Os05g0508400
| Gene Name |
Os05g0508400 |
|---|---|
| Description |
Jacalin-related lectin domain containing protein |
| Version |
NM_001062530.1 GI:115464790 GeneID:4339266 |
| Length |
3444 bp |
| Definition |
Oryza sativa Japonica Group Os05g0508400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:25221190..25224633 |
| Sequence Coding Region |
25221290..25221292,25221797..25222015,25222505..25223239,25223327..25223671,25223743..25223958 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:25221190..25224633 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:25221190..25224633 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgagtatcaaaagcagcgacgggaagagccccatagtggttggcccttggggtggcacaggaggatacccttgggatgatggtgtatactcaacggtacgccaggtcatcatcacccatggtgcagctattgactccataaggattgaatatgatctgaaaggaagttcagtctggtcagagacacatgggagcaccgatggaggttctgaaacagataaggtgaagctagatttccctgacgaaatccttgtgtctgtaagtggctattacgggtcagtctgtggaactccagttatcataagatcattgacatttcaaagcaatcgttccatatacgggcctttcggtactgaagatgggacacctttctcactcccagtaagcagtggtaaaattattggttttcatggaaggtcagggtcgtatctcaactcaataggcttttatctgaagcaagtgaatgtttcagatcgatcaaattctccagtcttgcctcagagtagaagtattacaagtgcatataacaaaaatggttatagctttcctgagggtgcttcaggatatgacatggtccttgcagtgagagataggggtgacagctatgctgtttatactagcaattaccctaatcagcagtatacaaatccatccccagattacaatgatggaatccgctggaataaggtgccacaaactagtccatcactgcagatggtatcttttcctagtggttacggagatagaggaggtgcagctctgagtagccacgagacctatggtccttggggtggaagtggtggcaccatgtttgatgatggcatgtacaccggtgtgtggcagatcaatttgactcgtgcagtgggaattacttctataaaggtactttatgatcgaaatggccaagcagtgtggggaaacaagcatggattcagtggagctgtttcaccagacaagatagtatttgattttccctcggaggtcttgactcatataaccggctactatggcacgacaatgatcatgggtccaacagtggtcagatcactcacattccacacaaacaagcggagatacggaccatatggggatgagtgtggcacgtatttctccaccagtttttctgatgggaggatagtaggattccatggtagggagggatggtacattgatggcatcggggtccatgttcaggaaggtaacttggctgcaccgcgagttagtagtagatcaacgattgagatgaacccctctttgcgctacgacatgcttgcacaatcaaggagtgaaacatacaatgaggttccttatagcatggtgaaagaaccagttccaatggggccagggccatggggtggcgaaggaggccggccatgggatgatggtgtctacactggtgtgaagcaagtctatgtgatgagaggcacctttatcggctcgatacagatcgagtacgacaggggtgaccaatccgtctggtctgcaaggcatggaaccagtggccacataacccataggattaaactggactacccacacgaggtcctgacatgcgtatacggctactacaacaccaacagggaggaagggcccagggttctgaggtcgatcaccttcatcagcaaccgagggaagtacgggccattcggagaggagttcggggcatacttctcgtcggcgaagacggaagggaaggttgtgggcttccatggccggagcgggcaacacctggacgccattggggtgcatatgcagcactggatgggagacaggaggcctgctcccaagtacgtgctatcaaagtacctcttctga</cdnaseq> |
| Protein Sequence |
<aaseq>MSIKSSDGKSPIVVGPWGGTGGYPWDDGVYSTVRQVIITHGAAI DSIRIEYDLKGSSVWSETHGSTDGGSETDKVKLDFPDEILVSVSGYYGSVCGTPVIIR SLTFQSNRSIYGPFGTEDGTPFSLPVSSGKIIGFHGRSGSYLNSIGFYLKQVNVSDRS NSPVLPQSRSITSAYNKNGYSFPEGASGYDMVLAVRDRGDSYAVYTSNYPNQQYTNPS PDYNDGIRWNKVPQTSPSLQMVSFPSGYGDRGGAALSSHETYGPWGGSGGTMFDDGMY TGVWQINLTRAVGITSIKVLYDRNGQAVWGNKHGFSGAVSPDKIVFDFPSEVLTHITG YYGTTMIMGPTVVRSLTFHTNKRRYGPYGDECGTYFSTSFSDGRIVGFHGREGWYIDG IGVHVQEGNLAAPRVSSRSTIEMNPSLRYDMLAQSRSETYNEVPYSMVKEPVPMGPGP WGGEGGRPWDDGVYTGVKQVYVMRGTFIGSIQIEYDRGDQSVWSARHGTSGHITHRIK LDYPHEVLTCVYGYYNTNREEGPRVLRSITFISNRGKYGPFGEEFGAYFSSAKTEGKV VGFHGRSGQHLDAIGVHMQHWMGDRRPAPKYVLSKYLF</aaseq> |
| Gene Sequence |
