Os10g0392500

From RiceWiki
Revision as of 21:08, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0392500

Description

Conserved hypothetical protein

Version

NM_001071049.1 GI:115481841 GeneID:4348534

Length

1247 bp

Definition

Oryza sativa Japonica Group Os10g0392500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:13439983..13441229

Sequence Coding Region

13439983..13440118,13440275..13440370,13440484..13440523,13441091..13441229

Expression

GEO Profiles:Os10g0392500

Genome Context

<gbrowseImage1> name=NC_008403:13439983..13441229 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:13439983..13441229 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgctcgtgctccctcgacttgtccgtacaccctttacccctatcctctgcacgatacggtggcggcgggagggcggagagaagcagctgtgccgcattagctcttcgctggtttcagaaactcaacttgttccagattcagtcaggataggaagagattatgtgataattaacagaagttctgcagtgcaggacattcctgccgctggtcgtgtcttggacagccagagctctcgaattctcagccttaagtacattggatcacatacaaggtctggcttcttggagtctatatgggcctcgtgccattctatctttgcactgaggcctgctgagcgcctggatgcttataacatactctctctctctctacttgtcaacactgaaatatgttttctcgggacctga</cdnaseq>

Protein Sequence

<aaseq>MVLVLPRLVRTPFTPILCTIRWRREGGEKQLCRISSSLVSETQL VPDSVRIGRDYVIINRSSAVQDIPAAGRVLDSQSSRILSLKYIGSHTRSGFLESIWAS CHSIFALRPAERLDAYNILSLSLLVNTEICFLGT</aaseq>

Gene Sequence

<dnaseqindica>1112..1247#860..955#707..746#1..139#atggtgctcgtgctccctcgacttgtccgtacaccctttacccctatcctctgcacgatacggtggcggcgggagggcggagagaagcagctgtgccgcattagctcttcgctggtttcagaaactcaacttgttccaggtatagttccaggtgctccgtgctcgtcagggctgaaagagattacagatcttatttggtgattcgcaggtatgatagtctttctcccacttttgttttcctgtcatgacatagaattagtgaagagcaaaataatgcatggcggataaatgattgcaacttgcaaggcagcatgttaaacatgcacagctctctcttgcctaggaaattcttggactaggagatgtgtttacgttgcagttggcacatgcgttcagttgtcaacgctcctaaactcttcacctttcgtatggatcaaatgaaggattgaaaatatgtgactcttcctatcttaattccatcggttggctagctagctccttctagccaacacatttttttttaaaaaaaaaattcttggactggcgttcccagccttgagtacactgaatcgcatagaaagtactcatctcatattttcatgtcatgtaccatcaaatcctctctatgactttatggatctacggtttttgtttaggcttcctgttggtacttaattagagttgtttcttgcatattttacttcagattcagtcaggataggaagagattatgtgataattaacaggtctgatgaccttgctcccagttttgtttttgtgtaatccgtttactgaaaagtaatgcatggtggatgaattgttgcaagaaagcatgctaaacacgcactgtactgtgcagaagttctgcagtgcaggacattcctgccgctggtcgtgtcttggacagccagagctctcgaattctcagccttaagtacattggatcacatacaaggtactcacctcatgtcatgtatcatcaatcctctttatggacctggagttaggtgcacctcatcagcttaagctctcaaggttggcctgctcctcatcagctttctatcttctatatatgttgtgcatgttaatttcgatggtttgtctcgtgcaggtctggcttcttggagtctatatgggcctcgtgccattctatctttgcactgaggcctgctgagcgcctggatgcttataacatactctctctctctctacttgtcaacactgaaatatgttttctcgggacctga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0392500, RefSeq:Os10g0392500