Os05g0506500

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Revision as of 10:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0506500| Description = Similar to GDSL-motif lipase/hydrolase-like protein| Version = NM_001062520.1 GI:115464770 GeneID:4339256| Length = ...")
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Gene Name

Os05g0506500

Description

Similar to GDSL-motif lipase/hydrolase-like protein

Version

NM_001062520.1 GI:115464770 GeneID:4339256

Length

1855 bp

Definition

Oryza sativa Japonica Group Os05g0506500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25083394..25085248

Sequence Coding Region

25083394..25083608,25084690..25084911,25085008..25085248

Expression

GEO Profiles:Os05g0506500

Genome Context

<gbrowseImage1> name=NC_008398:25083394..25085248 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25083394..25085248 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagctcaaacttgtattttctatcaccttcctctactgtctctctggtgtgagctcaacctcacactatttcacctcgatgttttcctttggaaactcctacatcgacaccggtaacttcgttatcatggcaactccggttatgcccgtgtggatcgacaagcctccttacggcatgacattctttggccaccccacgggccgtgtctgcaatgggagagtcatcgtcgatttcatcgccgaggagtttggtctccctttccttccagccttcatggcgaacagctcaagcatctctcatggcgtgaacttcgccgtcggcaccgcgccggcgatcgactctgcattcttcaagagaaataacattgcagataagcttctgaacaattcgctggatgtgcagcttggttggctcgagcatctcaagccgtcgatttgcaacagcacagatgaagccaatggattcgccgccggtggcatcctcaaggcttgctgcggcggcggcgggccgtacaactggaacggcaacgccatctgcggcatggcgggcgcggtcgcgtgcgaggacccgtcggcgtccgtgcactgggacggtggtcactacacggaggccatctaccgctacatcgccaaggggtggctctctacggcccttacgctgatccgccaattttga</cdnaseq>

Protein Sequence

<aaseq>MELKLVFSITFLYCLSGVSSTSHYFTSMFSFGNSYIDTGNFVIM ATPVMPVWIDKPPYGMTFFGHPTGRVCNGRVIVDFIAEEFGLPFLPAFMANSSSISHG VNFAVGTAPAIDSAFFKRNNIADKLLNNSLDVQLGWLEHLKPSICNSTDEANGFAAGG ILKACCGGGGPYNWNGNAICGMAGAVACEDPSASVHWDGGHYTEAIYRYIAKGWLSTA LTLIRQF</aaseq>

Gene Sequence

<dnaseqindica>1641..1855#338..559#1..241#atggagctcaaacttgtattttctatcaccttcctctactgtctctctggtgtgagctcaacctcacactatttcacctcgatgttttcctttggaaactcctacatcgacaccggtaacttcgttatcatggcaactccggttatgcccgtgtggatcgacaagcctccttacggcatgacattctttggccaccccacgggccgtgtctgcaatgggagagtcatcgtcgatttcatcggtaagttcagcaatatttcgattcggagaacaatacaaatagttcaatttcctgaaaattacaatgacactggaagaataatcggtttgtttgtagccgaggagtttggtctccctttccttccagccttcatggcgaacagctcaagcatctctcatggcgtgaacttcgccgtcggcaccgcgccggcgatcgactctgcattcttcaagagaaataacattgcagataagcttctgaacaattcgctggatgtgcagcttggttggctcgagcatctcaagccgtcgatttgcaacagcacagatgaagccaatggtgcgtcggctggaattggtaacaattctctgaatcgaagacagcatcgtactgcactcttctccacgagcctaaattgacttcaagagaccgattggtctctacagggttcaagaactatttcagcaaatccctcttcatcgttggagagttcggggtgaatgactacaacttcatgtggacggccaagaagaccgaaaaagaggtcaaatcgttggtgcctcaagtcgtggaaaaaatcaccacggccgtggaggtaaacttcgatctgcattagtatcaatttgcagttttactttgttactatattcgttccaaaatataagggattttggttcccatcctagtactacgaaatctgaatagacgtagcactatatacatatattttagaacgaagagagtactatatacatattaattcacttgtattcttgtttacattgcttcaactttgggtattgcagaggctgatcaaccaaggcgcggtttactaggtcgtgccgggaaacccgccaatgggggtgctcgccaattgtcctcacgctcttcatgagcccgaacacgacagactacgatggcctcggttgcctgcgtgctgtcaaccgcatgtccaagcgccacaacgcaatgctccgtgcggctctcgacgggctcaggggcaagtaccctcatgccaagatcatcttcgccgacttctaccgacccatcatccaagttctctaagaccccgtccgttttggtatgtatattttctagtctcaaaaacgagtctcctctaacgtactactctttgatatacgtcactaacatgtgagcttattgactgtgggatccacatgtcagccactcaaaattagagggcagtatattagacgatccgtttgcctagctgcttactaatcaagtacagtgtcccgttgcaagatttggttcgttcagttttccataaggaaaaaagaaagcaatgaccagtactacgaaatctgaatagacgtagtattaagatgtgtcacatccagtacatggtatatccatctacaatatatggttaagtgatttgtacatttgtgatgtgcaggattcgccgccggtggcatcctcaaggcttgctgcggcggcggcgggccgtacaactggaacggcaacgccatctgcggcatggcgggcgcggtcgcgtgcgaggacccgtcggcgtccgtgcactgggacggtggtcactacacggaggccatctaccgctacatcgccaaggggtggctctctacggcccttacgctgatccgccaattttga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0506500, RefSeq:Os05g0506500