagtgattcctggcaacccttttcaagtgctgcattaccagttcagaatgcagatggggaatctgaagttgatccatggtgtaagaaaacttcatcttctgccaatgattctgatccatggggtacgaaaacaaaatctgcatctgttgatgtatggaacaacagtaccacacaagtagagaactccagtgacaatgcatgggataaacaacctggaggtagtggacctaatattggtggaagctcttgggacagaccagcaactgataaggaaagtgaaaaaagtgacaactggggtgaggcatgcaaggagacagagaaaactggtagtgatacagatccctggggaagcaaggtcaaagagatagatctgaaagaaacggatagctggggaaaggcttcaatgcaaccagagaagaagttggaggatgatagtcaaggatggggccaacctgttggcaagtcaaaccaagaccaagaaaaaggtgcagacaaatgtggggcttgggatactgttattgctgggtcatcttcgtctgttcctggcagaggggatgatgactcctggattaaaactgatactttgcctgttgctcaagatgatgcctggggcaactcaaaagattgtagtgatggggcagctgggtggaatgaaactagaacatctaaacaaagccacagcactggaggatgggatgctgctgctgccaacctgaatgaatcatctgatgtggatgcacataaggactcatggggcaaagcaaaagatacaacagctaatgctgaagaaaaaaataatgaaagtggaaactggaacaaagctggaccactagacaaagtttgtggcagtgattggggtagtccaaagttttccagtggtgatggtccatccagctggaacaagggagacaaaattggaggagattctcaaaacggcagctggagcagacctggtggaaactttgaaggtggtcgtgggtttgggcgaggacggggcagaggcaggggccgagaatctggggatttcggtggcagaaatgaccaaggaagctggaagaactcagggactagtgacagttctggaaggccctcttggaggtctgatagtcaagttgagaaggaagtgggagattctggtggatatcgggggagaggaagaggaagaggccagtatggaggacagggaagagga</cdnaseq>

Protein Sequence

<aaseq>MLTAVDHKKKIICINDTVNVLEGPFQGKQGVVKHLYMGILFIHN ESESENSGFFCAQCSSCENVKKRKELASFTFGNSDDNPIPMFSYEQNEQRDNERPYRS TREQLFSIGEMLRIRKGPMKGYLCRVVRIFRNDVTVKLDSLLKIVTVQAEFLSVPAKR GDNSSGAPSGPFGSEADKPSWDNGLPSFGSDSWQPFSSAALPVQNADGESEVDPWCKK TSSSANDSDPWGTKTKSASVDVWNNSTTQVENSSDNAWDKQPGGSGPNIGGSSWDRPA TDKESEKSDNWGEACKETEKTGSDTDPWGSKVKEIDLKETDSWGKASMQPEKKLEDDS QGWGQPVGKSNQDQEKGADKCGAWDTVIAGSSSSVPGRGDDDSWIKTDTLPVAQDDAW GNSKDCSDGAAGWNETRTSKQSHSTGGWDAAAANLNESSDVDAHKDSWGKAKDTTANA EEKNNESGNWNKAGPLDKVCGSDWGSPKFSSGDGPSSWNKGDKIGGDSQNGSWSRPGG NFEGGRGFGRGRGRGRGRESGDFGGRNDQGSWKNSGTSDSSGRPSWRSDSQVEKEVGD SGGYRGRGRGRGQYGGQGRG</aaseq>

