Os10g0452800

From RiceWiki
Revision as of 21:09, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0452800

Description

Similar to Rev interacting protein mis3-like

Version

NM_001071272.1 GI:115482287 GeneID:4348775

Length

3747 bp

Definition

Oryza sativa Japonica Group Os10g0452800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16966302..16970048

Sequence Coding Region

16966814..16966933,16967033..16967113,16967191..16967334,16967683..16967764,16967857..16967939
,16968033..16968137,16968247..16968285,16968382..16968438,16969079..16969147
,16969337..16969447,16969548..16969624,16969723..16969942

Expression

GEO Profiles:Os10g0452800

Genome Context

<gbrowseImage1> name=NC_008403:16966302..16970048 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16966302..16970048 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcggaggagggggaagaagcgaacgccgcgtcgtcggcggaggaggtggggaggaagaagccgccgcggcacaaggggaagcacgacaagccgaagccgtgggacgacgaccccaacatcgaccactggaagatcgagaagttcgacccctcgtggaacgagggcggcatgctcgaagtcagctccttctccaccctcttcccccagtaccgagagaagtacctgcaggaggcgtggccgattgtgaagggcgcgctgaaggagtttggggtcgcttgcgagctcaatctggtggaaggatccatgaccgtttcgaccacgcgcaagaccagggatccctacattatcgttaaggccaaggagctgataaaattgttgtcgaggagcgtccccgctccacaggcgattaaaatactcaacgatgagatgagctgtgatattatcaagattggtagtattatacggaacaaggaaagattcgttaaaaggagagaacgtcttctgggccctaatttatctactctcaaggccatcgagattttgactggctgctacatcttagttcagggaaacactgttgctgctatgggttcctggaagggattgaaacaagtccgaagggttgtggaggactgcataaagaacatcaagcaccctgtgtaccacatcaaggaactcctaattaaacgtgagctggccaaaaatcctgcgctagccaatgaaagctgggacaggtttctcccgaagtttaagaagaaaaatgtcaaacaaaagaaaccgataacaaaggagaagaagccatacacaccctttccacctcctcagcaacctagcaagattgatcttgaacttgagagtggtgagtatttcatgagtgacaaaaagaagtccgcaaagaaatggcaagagaagctggaaaagcaatcggagaaagctgaagagaacaaaagaaagagagaagctgcatttgttcctccaaaggaggacactgcaactccatacgaatctgccaagtctaccagcaacaacgacgagattgctgatatggctaagtccctaaagaagaaagcaaaggaattcagaaagagtgaagcacaggaaaatgtgagactcgagtcttatgttgcaagtaatgaagggtcacgcccaaaaaagaagcacaaatcgtccaagtccaagtaa</cdnaseq>

Protein Sequence

<aaseq>MASEEGEEANAASSAEEVGRKKPPRHKGKHDKPKPWDDDPNIDH WKIEKFDPSWNEGGMLEVSSFSTLFPQYREKYLQEAWPIVKGALKEFGVACELNLVEG SMTVSTTRKTRDPYIIVKAKELIKLLSRSVPAPQAIKILNDEMSCDIIKIGSIIRNKE RFVKRRERLLGPNLSTLKAIEILTGCYILVQGNTVAAMGSWKGLKQVRRVVEDCIKNI KHPVYHIKELLIKRELAKNPALANESWDRFLPKFKKKNVKQKKPITKEKKPYTPFPPP QQPSKIDLELESGEYFMSDKKKSAKKWQEKLEKQSEKAEENKRKREAAFVPPKEDTAT PYESAKSTSNNDEIADMAKSLKKKAKEFRKSEAQENVRLESYVASNEGSRPKKKHKSS KSK</aaseq>

