Os05g0508500

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Revision as of 10:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0508500| Description = Similar to Thioredoxin H| Version = NM_001062531.1 GI:115464792 GeneID:4339267| Length = 4959 bp| Definition = Oryz...")
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Gene Name

Os05g0508500

Description

Similar to Thioredoxin H

Version

NM_001062531.1 GI:115464792 GeneID:4339267

Length

4959 bp

Definition

Oryza sativa Japonica Group Os05g0508500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25225570..25230528

Sequence Coding Region

25225715..25225822,25226931..25227053,25227164..25227298

Expression

GEO Profiles:Os05g0508500

Genome Context

<gbrowseImage1> name=NC_008398:25225570..25230528 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25225570..25230528 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcctcagcggcggcgcaggcggagggaacggtgatcgcgatccacagcctcgacgagtggaccatccagatcgaggaggccaacagcgccaagaagctggttgtgattgacttcactgcatcatggtgcggaccatgccgcatcattgctccagtttttgccgatctagcaaagaagcacacaaatgctgtttttctgaaggttgacgtcgatgaactgaagcctattgctgagcaattcagtgttgaggctatgccaacattcctgtttatgaaggagggagatgttaaagacagggttgtcggtgctatgaaggatgaactggcgagcaagcttgagctacatatggccatgtag</cdnaseq>

Protein Sequence

<aaseq>MAAASAAAQAEGTVIAIHSLDEWTIQIEEANSAKKLVVIDFTAS WCGPCRIIAPVFADLAKKHTNAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDR VVGAMKDELASKLELHMAM</aaseq>