Gene Sequence

<dnaseqindica>1..78#1497..1652#1995..2046#2120..2278#2348..2384#2508..2542#2639..2690#2904..2953#3880..5018#atgcttactgctgttgatcataagaagaagataatatgtattaatgacaccgttaatgttctggaagggccattccaggtgaaatgttaaccatcccttattccctttagcaagaattgttgtaaagttctttttgcctgtaatctgggaaaatatgcatcttttttcgttcttttcaagaaaacattcacctgaaagaattctaaaggcaaaattggttccattccacttgaaaggtcactagtttagatatataccattgaaagattgtggtgcactttaataccatcgaaaggtacatctgttttaatttttctttttaccattccatcctttgccagtttggttttttgctatttttccttttatttccacaccaaaagggtgtgcgtcagtacatgtttgccctctactgcagtgctgtttggtttcagccaagcacgaagcagtttaatcaaccaagcaaactgacccccaaattcatgagaaaaccatccatgcctacctcagtaaccttgctagttgatatacctccatcccaacaaaatcccctgctctatgccctctgttgcaccatcctttgatatcaatcaaacacagcagcacacagaagtgacaagtggtgactggtgaggtggtggggccatgtgtggaggttgttgtttacgaggatgagtagctggacacctcatccttgctgggaagcgagacggtgccatggggaagcagccagggatggctttggagaatcttcacaggagcaaaagggatgtgagaagaggattgagggagagatggggtgatggaatggaaattgaagtgagcagagtgccaaaatcgtcaacagtaacagttttaaggacagggcatgatggagaagtaagaaaactgaagatcttaaagtgtgcccatgaacttcgatggtatagacctaaaacagtgatatttcaatgccacgaaaccaatatttccaattctaaccccggtcaaaaaaaatatttccaattctaacataccaaatactaacatacctgatatggttattgtaattctctcaagtgtctggtaaagtcgtaatttagcatattttaggaaatattttgtactccctcttcttatttacttgttagttagaacatcaacatagtttgtgtatgcacttgttttatcattacattttctaatcacatactatatttatgaaaaatacttaactacatccaagaatatttcatgacaaatatactaatatcatttttacatattatctattaattttggtatatatttgtgatttaagatttcttggtttgactgcacgcatcttaaaatgacgtctatctgtgaactgagggtgccttttaaaatgaatgtaacgcattattctcataataaaatgatttacagcactagtctatgcttctacatttctttaattatgagaatttgattcctcccatttggcacccttactgattcatttaatatttttacagggtaagcaaggagttgttaaacacttgtacatgggcatactgtttatccataatgaaagtgaaagtgagaacagcggatttttctgcgcccagtgcagttcatgtgaaaatgtcaagaagcggaaggaactggcaagtttcacttttggaaattcggtatgtagaattgcagatacaatgcatgcactgttctacttcctctattccatattgtaagacggtttaattttgtcctaagtcaaacttctctaacttcgaccaagtttattgtaaaatgtaccatatctacaacatcaaattagtttcattaaatccaccataaaatgtcttgattgtgtatttatttggtactataggtaattatttttctataaacttggtcaaagctaaaatttgacttataggacataactaagataccttacaatatggaacggagggagtacttactaaagaaggtttgatattttctgtgacactttgtttttgatgtaccaggacgataatcctattcccatgttttcatatgaacaaaatgagcaacgggacagtaagtgttcctggagattgatgattttgtcagcataaaatagtttttttccctgattcccttgatcctacagatgaaaggccttacaggagcactagagaacaacttttctcaattggggagatgctgcgtattcgaaagggtcctatgaagggctatctctgtcgagtagttcgaatatttcgcaatgatgtaactgttaagctagattcactgctgaagattgtcacaggttggttacttgagtatccttgcagctgttttttgacagtgattgactacttctgtgtaatgtttgcagtgcaagctgagtttctttcagtcccagctaaaagagggtaagcagcttagcatgcttctcttctcttttcattttgtgcttgttttagtaacgtgattttgtaaaccatcatattgttgcttaatgccacttacatctgtgcaccttattgcattaccagggataactcttctggtgctccatctggtccttttggtaagtgcaagtttcatgcacactgcaactattgccaatttactcgctgctggcttgctgccatggagtttgttacctatgctgattgtaatgtaggttcagaagccgataaaccctcatgggacaatggattaccatcttttggaaggttctttcttgctttccagcttcctactttgtgaatgttttaataaattgttggacttcagatttcctaatcaaccacctttatccgaccccttcccaccaatcaaaatgaacctatgcggttgacttggtgtatatcattggttggttaaataaaaatcctcgactgttatttatatttgcactattcactgaattgttcaatcttgtgcagtgattcctggcaacccttttcaagtgctgcattaccagttcagaatgcaggtatattcagtcgtaggcctttctatttggtggtatagtttggctttgttaatttttagtattgtgaagtcatgatgttgcaacatttaacctgttcaaaattgcttgctcaagtataactaggggtggaaacgagcctggctcggctcggcttgcaatggctcgcaacaagctagggttggcttggctcggctcggttagagaaatgagctaaaacatgagctcggctcggctcgtttcctggctcgagccagctcgagctggcttgcgagccttccgttgaagctatataatttgtaatcattaagaaaagcaataacaaatcatcaacatgtaaaattaaaataactttatatattcaattcatcaaaatctagacgataaattacatattgacaaataataactccactaaaaaataaagtcatccatacaaatacatgatggcttaggctcgcgagccaaatcaggcggctcgcgagctagctcgggctcggctcgtttcagaaacgagctgaaaatgaggcttgggcttggctcgtttggcattcaagccgagccgagctaagcgagctcgagccaagcctgagctgagctcacgagcccaagctttttttccacccctaagtataacacactcaaccagttatccattccatgtctcatagaagtccttgaatttttgtaagaataggcgcaacaggggatcaagtgggctctctaggattggtagagcagataactcaaatccgtttaatttggtgtgggggtgaagtcacaggtggaatggttttttattgggttaatgggacaactttttctacaaaattgacaagtcttaaacgtgaacagaaaaaaaatgatgctcatttattagtagtttaagtctttataattttgctcatgtgcaacttctgcatttttagatggggaatctgaagttgatccatggtgtaagaaaacttcatcttctgccaatgattctgatccatggggtacgaaaacaaaatctgcatctgttgatgtatggaacaacagtaccacacaagtagagaactccagtgacaatgcatgggataaacaacctggaggtagtggacctaatattggtggaagctcttgggacagaccagcaactgataaggaaagtgaaaaaagtgacaactggggtgaggcatgcaaggagacagagaaaactggtagtgatacagatccctggggaagcaaggtcaaagagatagatctgaaagaaacggatagctggggaaaggcttcaatgcaaccagagaagaagttggaggatgatagtcaaggatggggccaacctgttggcaagtcaaaccaagaccaagaaaaaggtgcagacaaatgtggggcttgggatactgttattgctgggtcatcttcgtctgttcctggcagaggggatgatgactcctggattaaaactgatactttgcctgttgctcaagatgatgcctggggcaactcaaaagattgtagtgatggggcagctgggtggaatgaaactagaacatctaaacaaagccacagcactggaggatgggatgctgctgctgccaacctgaatgaatcatctgatgtggatgcacataaggactcatggggcaaagcaaaagatacaacagctaatgctgaagaaaaaaataatgaaagtggaaactggaacaaagctggaccactagacaaagtttgtggcagtgattggggtagtccaaagttttccagtggtgatggtccatccagctggaacaagggagacaaaattggaggagattctcaaaacggcagctggagcagacctggtggaaactttgaaggtggtcgtgggtttgggcgaggacggggcagaggcaggggccgagaatctggggatttcggtggcagaaatgaccaaggaagctggaagaactcagggactagtgacagttctggaaggccctcttggaggtctgatagtcaagttgagaaggaagtgggagattctggtggatatcgggggagaggaagaggaagaggccagtatggaggacagggaagagga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0506200, RefSeq:Os05g0506200