Gene Sequence

<dnaseqindica>3116..3235#2936..3016#2715..2858#2285..2366#2110..2192#1912..2016#1764..1802#1611..1667#902..970#602..712#425..501#107..326#actcctctcccccgccgccgccgtccgaccatccgaccaccgccgccgtccccctcgacgccgaccaccccttcggccgaagccacctccactacttcccgccgccatggcgtcggaggagggggaagaagcgaacgccgcgtcgtcggcggaggaggtggggaggaagaagccgccgcggcacaaggggaagcacgacaagccgaagccgtgggacgacgaccccaacatcgaccactggaagatcgagaagttcgacccctcgtggaacgagggcggcatgctcgaagtcagctccttctccaccctcttcccccagtaccgaggcaagtcgcggttcgattcgatttgatagaaatccccaagtcccaagatgatgtgaaaatttcacgaggttttgcttgtccggattggatggatgcagagaagtacctgcaggaggcgtggccgattgtgaagggcgcgctgaaggagtttggggtcgcttgcgagctcaatctggtacggcgatgagccgatgagtgataagacattattggtgatattcttcagtttattctgcgggtgagatttgagatatccttttttgatgtttgtgtaggtggaaggatccatgaccgtttcgaccacgcgcaagaccagggatccctacattatcgttaaggccaaggagctgataaaattgttgtcgaggagcgtccccgctccacaggtgttaatcactctctttgtatccactgcattgagtcatttagattataggaaaatgtgagagctaatttagatttctagtattcaggtataatatgtccttaccacatgatgctaatattgtgttgctgacctacgcttgctttgtgtaagacttgttttgtcgctaaacctctgatgaattttgcaggcgattaaaatactcaacgatgagatgagctgtgatattatcaagattggtagtattatacggaacaaggtaggctattccatcatggtttaatatcaatttgcctcctaatattaactttgagtaagtcatcagttgcaaatatccccactcatgtacgtttaaataccagcttttgttagtcacgtaatataatcatgataccgagcgcataaggatgttggaaaacattctgcccattcctcatgaggctcaactcaattcttgtttccaaatagctacatctgttactgaatgtttcccatgatgttattgccaagatggtcaccttatagtttgcagctttgtattttcatattaggactctgttccttgatccaagatttagctattctgacgtttatggattttcttgttgtacataaatacgtaatctgaagcacctgcatcacatattcacgggttctgtgctaagttatctgtattgtcttgtaaatacaaaaagacaaactggtttaacgagctacagcctacaacatatggtttctttaattagtctgatttaacttattgtgtaattttttacatgattacagcttgccatatggtaaataatgcaatcatcacctcttcatcctatgtttgtcggtcactcagtcttgatgaattttacttactctacagcctgctcataatgtgccatctgcaggaaagattcgttaaaaggagagaacgtcttctgggccctaatttatctactctcaaggtaaactgcttgtaatatgttcaattttgatacatctcattattggaaggttagaaaaaacatccctttgttctcatgctgttttatgaactgcaggccatcgagattttgactggctgctacatcttagttcaggttttccaatacttcttactttatgtgctacatttaaattttcattgtgggataacctcctttttactctttatatcaactgatttgattgctattgctatattaaaagggaaacactgttgctgctatgggttcctggaagggattgaaacaagtccgaagggttgtggaggactgcataaagaacatcaagcaccctgtgtaccacatcaaggtaacaggttttgtttctcagatgtttgattcaaggaatgttcctacagaactattgttgattattacttatattttctgttaaactacataggaactcctaattaaacgtgagctggccaaaaatcctgcgctagccaatgaaagctgggacaggtttctcccgaagtttaagaagtaaggaacttgcatcatctttgttaagacgtttagtgctactgacaattattctaaaggccttatacatcattgcttttgctgttcctcaggaaaaatgtcaaacaaaagaaaccgataacaaaggagaagaagccatacacaccctttccacctcctcagcaacctagcaaggtgaagtaatttctttatgtttaaactcgtttgtagtgtcaaacttgtactgtttgttatactggttttgaccagcatatgagttgtgattagtagtccttccttgcttcctacaacttgtgtatttatgcaggttgctctgttcatattcattttatttgtatagaagattagtgtatttcttttgctacattataatttggtgaaaacagcatccatgggtcatgtgtttttcctctttcctcgttgcctaatgatatgcttgtagtgcaagtgtagctactgctggctatttgctttgggtactgcaataccattttattgaacgtttcattctgggtgttgtagattgatcttgaacttgagagtggtgagtatttcatgagtgacaaaaagaagtccgcaaagaaatggcaagagaagctggaaaagcaatcggagaaagctgaagagaacaaaagaaagagagaagctgcatttgttcctccaaaggtttagaatattcttatttgtgtattttcaggattatcttcctcattttggttctaaataataacaatttgtttcaggaggacactgcaactccatacgaatctgccaagtctaccagcaacaacgacgagattgctgatatggctaagtccctaaaggtaaacactgtttcgttcttattaatttcttgggagcgtgacatgtttaccgtaattagaatggtcatctcataatatgtgaatctgctcaatttgcagaagaaagcaaaggaattcagaaagagtgaagcacaggaaaatgtgagactcgagtcttatgttgcaagtaatgaagggtcacgcccaaaaaagaagcacaaatcgtccaagtccaagtaatcgcaacctgaatgaaccatgacccccggttagtgtgacaactttttctagccaaatcatgctagcagcatcccattcaaagttcctgatggcgattgaacaaaatttgcggccttttggctctctgcttgttgtaaaagtagttgtcatctgtatgggttgtgtaactgtttgtgcccaatatgccgtggagtagctctgatctgcttgtctccttggggtagctctgatggctcgtgatgagagttgagacagcttctccatgtagatcagagctacaacgtgatgtagacatgagcatcttcgctggtgcagcagtctgaactgtcatgtcgttgccttgcctctttgtgaaagtcacaaagacaatgcatcatcgacaaatttacacccagcaacggtctctgcctcgtcgatcgcctatttgccttttctacctagaactcaaatgactgaaactgaaactgaaagccaatcaatcatatactgaaaacctgctagtttgttgctct</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0452800, RefSeq:Os10g0452800