<dnaseqindica>101..103#608..826#1316..2050#2138..2482#2554..2769#2909..3205#aataaacccatcctgtattagcagattggtaatagcagaaggaggtggcccaatcttaaattcttaattcaagtgtctgggcctatttgggcagcgagatatggtacattcttgtttgctcatgatcttgtgtgcttagttgtgtgttaaattttataaacagatgtatgccggttgccaacaatgcaaaagtgaaattctaagaatgcatactatctgcagaaatgctatgatagaattgtccagaatagagctagcctaatactattgtgacaaataggacttggagtaattttcaagcttgcaaagcctcgggcagttgcttaatcatgggatcatagtgacatgtcgaacttttgtttacgaagtttgcaattggacaactctagattcctagagtttcttcggttcaagaacagaacccacacatcattgctatgatgctatctttttttaattgaaaactctgctatgtgaatttcatgacagtgttttggtttatctagcgatgaagtgcagaaatattattttcttgatgaactgtagtttctagaactcaaactcagatgtcatggtctaatgaaactttggtgtccatgtctaatagagtatcaaaagcagcgacgggaagagccccatagtggttggcccttggggtggcacaggaggatacccttgggatgatggtgtatactcaacggtacgccaggtcatcatcacccatggtgcagctattgactccataaggattgaatatgatctgaaaggaagttcagtctggtcagagacacatgggagcaccgatggaggttctgaaacagataaggtctagtttactatccctgctgcagcttttttaatttttttagcaagattgcaacactccgaaatttgcacaaatttaattggtactgtgcatgtctttagatctatataataaatataagagatttattacgttccttgaggagctaccacattttttagtgtaaattttggtagctcttggtggctcctatgtgttgagataccaggaaacagttgtacctcctcaagtaccataaaatcactacaagtataaacacctatatacaattctggtaaagttggaagatagttttaggccttagctttatgtatgaatctcatgtttattttggcgcataaaatcgatgacatgctgacttgtttttaatgaagttggtaaaagtttatatatcaaaggcctactttgatatccattctactttgaagaagcataatttagttttcatccctaaaacaaaattattgattttatatgtataatctgcaggtgaagctagatttccctgacgaaatccttgtgtctgtaagtggctattacgggtcagtctgtggaactccagttatcataagatcattgacatttcaaagcaatcgttccatatacgggcctttcggtactgaagatgggacacctttctcactcccagtaagcagtggtaaaattattggttttcatggaaggtcagggtcgtatctcaactcaataggcttttatctgaagcaagtgaatgtttcagatcgatcaaattctccagtcttgcctcagagtagaagtattacaagtgcatataacaaaaatggttatagctttcctgagggtgcttcaggatatgacatggtccttgcagtgagagataggggtgacagctatgctgtttatactagcaattaccctaatcagcagtatacaaatccatccccagattacaatgatggaatccgctggaataaggtgccacaaactagtccatcactgcagatggtatcttttcctagtggttacggagatagaggaggtgcagctctgagtagccacgagacctatggtccttggggtggaagtggtggcaccatgtttgatgatggcatgtacaccggtgtgtggcagatcaatttgactcgtgcagtgggaattacttctataaaggtactttatgatcgaaatggccaagcagtgtggggaaacaagcatggattcagtggagctgtttcaccagacaaggtaaatatgatttcagtactgcatttcttttaatttattgtgatgctgcatacatgattgtgatgaagtggaacttttgttcttcagatagtatttgattttccctcggaggtcttgactcatataaccggctactatggcacgacaatgatcatgggtccaacagtggtcagatcactcacattccacacaaacaagcggagatacggaccatatggggatgagtgtggcacgtatttctccaccagtttttctgatgggaggatagtaggattccatggtagggagggatggtacattgatggcatcggggtccatgttcaggaaggtaacttggctgcaccgcgagttagtagtagatcaacgattgagatgaacccctctttgcgctacgacatgcttgcacaatcaaggagtgaaacatacaatgaggtagctacaattcttgtctgaatcataacataagtatgtggctgcagagctaacttgtaaccgttttccaggttccttatagcatggtgaaagaaccagttccaatggggccagggccatggggtggcgaaggaggccggccatgggatgatggtgtctacactggtgtgaagcaagtctatgtgatgagaggcacctttatcggctcgatacagatcgagtacgacaggggtgaccaatccgtctggtctgcaaggcatggaaccagtggccacataacccatagggtgagtactgagtgctattatcaatcaagttccgttgtcaaggaataaaattcatgaaacatacaacaacaatataggatctgttcatcattcttcggtggcatgtcaaacaataacctctctccaaatgcacttgcagattaaactggactacccacacgaggtcctgacatgcgtatacggctactacaacaccaacagggaggaagggcccagggttctgaggtcgatcaccttcatcagcaaccgagggaagtacgggccattcggagaggagttcggggcatacttctcgtcggcgaagacggaagggaaggttgtgggcttccatggccggagcgggcaacacctggacgccattggggtgcatatgcagcactggatgggagacaggaggcctgctcccaagtacgtgctatcaaagtacctcttctgattgagctatggatgaaaacttgaattcctttgaaacaaaaagtgaatacttgaattacatgtagtttagccaatagtcatatagataacagatgggctggtttcgatttgagctttggaggctgtaacattttgggatatggaacagtttaagcctgcggatgagtccgttccttgtactcaggcaggcaggcatatacttaatgcatgacgatttatgagtaaattcaaatgaaattc</dnaseqindica> |
| External Link(s) |
