Os05g0509700

From RiceWiki
Revision as of 10:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0509700| Description = Single-strand binding protein/Primosomal replication protein n family protein| Version = NM_001062539.1 GI:115464808 ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0509700

Description

Single-strand binding protein/Primosomal replication protein n family protein

Version

NM_001062539.1 GI:115464808 GeneID:4339275

Length

4758 bp

Definition

Oryza sativa Japonica Group Os05g0509700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25316225..25320982

Sequence Coding Region

25318614..25318630,25318797..25318856,25319112..25319212,25319350..25319558,25319644..25319807
,25319889..25319958

Expression

GEO Profiles:Os05g0509700

Genome Context

<gbrowseImage1> name=NC_008398:25316225..25320982 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25316225..25320982 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaattctctcagcaatggattactgaagggcttgaggagggtcttagaacagcagagaaaaccaattgatttctacagaaaatctcaagcttggagttctactgtttccttttctgatattgatgagaagagtgaaatgggaggtgatgatgattatacagattcaagacgagagttagaaccccaaagcgtagaccccaagaagggctggggattccgtggtgttcacagggctataatatgcggaaaagtcggacaggttcctgtgcagaaaattttaaggaatggtcgtacagtgactgtttttacagttggaactggtggcatgtttgaccagagggtagtaggggatgcagatctgccaaagccagctcagtggcatcggatagccattcataatgaccagctaggtgcttttgctgtccagaagctggtgaagaattctgcagtttatgttgagggtgatattgaaaccagagtatacaatgacagcattaatgatcaagtgaaaaatataccagagatttgtcttcgacgcgatggtaagattcggctgattaaatctggcgagagtgctgctagcatttcattagatgagctaagagaaggattgttctag</cdnaseq>

Protein Sequence

<aaseq>MNSLSNGLLKGLRRVLEQQRKPIDFYRKSQAWSSTVSFSDIDEK SEMGGDDDYTDSRRELEPQSVDPKKGWGFRGVHRAIICGKVGQVPVQKILRNGRTVTV FTVGTGGMFDQRVVGDADLPKPAQWHRIAIHNDQLGAFAVQKLVKNSAVYVEGDIETR VYNDSINDQVKNIPEICLRRDGKIRLIKSGESAASISLDELREGLF</aaseq>

