Os09g0552600

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Revision as of 07:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0552600| Description = Cupin 1 domain containing protein| Version = NM_001070411.1 GI:115480564 GeneID:4347797| Length = 1431 bp| Definiti...")
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Gene Name

Os09g0552600

Description

Cupin 1 domain containing protein

Version

NM_001070411.1 GI:115480564 GeneID:4347797

Length

1431 bp

Definition

Oryza sativa Japonica Group Os09g0552600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22727194..22728624

Sequence Coding Region

22727409..22727529,22727614..22728557

Expression

GEO Profiles:Os09g0552600

Genome Context

<gbrowseImage1> name=NC_008402:22727194..22728624 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22727194..22728624 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgactgacatgtctcccaaggccggcaagccgctcgtcgagaatgacgctggctcatacctggcgtggtccggcaaggaccagccggccgtcgccggcgagaagctcgggtgcggcctactcgtcctgaagcccctcggcttcgcgctgccgcactacgccgactccggcaagttcggctacgttcttggcggcagcgcggtggtcggggttcttccggcaggggtggacgccagggagagggtggtgcggctcgaggccggcgacgtgatcgccatgcgcgccggggaggtcacgtggtggtacaacgacacggacggtgaggatgtcaccatcgtgttcatgggcgacaccgccggcgccgtcagcccaggcgacatctcgtacttcgtcctcgccggcccgatgggcgtcctgggaggcctcgacgccggcctcctcgccaaggcgtcggggctgacgtcgccggagcaggcggccaccgccttccgcagccagcccgccgcgctgctcaccaggctaaacggcaagctgcacggcgtccgcccacgcgagcacgacaggcacgggctcgtcgtgaacgcggcgcgcgtgccggcggacagcaacaccggcggcgccgccgccgggacgaagacggtcaccgcggcgcacctgccagtgctggcgcagctcgggttcagcgtcgggctcacgcgtctcgacgcgggcgctgcggttcgcgggccctgggtgctccgcgacgccgcggcgcaggcggtgtacgtcgccagggggagcgggcgcgtccaggtcgccggcgccggcggcgcgtcgacgctgctcgacgcggaggtcgcggcggggagcctgctcgtcgtgccccggtacggcgtgtcgctcgcggccgcggacgacgccggcggcatggagctggtgtcgctgatcaaaagccccaggccggcgacggagcacttcaccgggaagggatcggtgatcggcggcctgacggcggagatcgtgcaggcggcgctcaacgtgtcgccggaatttgtggaacagctcaggaccaagtactga</cdnaseq>

Protein Sequence

<aaseq>MAATDMSPKAGKPLVENDAGSYLAWSGKDQPAVAGEKLGCGLLV LKPLGFALPHYADSGKFGYVLGGSAVVGVLPAGVDARERVVRLEAGDVIAMRAGEVTW WYNDTDGEDVTIVFMGDTAGAVSPGDISYFVLAGPMGVLGGLDAGLLAKASGLTSPEQ AATAFRSQPAALLTRLNGKLHGVRPREHDRHGLVVNAARVPADSNTGGAAAGTKTVTA AHLPVLAQLGFSVGLTRLDAGAAVRGPWVLRDAAAQAVYVARGSGRVQVAGAGGASTL LDAEVAAGSLLVVPRYGVSLAAADDAGGMELVSLIKSPRPATEHFTGKGSVIGGLTAE IVQAALNVSPEFVEQLRTKY</aaseq>

Gene Sequence

<dnaseqindica>1096..1216#68..1011#ataacgcagatcagccaagaacgagttcatcttcttcttcgtgttgttgtagcatttgattcgagatatggcggcgactgacatgtctcccaaggccggcaagccgctcgtcgagaatgacgctggctcatacctggcgtggtccggcaaggaccagccggccgtcgccggcgagaagctcgggtgcggcctactcgtcctgaagcccctcggcttcgcgctgccgcactacgccgactccggcaagttcggctacgttcttggcggcagcgcggtggtcggggttcttccggcaggggtggacgccagggagagggtggtgcggctcgaggccggcgacgtgatcgccatgcgcgccggggaggtcacgtggtggtacaacgacacggacggtgaggatgtcaccatcgtgttcatgggcgacaccgccggcgccgtcagcccaggcgacatctcgtacttcgtcctcgccggcccgatgggcgtcctgggaggcctcgacgccggcctcctcgccaaggcgtcggggctgacgtcgccggagcaggcggccaccgccttccgcagccagcccgccgcgctgctcaccaggctaaacggcaagctgcacggcgtccgcccacgcgagcacgacaggcacgggctcgtcgtgaacgcggcgcgcgtgccggcggacagcaacaccggcggcgccgccgccgggacgaagacggtcaccgcggcgcacctgccagtgctggcgcagctcgggttcagcgtcgggctcacgcgtctcgacgcgggcgctgcggttcgcgggccctgggtgctccgcgacgccgcggcgcaggcggtgtacgtcgccagggggagcgggcgcgtccaggtcgccggcgccggcggcgcgtcgacgctgctcgacgcggaggtcgcggcggggagcctgctcgtcgtgccccggtacggcgtgtcgctcgcggccgcggacgacgccggcggcatggagctggtgtcgctgatcaaaagccccaggtaacaagacgagcagcggcaggcaatcgtgacgtcatacgtgagcgcatgagttttcacttgggatttcgttgtgtcatgcaggccggcgacggagcacttcaccgggaagggatcggtgatcggcggcctgacggcggagatcgtgcaggcggcgctcaacgtgtcgccggaatttgtggaacagctcaggaccaagtactgaacgccggatttgatgaatccggtactgtacgtccatgtgtcctctcgtctctatacgtttcctgttttcagcacgcgacgaagttaattaggcagtggctactgctccggtgttcagtcttgacacgtgaatagtctctaaacgaaataattaatcgaaaccatactgtaattagctgaagctgaaactacttgtatgcaatattattataaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0552600, RefSeq:Os09g0552600