Gene Sequence

<dnaseqindica>146..253#1362..1484#1595..1729#atctttgggaaggcgagccatggccaaggggagcacatagtcagaacaccgcagagcaagtgtgtgtcctgcctcgcgtgaaagataagcggcgctctgctctgctcgccgaggagagagagaagagagagagagagagctagagatggcggcggcctcagcggcggcgcaggcggagggaacggtgatcgcgatccacagcctcgacgagtggaccatccagatcgaggaggccaacagcgccaagaagctggtaattcaaccgtcgctctcctcctctttgttctttcctgtccttttttctttttttgctaagttttttgagttttgtgatcaatggtgtgcgtagctggcctagggtttacttaattgagattatgctcatatccaattttgtgattggggtacctgaggagaaaattttgcgtaatcaaagttgggttttccgcgtctggtttttttttaggattagggtttctctcctccccttccggtggggatacggatctactgttctctcacccgttagaggataattgcagcataaacagttacttctcctttaaactaaccatgtttttaaaaaaaacaaaaaaaaagaagaatcatagttattgtgagaggaaaacgaacaagttgttcatatgctcgtagttggattggtggaaagtagatgatggtagcagcaatgagaaatcgtgggtaactcattagtccttcgttgaggtgtgtaatgatgtttattttccttatgcccgctgattctgtagacggtagaggacacgactattacaaaatacttagcttatttcagaatttcaggtcggtgtttacttcgattataagaaataaattatcacaatttgggatcgacccttatctgtagtgcagtgttgctccaattgttcctgcaggaggtcaaatttgcatgattaacttaaccacactagagcctaaaatcatggcatactttaggagagtgctgaggtcaaatttgcatgattaacttaaccacactagagcctaaaatcatggcatactttaggagagtgctgaggtcaaatttgcatgattaacttaaccacactagagcctgaaatcatggcttactttatgagagccgtatcatgttgcttcagagatgcagatgtttgataagtgaagtttgcaattttgtgtagacttgctgtcctaaggttggtaatagagtccaaaggttgggaactattacagtcacttcatgtatataactatatatgtttttcgataacattttagttctgattgcagtcatttgaattgttgaaatgttgaattagcaataccacaaaagtgtgttaacctggttttcgtcataacaggttgtgattgacttcactgcatcatggtgcggaccatgccgcatcattgctccagtttttgccgatctagcaaagaagcacacaaatgctgtttttctgaaggttgacgtcgatgaactgaaggtattgctgttccccaaattttatatttttatgtagtacagtagtacggttgctgtgttggttttccccttatctggctttatcctaatgaagatttatgtaacaaacagcctattgctgagcaattcagtgttgaggctatgccaacattcctgtttatgaaggagggagatgttaaagacagggttgtcggtgctatgaaggatgaactggcgagcaagcttgagctacatatggccatgtagtgttatagtggattagtactgatatcctaaataaaacgggccttcaggctctgaaaggattagtgcctctgtctgtggtggttttcatatgcttctagtatcaagcattgttcttaccgttgtctagttcatggataatgccttgcttgatccaagtttgtgctttgaatattccaacaaaataatataacctgtgttttgcatatgatggttttctttcaggtgagatatcagaatgttggatccttgagagttgtttagctttcatcatgattagtgaagaaagttgcacatcaccattgtagtaatgtggcaaaccttgttaacttgtgaaaaaaaatgaaaagagtaattcatttggagtctcatttaaattgtttcggtaacaagagtagctcatgtcatcctcaaccatctcaagccactaaaccagtactccattactgggtggtccaaccctataagatcgtgactgtaatttgcacaattgattatttgtgttgattttgaaaccaatcttctctggttaaaatttactatttgcagtcttgcttctttgcctggtcacctccatcccatgcatcatacggtatgtagtatggggcatatccttttcttcactgggtgccgtttcactggtcatttggtcggcagtcttgaagctgctcctcactgatccaggcgtaaagataagctgatctgattgatatctgccaaactcacagacagaagaaaggttttagttctaccaagtactgtactagtagttttgtgcaaccatgagagattcttgtcttccatggagtgccaccgccaagcagcagctatcttgcatcctactccacatcccatttttgttcttgcttcaatccctatctcatcaccttctcgcatggatcaaattcgataagaaatggagtaatcaagatcagtgaaagctaggggagagcttgagcttcttggccggcaatggcgccggcgcgcgggttcgtggagaggctgagcacggtggaagggcggctgctgcggctggaggtggtcgtcctcgccagcgccgtcgtcctggcggcgctggtgctgtacggcgccacccgccgccggagcagcgacaagctcctccgcggcgtgatgtggatggcctactcgctgtcctacgtggtggtgtcctacgccgtggggctgatccaggacgggccgttccgcggcgagacgttcgtgctgtgggcggcggcgctgctgctgatccaggcgagcgcgtacgcggcgccggtgcacagccgccgcgagttcagccagcggaagaagctgctgctgcagcacgtcctccagaccgcgctcgtgctctggctcatcgccaacgccaccggccggaacgccagctaccgggccgcgatctgggcgttctggtgcctcaacgtcctcaagacggtggccaagatcgtcgagatgatcaaggccagcatccccgaccagtccgtcaagctgatcgccgactacatggacgtcgaggagtcgctcgccggtgtcggcgacggcgagccgccggacccgacgacgatgaagggctacaggtacatcttccacggcgaggacaccatggtgccggcgacccgcgacgacatggtgaggcagagcgacggcaagtcggtggtcaccatcgaccgcgtgtaccggtggatcgacgacgagcccgggtacagcggcgtggagaaggacatggcgagggacttctgcctcgcgttcgcgctgttcaagctgctgaagcggcggttctacggcttcgtcccggcggaggccggctcgccgagggcgcgggacctcgtctgcggcggcctcatccggccggccgtcacggggcccgacgccgcgttccgcgtcgtcgaggcggagctcgcgttcctctacgacgagttctacacccgcaacgtcgtgctcgtcggcgccaggacctacgtctgcatcgccgccgccgtggccgggatcaccatgtggacggcgttcttcggcacgctcggcccgggctaccaccgcctccgcatcggcgtgcgcggcctcgaccgctccgtcacggtgctgatcgtcgtgatcaccgccggcctcgagctctgccaggcggtggccggcttctccagcaactggaggtacgtcaagacggtgtaccgctgcgtgcgcgacgaccagccgtggacgaacaggcggcacggccacctctggtggaaggagagcatcacgccgccggcgacgaggtactgggacgacaaggtcggccagtacgtgctcctcaagcggttcggccaccggccatggaacatcctgtcgtggctgacgctctacctggtggagccgcggcggcaggggcagaagcgcggccggaggaagcgcctgccgcaggaggtccggcgagcggtgctcgtgtcgctcaaggcgagctacggccacctcaccaatggcgtctccacgctgcggaggcacggcctgacgccgcagctggagtgggcgtgcgcgttccccaagctcaccgaccagatcctggtgtggcacgtcgtcaccacccgcttagactggacgagcggcggcggccatggccggagccgccgccgcgacaacggcggcgacgtgaacagggtcgtggcgacgaagctgtcgaactactgcgcctacctggtcgcgttcgtgccggagatgctgccggacccgagctacaacgcggagcagatgttcgacacggcggtgcagcaggcgagggaccacctgggcggctgcaggacggagagcgccgtgctccagaggctgcaggagatcgaggacgaggagcggcgcggcgccgtgcgcgagagggcgggcagcgccaccgtcatcgagaaggcggcgctgctcggcgggcagctgagggcggccgtggacgaggcgcggcggtggcaggtgctggccgagttctgggcggagttcatcctgttcctcgcgccgtcggacaacgtggacatccacgccgaggtgctcggcgccggcggcgagttcatgacgcagctgtgggcgctgctctcccacgccggcgtcctggaacggccggccgtcgccgcgacgccgtcgccaccgacggtgtgatcagattgatcgatggttatgttcgagatcgtgcaagctagataggggatgcaaatttagttgctccatccatgaattcattttatattttgaaacatcattgaacgatttagtaattagtttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0508500, RefSeq:Os05g0508500