Gene Sequence

<dnaseqindica>2353..2369#2127..2186#1771..1871#1425..1633#1176..1339#1025..1094#ataactcaaccttttgatctcgctacgaagctcctccgctccacccaggcacgagcgccgccgcggccgactccaccggacaccacccaacgccgccagccgcctcctcccatcctccctcgatccgtacggatagcctccccgctcgctcggtctgcgcccgtcgtcgtcgtcccgccgtcttatccctcccgcgactcggcgacgcgcgaaggcctccggcgcggggctgaaggtacgtccttttcccgagctcgttctactgttccaactctgccatggctgcagttttccattttgggctgggtctgccactgttctatggggtatgcaactgttgtcgacgtcgcgtgaagcccctgaatggccagtgtgcgatgcttgcaaggtgtttgttaaaatgtctcggtagaatatcttggaccgtttgcatattttatccatgcaaagtttagtccagtaggctgttaatttttctgtgattgcctatttagattttaggtggtgttaattcagcctcctgaagagggtggttattggatactacgatcctagaatgccgctgcagcttagctaggcggatcagccgcttaggcaggtagagcagcttccttgtcttggccggatgtcgtccctgaggttccaacggaatggagctgctgtagctgaataagaccataagttgtttttgtgcaggaaagaataagcagaactgtcatggaactcctctgcactgttgagacaaacctgggatgcctcatcataaagaataagtgtctcccacgtgataggccatcctgatgcaccttatttcctcatgtagttttttccttgtagaaggtcacactgaacaaatgcttttgagaatagaactgctaccaggaaaatgttgaatgaagttgacgactgtgatgtttatgttgttttgaaatccattaaaggaataggaaaaaaatatatgttctgatgattatttttatgattttattatttaacgtttttcctcaatgtgcgtagatttaccatgaattctctcagcaatggattactgaagggcttgaggagggtcttagaacagcagagaaaaccaattggtgggttgtttttcatggttgtttcaagatttctactcagtttttactgagtaagttttgattaaatatttgtctgtgtagatttctacagaaaatctcaagcttggagttctactgtttccttttctgatattgatgagaagagtgaaatgggaggtgatgatgattatacagattcaagacgagagttagaaccccaaagcgtagaccccaagaagggctggggattccgtggtgttcacagggtatttaagtataatatgaaaaggatacttcatgttttggttttcaagcttaacttggtattaattgattgtttcaactttctaggctataatatgcggaaaagtcggacaggttcctgtgcagaaaattttaaggaatggtcgtacagtgactgtttttacagttggaactggtggcatgtttgaccagagggtagtaggggatgcagatctgccaaagccagctcagtggcatcggatagccattcataatgaccagctaggtgcttttgctgtccagaagctggtgaagaagtacgtggtttcagtgagaagatcaccctttttcttttctccatacaagtatacaactatataccatttcctagttctatggcttgaaattcttttttactgtggttggtgctgtctttgttcttgccttatttcagttctgcagtttatgttgagggtgatattgaaaccagagtatacaatgacagcattaatgatcaagtgaaaaatataccagagatttgtcttcgacgcgatggtatgttgatctgccattccactagaaactttgtggtagtaatattttatagcaagaataaataacgtttgaagtttgaacaattttctcggggtaactccataactctgttaccaaactggacacagaagcctgctgctttgtttaattatactgcatttgagtaatgttgatagctattcttttgtacttatttattttgattgtctttgttgttgtaaaagcttatccttggaaaaatatttatatgtacaggtaagattcggctgattaaatctggcgagagtgctgctagcatttcattagatgagctaagtaagttcactgaaaaccttaatattctgatttatgagaatcttgcattacttgtatttgttgtgattatgcaactatgattggtctccacaattatctgcatgcagatgtccagtgttttagattttagtatttaccatttaatcatgacaacctttgtatgcaggagaaggattgttctagtttgaaagatctcagcacaagcaggccaggagtacaggcatgtttcaactcttttgttgattgttttaacagtattaggattttgacttctaagaagtgtccatgcaccctgttagctgtgggtcatgtgttttttattaatttgaacttgaaatgtgcatattgtgaattatctgtagaacaccttcagctttcaatcaagcatttccctgccaatacttatctgtcattgattggtgcctcgtgctatctttcagtagaaagtgatattttgatgcctttaccaggctcatttcttcataagtttctcatagcgtggtattttacttgtatcgcgtcttcatcttaatgaaatatgttgttacaacttcagcttgttacataagggtgattacaaattataagaaatgtcatagattcacggatcttgcgaatcaaatattacaaacctggaatggtagagtacctaattctatttatatttcttcactctatttgtacatgttgctgatagattctccctggggtatttgtacatgaatagttgcacagtgacaatcttaggccaatttgttcaatgattttaagaatgtaagacactgaaccataactagtctctagttggtggaataaaagtgatcacttgtcattattaattttcatcatagatcatcaaaatcaattaggtgagaaacaaacctctgagtaaatattctcgagtggcgaagaagaacacaggataacctgcatgttcacacaaaagcatagtatctcttgtcaacgaagtttgtagatcttcatgctgaaatgttgtgatcttgaaacttattcatatgaccaaattgtatttacacttgacatgttgccagggaatataaaaggtaatactagtaaattaactgttgagtaggttgagagaaatcttacatcagtcacacccttatctaaaagcataattctgatgttcttcgctttggaaccttgtcaattgtcaccaagtaagaatgggtgtgcttttgatggtatttcaggctttaccttatcctttgacctctttctgagcatctccttcatgccatccgccaccttgactgcagggcttgatagtgccatcctgcagaatgccatatgagctttgatagcatcttcgatgccatcctgttctcttctgtctttactgagctcatcccctaccgcctctgagcataagccacaaagccatttccctccgaagtttgccttgacattctctatgtattcctgggtgcaatcctcttccaggccacagcacgcacacctcactgattcaatgtccatcttcaatgctgatgcctgatggaaagaggactaaaagaacaatagtagatgcatgggagtagagaaggagaaagaaggtgggagaaggcaaatagaaggaaacagtatggagttcaggactaggttgctgcttgtgtggataatttttgtagacctctccttccttttggattggcttgtttagcttggtatgttattgaaattttgagatttgcccagacccatagtatcttcaacagtgtactacctcgtgaaagaataagaaagataatatgatttttttgatgcctaccagtttcctaggtaaaaatataggaaaccgtagttcacatgactgcaactgtgttgaaggtaaaggcaggagcaggttcccatagcctgaattagctagtacagttttgtttttcctgtgtgaagacgcacgatggatgacaaataaacatgctataagatccaaatgaaaatgcaaaagaaaagttattcccatatctaaaaattgtatacttgatcacatgcggtcaattagccatctacatatgcacattacaaagaacacaacacaagcttatctacctttagtgaaggagtgggggcatatcaccatcacattagcttatccttttacgacagtataaatttcaatgattttgttttatataagtctttacatgatgatgtctttaaaggttgttacatgcctaatatgtgtgatatatactagaaatgtcagacacctggtttctaacgcaacaaccttgtttaggttgattactgaaatgtcgcactcctaatattagtcgcatcgccttcgtttgtacgtatatacttttctgggcaggtcgtaacctgtttatctgtgcattattaggttcaaaagataaagtggatacgtgcaggctcaacgatgatgctggcctctcaaagaaaagaaaaacgacgatgctgcttcaccgaagcgaaatttgttgtagcaggcatgtgaaccttgtcctggccgcccttccagtcgtattttcattatcaacatcctttaatgtactcttgattaacatcttagcagtcaaatttacag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0509700, RefSeq:Os05g0509700