Os10g0407000
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os10g0407000 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001071102.1 GI:115481947 GeneID:4348589 |
| Length |
2312 bp |
| Definition |
Oryza sativa Japonica Group Os10g0407000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:14290363..14292674 |
| Sequence Coding Region |
14290499..14290661,14290784..14290957,14291128..14291315,14291403..14291480,14291594..14291698 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008403:14290363..14292674 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008403:14290363..14292674 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgcagcagcagccgcggcgagttctccgcgtggcgccgccggggcgaggaggggcgcgcgcggaggcggagcggggggaggagggggaggcggtgttcgcgacggtgcaggcggcggtggacgcggtgccggtggggaacagggtgcggacggtgatccgcctcgcgccggggacgtacagggagcccgtctacgtcgccaaggccaagaacctcgtcaccctctccggcgaggccggctcgcccgaggccaccgtcatcacctgggacaacaccgccacccgcatcaagcactcccagtcgtccagggttattgggacaggaacgtttggatgcggaacaattattgtggagggggaggatttcatcgcagagaatatcacatttgagaactcagctcctcaggggtctgggcaggcagttgctctccgagtaacagcagataggtgtgccttctacaattgcaggttccttggttggcaagacacattatatttacattatggaaaacaatacttaagggactgttacatcgaaggtaactgtgacttcatcttcggcaactctattgccctgttggaacattgccatattcattgcaaatcagcgggttacattactgctcacagccggaaatcctcatcagaaactactggttatgtgttcttgaggtgtattattactggaaatggagaagctggatatatgttcctgggtcggccttggggaccgtttggaagggttgtctttgcgcacacttttatggatcgttgtattaagcctgctgggtggcataattgggacagatctgagaatgaacgaactgcttgcttctttgagtacaggtgctcagggccaggtttccgcccatcaaaccgagtggcttggtgtagacaattgcttgatgttgaagtggagaatttcctttctcactctttcattgatccagaccttgataggccttggctcatccagatgatggcaataaaagtaccagtctcagcatag</cdnaseq> |
| Protein Sequence |
<aaseq>MAQQQPRRVLRVAPPGRGGARAEAERGEEGEAVFATVQAAVDAV PVGNRVRTVIRLAPGTYREPVYVAKAKNLVTLSGEAGSPEATVITWDNTATRIKHSQS SRVIGTGTFGCGTIIVEGEDFIAENITFENSAPQGSGQAVALRVTADRCAFYNCRFLG WQDTLYLHYGKQYLRDCYIEGNCDFIFGNSIALLEHCHIHCKSAGYITAHSRKSSSET TGYVFLRCIITGNGEAGYMFLGRPWGPFGRVVFAHTFMDRCIKPAGWHNWDRSENERT ACFFEYRCSGPGFRPSNRVAWCRQLLDVEVENFLSHSFIDPDLDRPWLIQMMAIKVPV SA</aaseq> |
| Gene Sequence |
<dnaseqindica>2014..2176#1718..1891#1360..1547#1195..1272#977..1081#55..357#gtgaaaccgccaccgccaacccaaaccaaacaaagccgcgccgccgatctcgccatggcgcagcagcagccgcggcgagttctccgcgtggcgccgccggggcgaggaggggcgcgcgcggaggcggagcggggggaggagggggaggcggtgttcgcgacggtgcaggcggcggtggacgcggtgccggtggggaacagggtgcggacggtgatccgcctcgcgccggggacgtacagggagcccgtctacgtcgccaaggccaagaacctcgtcaccctctccggcgaggccggctcgcccgaggccaccgtcatcacctgggacaacaccgccacccgcatcaagcactcccaggttagtacgctcgcctcctgctcgatgaaatgccaaactcggagatggccttgaacaattttagtgattctcttcccgattattgacaggtcccgagaaattgttggtgtatgtagcatgcgttgcgtaaattatttggagagcttttagaatggtttgtttgtttgattcgttcatcccgtcattggctatagctaggatggtgaggcactgacgcattaagaaatgtctggtgtgcgttttatttatgtatatccctgtgtactgagcacactggtttcggatgacacccccatatcgatccatttggagtatgttaatatgaatggataggtggtttgagcaaattgtatgttaaattattgtacctctgtagtttattatgtgtttatgaggaaggggtaggtgcagagaacttccaactgaggtttacaagacttcttctccaaaagcaatgaaaggaactttacatttgagcttgttagaaaaacatttgacgttttagtagacgagtccgtaactgccccctaattttgactgcagatgttaagtgctgtgtactttgaatagttatgcttatctttttaatttaatcattctgtccttttctcttgtaaagtcgtccagggttattgggacaggaacgtttggatgcggaacaattattgtggagggggaggatttcatcgcagagaatatcacatttgagaactcagctcctcaggtgcttgtctttgccttgttcttttttcttttgaccaaacttgttcttcttgcatagagagatgcatgtgtgatgagtgggtgcagaaagctgatgtgcctgttgtggtgtaggggtctgggcaggcagttgctctccgagtaacagcagataggtgtgccttctacaattgcaggttccttggttggcaagtacgctcatttattcacctcttcattaaatcgtttcattcagcgaagcttttgttaatttatgaggttgtcgaataaaacattcaggacacattatatttacattatggaaaacaatacttaagggactgttacatcgaaggtaactgtgacttcatcttcggcaactctattgccctgttggaacattgccatattcattgcaaatcagcgggttacattactgctcacagccggaaatcctcatcagaaactactggttatgtgttcttgaggtgagttgtttcattgtatgtttacttagtccgttaggccatgctgttcatggctgaaatttgagtttctcattgcttgtgtaataagattgacatgtaagcttgatcattttcaatgtgcctttcttgcttttgcttgatgtgatgcttggacggatgaacacatgcaggtgtattattactggaaatggagaagctggatatatgttcctgggtcggccttggggaccgtttggaagggttgtctttgcgcacacttttatggatcgttgtattaagcctgctgggtggcataattgggacagatctgagaatgaacgaactgcttgcttctttgagtacaggtattggaaccatcagtattcagagattcttctcttactaaacttccatattatctgtggacttgtgcttatcgatcattcatgagctactagaaggcattaacccttttttttttacgcaggtgctcagggccaggtttccgcccatcaaaccgagtggcttggtgtagacaattgcttgatgttgaagtggagaatttcctttctcactctttcattgatccagaccttgataggccttggctcatccagatgatggcaataaaagtaccagtctcagcatagtctaatcccaggattgtagttcatccctcctccctagtctatcttataaataattttggagggtgtattataagtgtaacatttggtcaacttgtgcccacgcaattgtattgaggagagatatttgttgttttcc</dnaseqindica> |
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