Os05g0511050

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Revision as of 10:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0511050| Description = Peptidase A1, pepsin family protein| Version = NM_001187556.1 GI:297724242 GeneID:9271549| Length = 1299 bp| Defini...")
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Gene Name

Os05g0511050

Description

Peptidase A1, pepsin family protein

Version

NM_001187556.1 GI:297724242 GeneID:9271549

Length

1299 bp

Definition

Oryza sativa Japonica Group Os05g0511050, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25378279..25379577

Sequence Coding Region

25378279..25379577

Expression

GEO Profiles:Os05g0511050

Genome Context

<gbrowseImage1> name=NC_008398:25378279..25379577 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25378279..25379577 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgataataaactccacaagatttgacttcttggacatcatagaaccagtaacaacatatacagatggctaccttctttccctaaacctgggcatgcccccacaggtttttcaggtgtacttggacacagggagtgacctcacttgggttccttgtggcaccaactccagctaccagtgtttggagtgtggcaatgagcatagcacctccaagccaattccatccttctccccatctcagtcctcttcaaacatgaaggaactatgcggcagccgcttctgtgtcgacatccatagctccgataactcccatgacccctgcgctgcagtgggttgcgccattccttccttcatgagtgatctatgcactagaccctgccctcctttctcctacacctatggtggtggagcactggtccttggctcccttgcaaaggacattgtaacactccatggaagcatatttggcattgccatcctcttggatgtccctggcttctgctttggctgtgttggtagctccataagggagcctattggcattgcagggtttggcaagggcatactctccctgccatcccagctagggtttcttgacaaaggattctctcattgcttcctaggattccggttcgcgaggaacccgaacttcaccagctcgttgatcatgggtgacctcgcgctgtctgcgaaggacgacttcctcttcaccccaatgctgaagagcatcactaacccaaacttctactacattgggctagagggtgtcagcattggagatggtgccgccattgctgctcctcccagcttgagcagcatcgattccgaaggcaatggcgggatgatcgtcgacactgggacgacatacactcacctccctgatccattctacaccgcaatcctatcatcccttgcctctgtcatactctatgaaagatcttacgacctcgagatgaggacggggtttgatctctgcttcaagatcccttgcacacacaccccatgcacacaggatgagctgcctctgataaactttcacttcctcggcgatgtgaagctcacgctgcctaaggacagctgctactacgcggtcaccgcgcccaagaactcggtggtggtgaagtgcttgctgttccagaggatggacaacgatgacgacgacgacgatgttggtggcgcgaataatgggccaggagcagttcttggaagcttccagatgcagaatgttgaggtcgtctacgatatggaggcagggaggattgggtttcagcccaaggattgtgcccttcactcctag</cdnaseq>

Protein Sequence

<aaseq>MVIINSTRFDFLDIIEPVTTYTDGYLLSLNLGMPPQVFQVYLDT GSDLTWVPCGTNSSYQCLECGNEHSTSKPIPSFSPSQSSSNMKELCGSRFCVDIHSSD NSHDPCAAVGCAIPSFMSDLCTRPCPPFSYTYGGGALVLGSLAKDIVTLHGSIFGIAI LLDVPGFCFGCVGSSIREPIGIAGFGKGILSLPSQLGFLDKGFSHCFLGFRFARNPNF TSSLIMGDLALSAKDDFLFTPMLKSITNPNFYYIGLEGVSIGDGAAIAAPPSLSSIDS EGNGGMIVDTGTTYTHLPDPFYTAILSSLASVILYERSYDLEMRTGFDLCFKIPCTHT PCTQDELPLINFHFLGDVKLTLPKDSCYYAVTAPKNSVVVKCLLFQRMDNDDDDDDVG GANNGPGAVLGSFQMQNVEVVYDMEAGRIGFQPKDCALHS</aaseq>

Gene Sequence

<dnaseqindica>1..1299#atggtgataataaactccacaagatttgacttcttggacatcatagaaccagtaacaacatatacagatggctaccttctttccctaaacctgggcatgcccccacaggtttttcaggtgtacttggacacagggagtgacctcacttgggttccttgtggcaccaactccagctaccagtgtttggagtgtggcaatgagcatagcacctccaagccaattccatccttctccccatctcagtcctcttcaaacatgaaggaactatgcggcagccgcttctgtgtcgacatccatagctccgataactcccatgacccctgcgctgcagtgggttgcgccattccttccttcatgagtgatctatgcactagaccctgccctcctttctcctacacctatggtggtggagcactggtccttggctcccttgcaaaggacattgtaacactccatggaagcatatttggcattgccatcctcttggatgtccctggcttctgctttggctgtgttggtagctccataagggagcctattggcattgcagggtttggcaagggcatactctccctgccatcccagctagggtttcttgacaaaggattctctcattgcttcctaggattccggttcgcgaggaacccgaacttcaccagctcgttgatcatgggtgacctcgcgctgtctgcgaaggacgacttcctcttcaccccaatgctgaagagcatcactaacccaaacttctactacattgggctagagggtgtcagcattggagatggtgccgccattgctgctcctcccagcttgagcagcatcgattccgaaggcaatggcgggatgatcgtcgacactgggacgacatacactcacctccctgatccattctacaccgcaatcctatcatcccttgcctctgtcatactctatgaaagatcttacgacctcgagatgaggacggggtttgatctctgcttcaagatcccttgcacacacaccccatgcacacaggatgagctgcctctgataaactttcacttcctcggcgatgtgaagctcacgctgcctaaggacagctgctactacgcggtcaccgcgcccaagaactcggtggtggtgaagtgcttgctgttccagaggatggacaacgatgacgacgacgacgatgttggtggcgcgaataatgggccaggagcagttcttggaagcttccagatgcagaatgttgaggtcgtctacgatatggaggcagggaggattgggtttcagcccaaggattgtgcccttcactcctag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0511050, RefSeq:Os05g0511050